BAC Information

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BAC

Clone NameB6Ng01-203G12
Chromosome13 (Build37)
Map Location 65,250,604 - 65,251,678
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp367, Habp4, Cdc14b, 1110018J18Rik, Ctsl, Ccrk, LOC665612, 1190003K10Rik, LOC218298, Ppia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1
Downstream geneOlfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404, LOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203G12.bB6Ng01-203G12.g
ACCGA023631GA023632
length1,0551,073
definitionB6Ng01-203G12.b B6Ng01-203G12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcattgtcttttattttgtccccattttcattttagatttcat
taatttggatattctctatcttttcataagtttttgtctatcttgtctaa
taaaaggctcaaaggccatctccatctttcattaattctttgtagtcttc
tctttctattttattgatttcagcccccaatttgataatttcctgatgtc
tactcccttttttcattgctccctcgcttctttctgttctagactttaaa
gtgtgctgttaaattgccagtatgagagctctccaattttttcatgcagg
cattttgttctatgaatgtttatcatagcaccactttcattttctttttt
tttaagatttatttatttattatatgtaagtacactgtagctgtcttcag
acaccccagaagagggcgtcagatcttgttacagatggttgttagccacc
atgtggttgctgggatttgaactccggaccttcgaaagagcagtcgggtg
ctcttacccactgagccacctcaccagccccactttcattttcttagtgt
tcaataagattatgcatgttgctcaattgtggtccttttcattgaattct
acagagtctctaatttcttcctttatttctgtcttaacaattctttcttt
cagtagtgaggtgtgcagcctccctgagtttgtaagctttgtgttctctt
tggttttttgatatccagttgtaatccatggtggtttgataagatacagt
tgttatttcagttttcttgtatgtctagagaactgcaatgtgtctgaatg
tgtggtcagtttataagtaagtttcatgaggtgctgagcagaaggtatat
tctcgtatatttcagttgaacgttctctaaatatcagctgggattcatgt
tcatgtccgtcagttagctggagtatttctctgtttagttttagttctga
agatttgtcattggtggggactaggatattaaatttctgagaataaatgt
atgacagtcattatgtgattttagcttaaactgctcttttacaaaggttg
gtgat
gaattcttgaatggaagagaatcacttaaagaaatgttcaacatacttag
ctatcagggtaatgaaaatcaaaacaaccctgagattccgccttatacca
atcagaatggctaagataaaaaacttaggtgacagcagatgctgatgagg
atatgaagaaagggcaacactcccccactgctggtggggttgcaagctga
taaaccactttggaaataatatgtatttcaataaaatgttagaaaatgtg
aaggcaaatatcaaactacataaaagttgtttgggtttttattctaattt
cactctaaatgacattagcttttttatgtttcaagttcttaattttcatt
tatataattttaaaattatggacttgcaggaattttcataaaagcaacta
ttttattgtatgttacacaagttaacatatgacatgttttcagaaattat
taagtggtatgggtataagttgtccctataataagtcagaatgtttattc
ctttcctgctatttcttatttaattataacaaaaacacaatctgaaatac
atcacaaaacataacagcaatatttccctgccttgatgttttagttagtc
acagaaagccagacacctgaccagtattgggaagtgattcatatatgtcc
acactgtcttagatcatagttctggggtagtatcaggtaaatttttcatt
taaatttttcatttttgaagcttataagcatagattactatttttaaaaa
taggtgttattgtttgaatttggttttgttttgctttcaaatctttactc
tagaacttccttgtgccacttttccagttgcctgagcgatcaaactcttc
ttgttaaaacagaaccttagggaataaatctctgatgaccaacaccatgg
gagctatatattctttatttctatctcctgaaaattgggctgtggaaatt
ttgtgtgtgcatatttactgcagagttgaggaggaactcaaggctcagct
agaaagggaggaaagatactacatattctaggtgaggtctattctattta
tagaaaatattacgttttctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65250604_65251678
seq2: B6Ng01-203G12.g_64_1136

seq1  GAATTCTTGAATGGAAGAGAATCACTTAAAGAAATGTTCAACATACTTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAATGGAAGAGAATCACTTAAAGAAATGTTCAACATACTTAG  50

seq1  CTATCAGGGTAATGAAAATCAAAACAACCCTGAGATTCCGCCTTATACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGGGTAATGAAAATCAAAACAACCCTGAGATTCCGCCTTATACCA  100

seq1  ATCAGAATGGCTAAGATAAAAAACTTAGGTGACAGCAGATGCTGATGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAATGGCTAAGATAAAAAACTTAGGTGACAGCAGATGCTGATGAGG  150

seq1  ATATGAAGAAAGGGCAACACTCCCCCACTGCTGGTGGGGTTGCAAGCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGAAAGGGCAACACTCCCCCACTGCTGGTGGGGTTGCAAGCTGA  200

seq1  TAAACCACTTTGGAAATAATATGTATTTCAATAAAATGTTAGAAAATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCACTTTGGAAATAATATGTATTTCAATAAAATGTTAGAAAATGTG  250

seq1  AAGGCAAATATCAAACTACATAAAAGTTGTTTGGGTTTTTATTCTAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAATATCAAACTACATAAAAGTTGTTTGGGTTTTTATTCTAATTT  300

seq1  CACTCTAAATGACATTAGCTTTTTTATGTTTCAAGTTCTTAATTTTCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAAATGACATTAGCTTTTTTATGTTTCAAGTTCTTAATTTTCATT  350

seq1  TATATAATTTTAAAATTATGGACTTGCAGGAATTTTCATAAAAGCAACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATTTTAAAATTATGGACTTGCAGGAATTTTCATAAAAGCAACTA  400

seq1  TTTTATTGTATGTTACACAAGTTAACATATGACATGTTTTCAGAAATTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTATGTTACACAAGTTAACATATGACATGTTTTCAGAAATTAT  450

seq1  TAAGTGGTATGGGTATAAGTTGTCCCTATAATAAGTCAGAATGTTTATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGTATGGGTATAAGTTGTCCCTATAATAAGTCAGAATGTTTATTC  500

seq1  CTTTCCTGCTATTTCTTATTTAATTATAACAAAAACACAATCTGAAATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTGCTATTTCTTATTTAATTATAACAAAAACACAATCTGAAATAC  550

seq1  ATCACAAAACATAACAGCAATATTTCCCTGCCTTGATGTTTTAGTTAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAAACATAACAGCAATATTTCCCTGCCTTGATGTTTTAGTTAGTC  600

seq1  ACAGAAAGCCAGACACCTGACCAGTATTGGGAAGTGATTCATATATGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGCCAGACACCTGACCAGTATTGGGAAGTGATTCATATATGTCC  650

seq1  ACACTGTCTTAGATCATAGTTCTGGGGTAGTATCAGGTAAATTTTTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGTCTTAGATCATAGTTCTGGGGTAGTATCAGGTAAATTTTTCATT  700

seq1  TAAATTTTTCATTTTTGAAGCTTATAAGCATAGATTACTATTTTTAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTCATTTTTGAAGCTTATAAGCATAGATTACTATTTTTAAAAA  750

seq1  TAGGTGTTATTGTTTGAATTTGGTTTTGTTTTGCTTTCAAATCTTTACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTTATTGTTTGAATTTGGTTTTGTTTTGCTTTCAAATCTTTACTC  800

seq1  TAGAACTTCCTTGTGCCACTTTTCCAGTTGCCTGAGCGATCAAACTCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTTCCTTGTGCCACTTTTCCAGTTGCCTGAGCGATCAAACTCTTC  850

seq1  TTGTTAAAACAGAACCTTAGGGAATAAATCTCTGATGACCAACACCATGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAAACAGAACCTTAGGGAATAAATCTCTGATGACCAACACCATGG  900

seq1  GAGCTATATATTCTTTATTCCTATCTCCTGAAAAATTGGGCTGTGGAAAT  950
      ||||||||||||||||||| |||||||||| |||||||||||||||||||
seq2  GAGCTATATATTCTTTATTTCTATCTCCTG-AAAATTGGGCTGTGGAAAT  949

seq1  TTTGTGTGTGCATAATTTACTGCAGAGTTGAAGAGGAACTCAAGGCTCAG  1000
      ||||||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  TTTGTGTGTGCAT-ATTTACTGCAGAGTTGAGGAGGAACTCAAGGCTCAG  998

seq1  CTAGAAAGGGAAGGAAAGATACTACATA-TCTAGGTGAGGTCTA-TCTAT  1048
      |||||||||| ||||||||||||||||| ||||||||||||||| |||| 
seq2  CTAGAAAGGG-AGGAAAGATACTACATATTCTAGGTGAGGTCTATTCTA-  1046

seq1  TTTATAGAAAATATAACGTTTTCTCAA  1075
      |||||||||||||| ||||||||||||
seq2  TTTATAGAAAATATTACGTTTTCTCAA  1073