BAC Information

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BAC

Clone NameB6Ng01-203A08
Chromosome13 (Build37)
Map Location 66,364,297 - 66,365,426
singlet/doubletsinglet
Overlap geneEG665974
Upstream geneZfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892
Downstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A08.bB6Ng01-203A08.g
ACCGA023351GA023352
length1,122852
definitionB6Ng01-203A08.b B6Ng01-203A08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagggccaggtgcttatctaagtcagcagaacatctggttaac
ttttaaccaggtagaaagggtgggagatagggaggcacctggccaatctg
gacattcttgtatgtcttctctatctttatggctagccagttcctgggat
gactttacagcctttgttctttgctgtaggcccaaaaagccttcctaact
agcaagctgcatgagtcatggaccttgatttttcattttctttcacctag
aagtagagataaggatttgtttaattccctaacaaaagctccttcctctt
tctacacaggtaacctagcaacgttttacatgacaaagccttgcctgcct
tcagctcagccagagactcaacccctgaggagcctttgtctgatttaaac
acacaaataccactcctggtgtcctgtcttttggaatgtcagccttgatt
cccatgggcaggcttcattctcactgtgatttatgcctagccctgacctg
ggagaactttcacagatgggatgctatgtttctctcatgagtttagaaca
cccagggcttgaaatcagacaatgccctggcttagatttaaaaagccttt
taaaaaatggagtctgactctcagttcctcctgttccagtgaaatgccct
gtcattcacacagacagctgtggtggactgtgtttctcagacccttggtc
ggtgaaaaacagttgatgttgcctgctgctgtaagaccccaactcaatag
gtttcttagacccctagaaatgaagcccagcatggagttctttgttcttt
caccttcagcctgaaagaaggccagcatggagttcttttgccttcagcct
gaaagaaaggtgagatgggtgacccacctaggcatctgacccattgtgta
agggaccaagaacatttacacaacttccccagtcgttgtgggtgtaatcc
ctcccctcactttcagtgagagatgagctgtaattcaccatccccatatt
tatcatgctatcctatccttccctccactttatgggtcattcttttaaaa
cctcaactgcaactgctgggggttgatctctctgccccttgtggggttac
gagcctcagtctcagcatgctg
gaattctaaaaagtctctattttcttcctttatttctgtcttaacatttc
tttcattcattgttgaggtgtgtaacctccatgagtttgtaagctttgtg
ttctctctttttttttttgatatccagttgttatccatggtggtctgata
agatacagttgttctttcagttttattgtatgtatagagaattgcaatgt
gtctgaatatgtggtcagtttataagtaagtttcatgaggtgctgagcag
aaggtatattctcgtatatttcagttgaacgttctctaaataccagctgg
attcatgttcatgttgtcagttaactggactaattctttgtttagttttg
gtctgaagaatttgtcaattggtgggagtggggtattaaaatatctgagt
atgaatgtatgacactcattatgtgattttagctttaaaactgtttcttt
tacaaaggttggtgaccatatgtttaaggcatagatgttaaaaatttaaa
tgtcatctttggtgttttttttttctccctttgaggaatctatagtgtct
ttctccaattcttttgattactttttgtttaaaatctgttttgctgtatt
tgtaaatggctgtaccagtttgcttctttggtccattttctgggaatatc
ttttttaccaccctttaccttgaagtaatgcctattcttgatgttgagct
atatttatttgaatacaatagaaggttagattacgtttagcacccaattc
tgttcacctgtgtcgttttattggcaaactgaggtcattaatattatatc
caaagagcagtgatggctaactcctagtatgtgttattgctcttgctgct
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_66364297_66365426
seq2: B6Ng01-203A08.b_46_1167

seq1  GAATTCTGAGGGCCAGGTGCTTATCCAAGTCAGCAGAACATCTGGTTAAC  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GAATTCTGAGGGCCAGGTGCTTATCTAAGTCAGCAGAACATCTGGTTAAC  50

seq1  TTTTAACCAAGGTAGACAGGGTGGGAGATAGGGAGGCGCCTGGCCAATCC  100
      |||||||| ||||||| |||||||||||||||||||| ||||||||||| 
seq2  TTTTAACC-AGGTAGAAAGGGTGGGAGATAGGGAGGCACCTGGCCAATCT  99

seq1  CCACATTCTTGTATATCTTCTCTATCTTTGTGGCTAGCCAGTTCCTAGGA  150
        |||||||||||| |||||||||||||| |||||||||||||||| |||
seq2  GGACATTCTTGTATGTCTTCTCTATCTTTATGGCTAGCCAGTTCCTGGGA  149

seq1  TGACTTTACAGCCTTTGTTCTTTGCTCTAGGCCCAAAAAGCCTTCCTAAC  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGACTTTACAGCCTTTGTTCTTTGCTGTAGGCCCAAAAAGCCTTCCTAAC  199

seq1  TAGCAAGCTGCTTGAGTCATGGATCTTGAATTTTAATTTTCTTTCATCTA  250
      ||||||||||| ||||||||||| ||||| |||| ||||||||||| |||
seq2  TAGCAAGCTGCATGAGTCATGGACCTTGATTTTTCATTTTCTTTCACCTA  249

seq1  GAAGTAGAGATAAGGATTTGTTTAATTCCCTACCAAAAGCTCCTTCCTCT  300
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAAGTAGAGATAAGGATTTGTTTAATTCCCTAACAAAAGCTCCTTCCTCT  299

seq1  TTCTACACAGGTAACCTAGCAACGTTTTACATGACAAAGCCTTGCCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACACAGGTAACCTAGCAACGTTTTACATGACAAAGCCTTGCCTGCC  349

seq1  TAGCTGCCCTCAGATCAGCCTGGAAATCAACCCCTCAGGAGCCTTTATCA  400
      |        |||| |||||| |  | ||||||||| |||||||||| || 
seq2  T--------TCAGCTCAGCCAGAGACTCAACCCCTGAGGAGCCTTTGTCT  391

seq1  GATTTAAACACACAAATACCACTCCTGGTGTCCTGACTTTTGGAATGTCA  450
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GATTTAAACACACAAATACCACTCCTGGTGTCCTGTCTTTTGGAATGTCA  441

seq1  GCCTTGATTCCCTTGGGCAGGCTTCATGCTCACTGTGATTTATGCCTAGC  500
      |||||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  GCCTTGATTCCCATGGGCAGGCTTCATTCTCACTGTGATTTATGCCTAGC  491

seq1  CCTGACCTGGGAGAACTTTCACAGATGGGATGCTGTGTTTCTCTCATGAG  550
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCTGACCTGGGAGAACTTTCACAGATGGGATGCTATGTTTCTCTCATGAG  541

seq1  TTTAGAACACCCAGGGCTTGAAATCAGACAATGCCCTGGCTTAGATTT-A  599
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTAGAACACCCAGGGCTTGAAATCAGACAATGCCCTGGCTTAGATTTAA  591

seq1  AAAGCCTTTTAAAAAATGGAGTCTGACTCTCAGTTCCTCCTGTTCCACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGCCTTTTAAAAAATGGAGTCTGACTCTCAGTTCCTCCTGTTCCAGTG  641

seq1  AAATGCCCTGTCATTCACACAGACAGCTGTGGTGGACTGCGCTTCTCAGA  699
      ||||||||||||||||||||||||||||||||||||||| | ||||||||
seq2  AAATGCCCTGTCATTCACACAGACAGCTGTGGTGGACTGTGTTTCTCAGA  691

seq1  CCCTTGGTGGGTGAAAAACAGTCAATGTTGCCTGCTCCTGTAAGACCCCA  749
      |||||||| |||||||||||||  |||||||||||| |||||||||||||
seq2  CCCTTGGTCGGTGAAAAACAGTTGATGTTGCCTGCTGCTGTAAGACCCCA  741

seq1  ACTCATTGTGTTTCTTAGACCCCTAGAAATGAAGCCCAGCATGGAGTTCT  799
      ||||| |  |||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAATAGGTTTCTTAGACCCCTAGAAATGAAGCCCAGCATGGAGTTCT  791

seq1  TAGTTTTTTCACCTTCAGCCTGAAAGAAGCCCAGCATGGAGTTCTTTGTT  849
      | ||| ||||||||||||||||||||||| ||||||||||       |||
seq2  TTGTTCTTTCACCTTCAGCCTGAAAGAAGGCCAGCATGGA-------GTT  834

seq1  CTTTTGCCTTCAGCCT----GAAAGGTGAGATGGGTGACCCACCTAGGCA  895
      ||||||||||||||||    ||||||||||||||||||||||||||||||
seq2  CTTTTGCCTTCAGCCTGAAAGAAAGGTGAGATGGGTGACCCACCTAGGCA  884

seq1  TCTGACCCATTGTGTAAGGGACCAAGAACATTTACACAACTTCCCCAGTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCCATTGTGTAAGGGACCAAGAACATTTACACAACTTCCCCAGTC  934

seq1  TTTGT--GATCCATCCTTCCCCTCACTTTCGGGGAGAGATGAGCTGTAAT  993
       ||||  |    |||| ||||||||||||| | |||||||||||||||||
seq2  GTTGTGGGTGTAATCCCTCCCCTCACTTTCAGTGAGAGATGAGCTGTAAT  984

seq1  TCACCATCCCCACTTTTATGATGCTTATCCTATCCTTCCCT-CACTTTAT  1042
      ||||||||||||  ||||| |||| |||||||||||||||| ||||||||
seq2  TCACCATCCCCATATTTATCATGC-TATCCTATCCTTCCCTCCACTTTAT  1033

seq1  GGTTCATTCTTTAAAAACCTCCACTGCAACTGCTGGAGGTCTATCTCCTC  1092
      || ||||||||| |||||||| |||||||||||||| |||  |||| |||
seq2  GGGTCATTCTTTTAAAACCTCAACTGCAACTGCTGGGGGTTGATCT-CTC  1082

seq1  TGCCCCTTGT-GGGTTACGAG-CTCAGTCTCAGCATGCTG  1130
      |||||||||| |||||||||| ||||||||||||||||||
seq2  TGCCCCTTGTGGGGTTACGAGCCTCAGTCTCAGCATGCTG  1122