BAC Information

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BAC

Clone NameB6Ng01-201C23
Chromosome13 (Build37)
Map Location 12,621,065 - 12,755,502
singlet/doubletdoublet
Overlap geneEro1lb, LOC664862
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd
Downstream geneEG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-201C23.bB6Ng01-201C23.g
ACCGA022033GA022034
length1,0271,031
definitionB6Ng01-201C23.b B6Ng01-201C23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,754,474 - 12,755,502)(12,621,065 - 12,622,035)
sequence
gaattcccaaggacagccgggtgtggtggcacacgcctttaatcccagca
ctccggaggcaaaggcagtcggatttctgagttccaggccagcctggtct
acaaagtgagttccagaacagccagggatacacagagaaaccctgtctcg
aaaaaacaaaaaacaaaataaacaaaaaaagaattcccaaggacaggtaa
taaaaatactatgccaacagtatattaatttcttacaaagttgttacttt
ttggggggcatgggaagagaggaagacggggtctcatacctggcctgaaa
tttactatgtaacttgaggatgaccttgaactcagcatccccctccctcc
actccccaagtgtgtggactccagggcacattcctcaatgctggggctgc
aggcatgtgcagcattgcctggctttttaggtgggtgctgtgggtttgaa
ttcaggtcctcaagcttgctgagcaaacactcttacacaccaagtcatct
ctccagtccccaatttctcactgttgaaggcatacatgaaataatcaagt
aagacctacacaatatggtaagctattcattaccatctggcctccccagt
tagggaatcatatttctgaagtaaaaggtcccaccataggaggaggaact
gcagatacaccattgtcgtgttctcagttggtttttgtcactgagatgtg
gctgaggctctcttaatttgacacccttgccccaaactgagttggaagct
catgactcaaagatgaggaactgcatagtcttgttctagagagaggagct
ctcccaccacctttgacaacccctttactcccccacctcccgtatagata
ttaactgggccaaatatgtgcctcttgctaccactgtatgtctagatgga
ataggtgtgttcctgagagattcacctacaagccagattgtggtttctcg
tgaagcctcgccttcttgatatagaaacttggtatagctggacagcgatg
gcgcatgccttaatcccagcacttggg
gaattctgtttcttgtcctggatttggggttgggatcaagtccgggtcag
ggtactctttccatggccctggtcttgggatcaaggaaggatcaaggtgc
ttttcctttgcccttttatgccatacaaacagggtgggtacagaggccag
aggaggactctgccttagatatttgagacctggagtcaggcaggtaacca
gcaagcttcagtggttcttctgtctccatccaacattgtcctggggctac
aagtcagtacacagccacatgtggccacatctgtctcttttaaaactttt
aaattatttttatttatagggatgctgggatctcaggtctagtgcttgtt
caacaaatgctcttaccaactgagccatatccctagccccttgggagttt
agtaaagcacagtatatcttatccaaatggggctgttatggtttgaatgt
gaagtcactcacaggtgttacaggatatttgaaactgcttctagttaggg
tggggctcagcctgtggcatacacctttaagccctcttgctggaatacag
acacacccttggtactcatctttaatcccaaaaggaagcacacatgtttg
aaagtgatatctaattgagtggcagaaaaagtgatgaatcagggaaagag
ttgcagaataggatatgcccaaccctcccaggaagaaaggaaagggagag
acagacagtctagaaaggagagattacagaacagctagtcagaggtggag
aggaaagtcatattgactaagtcagctgggagaggagtttgagccagaac
agctgagtggagccagcctgccagagctcagaaagaacaagaaagagtga
gcttattcagtaatacgtttcagaagctgaaaacattctaggcctagata
agattgtgtggaggttaaaagcttccaggactaggcctcggttagcagat
gggagggcaataaacctccactgagacatcaatttatttcaggagaataa
aaggctactttttacaggacaggctacatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12754474_12755502
seq2: B6Ng01-201C23.b_47_1073 (reverse)

seq1  CCCAAGTGCTGGGATTAAAGGCATGCGCCACCGCTGTCCAGCTATACCAA  50
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  CCCAAGTGCTGGGATT-AAGGCATGCGCCATCGCTGTCCAGCTATACCAA  49

seq1  GGTTTCTATATCAAGAAGGCGAGGCTTCACGAGAAACCACAATCTGGCTT  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -GTTTCTATATCAAGAAGGCGAGGCTTCACGAGAAACCACAATCTGGCTT  98

seq1  GTAGGTGAATCTCTCAGGAACACACCTATTCCATCTAGACATACAGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGAATCTCTCAGGAACACACCTATTCCATCTAGACATACAGTGGT  148

seq1  AGCAAGAGGCACATATTTGGCCCAGTTAATATCTATACGGGAGGTGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGGCACATATTTGGCCCAGTTAATATCTATACGGGAGGTGGGGG  198

seq1  AGTAAAGGGGTTGTCAAAGGTGGTGGGAGAGCTCCTCTCTCTAGAACAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGGGGTTGTCAAAGGTGGTGGGAGAGCTCCTCTCTCTAGAACAAG  248

seq1  ACTATGCAGTTCCTCATCTTTGAGTCATGAGCTTCCAACTCAGTTTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCAGTTCCTCATCTTTGAGTCATGAGCTTCCAACTCAGTTTGGGG  298

seq1  CAAGGGTGTCAAATTAAGAGAGCCTCAGCCACATCTCAGTGACAAAAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTGTCAAATTAAGAGAGCCTCAGCCACATCTCAGTGACAAAAACC  348

seq1  AACTGAGAACACGACAATGGTGTATCTGCAGTTCCTCCTCCTATGGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAACACGACAATGGTGTATCTGCAGTTCCTCCTCCTATGGTGGG  398

seq1  ACCTTTTACTTCAGAAATATGATTCCCTAACTGGGGAGGCCAGATGGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTACTTCAGAAATATGATTCCCTAACTGGGGAGGCCAGATGGTAA  448

seq1  TGAATAGCTTACCATATTGTGTAGGTCTTACTTGATTATTTCATGTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGCTTACCATATTGTGTAGGTCTTACTTGATTATTTCATGTATGC  498

seq1  CTTCAACAGTGAGAAATTGGGGACTGGAGAGATGACTTGGTGTGTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACAGTGAGAAATTGGGGACTGGAGAGATGACTTGGTGTGTAAGAG  548

seq1  TGTTTGCTCAGCAAGCTTGAGGACCTGAATTCAAACCCACAGCACCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCTCAGCAAGCTTGAGGACCTGAATTCAAACCCACAGCACCCACC  598

seq1  TAAAAAGCCAGGCAATGCTGCACATGCCTGCAGCCCCAGCATTGAGGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGCCAGGCAATGCTGCACATGCCTGCAGCCCCAGCATTGAGGAAT  648

seq1  GTGCCCTGGAGTCCACACACTTGGGGAGTGGAGGGAGGGGGATGCTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTGGAGTCCACACACTTGGGGAGTGGAGGGAGGGGGATGCTGAGT  698

seq1  TCAAGGTCATCCTCAAGTTACATAGTAAATTTCAGGCCAGGTATGAGACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTCATCCTCAAGTTACATAGTAAATTTCAGGCCAGGTATGAGACC  748

seq1  CCGTCTTCCTCTCTTCCCATGCCCCCCAAAAAGTAACAACTTTGTAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTTCCTCTCTTCCCATGCCCCCCAAAAAGTAACAACTTTGTAAGAA  798

seq1  ATTAATATACTGTTGGCATAGTATTTTTATTACCTGTCCTTGGGAATTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATACTGTTGGCATAGTATTTTTATTACCTGTCCTTGGGAATTCT  848

seq1  TTTTTTGTTTATTTTGTTTTTTGTTTTTTCGAGACAGGGTTTCTCTGTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTATTTTGTTTTTTGTTTTTTCGAGACAGGGTTTCTCTGTGT  898

seq1  ATCCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGGCTGGCCTGGAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGGCTGTTCTGGAACTCACTTTGTAGACCAGGCTGGCCTGGAACT  948

seq1  CAGAAATCCGACTGCCTTTGCCTCCGGAGTGCTGGGATTAAAGGCGTGTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCCGACTGCCTTTGCCTCCGGAGTGCTGGGATTAAAGGCGTGTG  998

seq1  CCACCACACCCGGCTGTCCTTGGGAATTC  1029
      |||||||||||||||||||||||||||||
seq2  CCACCACACCCGGCTGTCCTTGGGAATTC  1027

seq1: chr13_12621065_12622035
seq2: B6Ng01-201C23.g_67_1038

seq1  GAATTCTGTTTCTTGTCCTGGATTTGGGGTTGGGATCAAGTCCGGGTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCTTGTCCTGGATTTGGGGTTGGGATCAAGTCCGGGTCAG  50

seq1  GGTACTCTTTCCATGGCCCTGGTCTTGGGATCAAGGAAGGATCAAGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTCTTTCCATGGCCCTGGTCTTGGGATCAAGGAAGGATCAAGGTGC  100

seq1  TTTTCCTTTGCCCTTTTATGCCATACAAACAGGGTGGGTACAGAGGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTTTGCCCTTTTATGCCATACAAACAGGGTGGGTACAGAGGCCAG  150

seq1  AGGAGGACTCTGCCTTAGATATTTGAGACCTGGAGTCAGGCAGGTAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGACTCTGCCTTAGATATTTGAGACCTGGAGTCAGGCAGGTAACCA  200

seq1  GCAAGCTTCAGTGGTTCTTCTGTCTCCATCCAACATTGTCCTGGGGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTCAGTGGTTCTTCTGTCTCCATCCAACATTGTCCTGGGGCTAC  250

seq1  AAGTCAGTACACAGCCACATGTGGCCACATCTGTCTCTTTTAAAACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGTACACAGCCACATGTGGCCACATCTGTCTCTTTTAAAACTTTT  300

seq1  AAATTATTTTTATTTATAGGGATGCTGGGATCTCAGGTCTAGTGCTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTTTATTTATAGGGATGCTGGGATCTCAGGTCTAGTGCTTGTT  350

seq1  CAACAAATGCTCTTACCAACTGAGCCATATCCCTAGCCCCTTGGGAGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAATGCTCTTACCAACTGAGCCATATCCCTAGCCCCTTGGGAGTTT  400

seq1  AGTAAAGCACAGTATATCTTATCCAAATGGGGCTGTTATGGTTTGAATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAGCACAGTATATCTTATCCAAATGGGGCTGTTATGGTTTGAATGT  450

seq1  GAAGTCACTCACAGGTGTTACAGGATATTTGAAACTGCTTCTAGTTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCACTCACAGGTGTTACAGGATATTTGAAACTGCTTCTAGTTAGGG  500

seq1  TGGGGCTCAGCCTGTGGCATACACCTTTAAGCCCTCTTGCTGGAATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTCAGCCTGTGGCATACACCTTTAAGCCCTCTTGCTGGAATACAG  550

seq1  ACACACCCTTGGTACTCATCTTTAATCCCAAAAGGAAGCACACATGTTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCTTGGTACTCATCTTTAATCCCAAAAGGAAGCACACATGTTTG  600

seq1  AAAGTGATATCTAATTGAGTGGCAGAAAAAGTGATGAATCAGGGAAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGATATCTAATTGAGTGGCAGAAAAAGTGATGAATCAGGGAAAGAG  650

seq1  TTGCAGAATAGGATATGCCCAACCCTCCCAGGAAGAAAGGAAAGGGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAATAGGATATGCCCAACCCTCCCAGGAAGAAAGGAAAGGGAGAG  700

seq1  ACAGACAGTCTAGAAAGGAGAGATTACAGAACAGCTAGTCAGAGGTGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTCTAGAAAGGAGAGATTACAGAACAGCTAGTCAGAGGTGGAG  750

seq1  AGGAAAGTCATATTGACTAAGTCAGCTGGGAGAGGAGTTTGAGCCAGAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGTCATATTGACTAAGTCAGCTGGGAGAGGAGTTTGAGCCAGAAC  800

seq1  AGCTGAGTGGAGCCAGCCTGCCAGAGCTCAGAAAGAACAAGAAAGAGTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGTGGAGCCAGCCTGCCAGAGCTCAGAAAGAACAAGAAAGAGTGA  850

seq1  GCTTATTCAGTAATACGTTTCAGAGGCTGAAAACATTCTAGGCCTAGATA  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GCTTATTCAGTAATACGTTTCAGAAGCTGAAAACATTCTAGGCCTAGATA  900

seq1  AGATTGTGTGGAGGTTAAAAGCTTCCAGGACTAAGGCCTCGGTTAGCAGA  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGATTGTGTGGAGGTTAAAAGCTTCCAGGACT-AGGCCTCGGTTAGCAGA  949

seq1  TGG--AGGCAATAAACCTCCACT  971
      |||   |||||||||||||||||
seq2  TGGGAGGGCAATAAACCTCCACT  972