BAC Information

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BAC

Clone NameB6Ng01-202G08
Chromosome13 (Build37)
Map Location 76,717,846 - 76,718,709
singlet/doubletsinglet
Overlap geneMctp1
Upstream geneLOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553, LOC622313, Spata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276
Downstream geneLOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139, LOC675063
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202G08.bB6Ng01-202G08.g
ACCGA022897GA022898
length8681,125
definitionB6Ng01-202G08.b B6Ng01-202G08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatctgggctcattcttggtcaagtgacaccaagaagacgtgg
cttattgatttttgggtaataagacacccatatattattggtgacttggg
tttagtattaatgcattcaggctgtctatattgtggtgaaaaatctttaa
tacattacatctgtgaatcttggagtcttgtgtgaagaacgtgtgaggct
gtatgaggaacattaatacatcagtgaagcattttggagcaccaagcatg
aggggagaatagcttgaacccttatgagcatattgggaagatcccagaga
cacagacagatactcacccaagacagacacagggacagattcacaacatt
catgcaggcgtagatccagactcatataacagacagacagaggacagtgg
aagacatggagggatcaaatatgggttccctcttggtcaaatgataccat
gagaagtactttattgatttctgtcattaatgcaaaattgacacattatt
ggtgagatagatttattaccagtgcacacaaactgatcacaacaaacaac
tataatattgtgtgtataaatatatatgtatatatatatttatatgtata
aatatgtgtatttgtatgtataagaatatatacatatatctttaagaata
cacccacccccccccacacacacacacacatcatcatcatctttgggaaa
tgtcaagtttcacacatctttaatagtattaaattcagctcactgcaaag
agccagcaaatattttctttgtccatgtgtgacgtgattctcacttttta
ctgtgggcttttgtcacagagaagaggctgattagaaaagggtaaataaa
gatatatgtagtttgtaa
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtccatttggttgggagactattaataactgcttctatttctttag
gggatatgggactgtttagaaggtcaacttgatcctgattcaactctttc
ttattgttctgtttcattaagtgccgaggaaacttaactctttatctctc
tattatttactttattaaaatctgtacttgattagcactagaaaatttaa
ctcttgcttactttataaatctctgtgcttgattagcactataaacttaa
gtcttactttaattttctgtgcttattaagggctagaaaacttaactctt
actttaattctgtcttaactctaagttactctgatgccagaagctgcagg
tctctgggtagttaacacctgttgcttatgcaggggattaagtcctggat
aagctgttgaggcttctttttctcttgcctggaaccctcaatggccagga
gagcaggaggcttagagcaatgaaaacttgttgaatcaggaggagaaagt
cacaggagcaagaggaaaaaacttttgcacaggcaaatatgcataaacac
acaaccattcatgtacacacactcataaatcttcatacagtcctgttgtg
cctagttacttatatcatgcttatatacttacacacacacacatccatat
ttatatgtggaacaagcaaaagcctccgcgagcaggttttcattgagcaa
gcaccagcacagaaagaactcactcacttctggattacaaataagcttcc
acctttaatgcgtaaagccatagcgttcttaccttttcattgataattga
atttagaacttgtctcattacaataaaagcctgcctgctgactgctgcct
ctcctgtgctcctctccatcgcttttttctcctttccctggccctacttt
aaatccgccctctaatccactttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76717846_76718709
seq2: B6Ng01-202G08.b_50_917

seq1  GAATTCAAATCTGGGCTCATTCTTGGTCAAGTGACACCAAGAAGACGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCTGGGCTCATTCTTGGTCAAGTGACACCAAGAAGACGTGG  50

seq1  CTTATTGATTTTTGGGTAATAAGACACCCATATATTATTGGTGACTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTGATTTTTGGGTAATAAGACACCCATATATTATTGGTGACTTGGG  100

seq1  TTTAGTATTAATGCATTCAGGCTGTCTATATTGTGGTGAAAAATCTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATTAATGCATTCAGGCTGTCTATATTGTGGTGAAAAATCTTTAA  150

seq1  TACATTACATCTGTGAATCTTGGAGTCTTGTGTGAAGAACGTGTGAGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACATCTGTGAATCTTGGAGTCTTGTGTGAAGAACGTGTGAGGCT  200

seq1  GTATGAGGAACATTAATACATCAGTGAAGCATTTTGGAGCACCAAGCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGGAACATTAATACATCAGTGAAGCATTTTGGAGCACCAAGCATG  250

seq1  AGGGGAGAATAGCTTGAACCCTTATGAGCATATTGGGAAGATCCCAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGAATAGCTTGAACCCTTATGAGCATATTGGGAAGATCCCAGAGA  300

seq1  CACAGACAGATACTCACCCAAGACAGACACAGGGACAGATTCACAACATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGATACTCACCCAAGACAGACACAGGGACAGATTCACAACATT  350

seq1  CATGCAGGCGTAGATCCAGACTCATATAACAGACAGACAGAGGACAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAGGCGTAGATCCAGACTCATATAACAGACAGACAGAGGACAGTGG  400

seq1  AAGACATGGAGGGATCAAATATGGGTTCCCTCTTGGTCAAATGATACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGGAGGGATCAAATATGGGTTCCCTCTTGGTCAAATGATACCAT  450

seq1  GAGAAGTACTTTATTGATTTCTGTCATTAATGCAAAATTGACACATTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTACTTTATTGATTTCTGTCATTAATGCAAAATTGACACATTATT  500

seq1  GGTGAGATAGATTTATTACCAGTGCACACAAACTGATCACAACAAACAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGATAGATTTATTACCAGTGCACACAAACTGATCACAACAAACAAC  550

seq1  TATAATATTGTGTGTATAAATATATATGTATATATATATTTATATGTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTGTGTGTATAAATATATATGTATATATATATTTATATGTATA  600

seq1  AATATGTGTATTTGTATGTATAAGAATATATACATATATCTTTAAGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTGTATTTGTATGTATAAGAATATATACATATATCTTTAAGAATA  650

seq1  CACCCACCCCCCCCCACACACACACACACATCATCATCATCTTTGGGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCACCCCCCCCCACACACACACACACATCATCATCATCTTTGGGAAA  700

seq1  TGTCAAG-TTCACACATCTTTAATAGTATTAAA-TCAGCTCACTGCAAAG  748
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTCAAGTTTCACACATCTTTAATAGTATTAAATTCAGCTCACTGCAAAG  750

seq1  AGCCAGCAAATATTTTCTTTGTCCATGTGTGACGTGATTCTCACTTTTTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCAAATATTTTCTTTGTCCATGTGTGACGTGATTCTCACTTTTTA  800

seq1  CTGT-GGCTTTTGTCACAGAGAAGAGGCTGATTAGAAAA-GGTAAATAAA  846
      |||| |||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTGTGGGCTTTTGTCACAGAGAAGAGGCTGATTAGAAAAGGGTAAATAAA  850

seq1  GATATATGTAGTTTGTAA  864
      ||||||||||||||||||
seq2  GATATATGTAGTTTGTAA  868