BAC Information

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BAC

Clone NameB6Ng01-204K14
Chromosome13 (Build37)
Map Location 69,953,691 - 69,954,712
singlet/doubletsinglet
Overlap geneMed10
Upstream geneAdcy2, LOC666205, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik
Downstream geneEG620143, LOC100042291, 4930520P13Rik, EG633042, BC018507, EG620473, Adamts16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204K14.bB6Ng01-204K14.g
ACCGA024544GA024545
length1,1891,054
definitionB6Ng01-204K14.b B6Ng01-204K14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctctcgttgttataacttgaatgtaaaatgcatatcgtatgctc
atgtgctgaatatttggtccccagctagcagatcaatttggggagattct
aaacattttagaatcaagcctagctacaggagagagggcactggaagtgt
tattgaaagtgatatctggaacctcgtcccattttctccctactccttga
ctgtcatgagacaaaccgttctggtcctacatgcatacacccccccccat
gctgactacttgatacaagctagattcatttttgaaaaaggaagctgaac
aaagaaaatgccctcatgagattggcttgggacaagcctgtggtgcactt
ctttgattgatgattgagacggaagggttcaatgcactgtggactggtgg
gttagtcctgagtgctatatgaaaggaggatgagcaaggcatggagaaca
aatgagtaagctctgcctcactgagggcccagaaacaagaaagtgaatat
gatatgctgaaactgtgaggcaaaagaaatcgccttccccttttatattg
atgttttggggtattttgtatcactgagatagaaacttgattagcacagt
aaattagcaccaaaatgtgtgacctgaaaagaccaaaacgtgtgacgagc
tgacaattttgtgtttcagatttatttgctattggttttcaagaagaacg
tggaaaagcttggagaaccaagctagaaatggcttacagtatcgtataca
agctcagatacggtttctggggcactcagaagcctaaaaggccaagaaag
gatacgggcagaaaaggctcataagtctcagacaggaatttaagtctcta
tcaagacatagaaggcaaagtccattcatattatattccaacagctttgt
ctaccttttatctgtggcctaagactgtggaaggttggaaatgaaagaac
agttaatcaagtataaaaaaaaaatctactttgaaaacaacccattccag
cttgcaggcttcaacacaagtgtttgctgtctgcttttcagtcagagcca
gaactgaaatttggcaatttgccttctagaaatagtagcaataaattggc
tgagaactgcaatggcaatctgaagaattggctataaaacaacctcttac
ccatcaaggaaagcccggggtacgacactaagtgatctg
gaattcctggatgtccagcagaaataccctttggattgtgactggcccct
ggggcttcggtcctacctgtatctcagactcattgccttgggccgtgctg
gagtgcattacccattgatggtgctcatgtggttaattttccctgagcac
ttgccgctcttgctgccatttctcacctgagacccgtgacagtctcaagg
cacacttctgaggcctgcatgcccccattgggcaccagttaaagtttttc
agttgttgcagtgggattgcatgtgtctttgtgacactggctctgtgacc
ctgagagtagagactttttttgactggataaaaccactgtgagggatagg
tggctggaaaagtggataatgcctctccagggctagagaaaacttgggag
atgtttgcacttgtgacctgtgtaattccggtgagtaattgcttcagtga
gcgctaagattctggggtgtgtgctgcctgcagacggcctctccactgca
gtgggagcacctggttggaggtgctcagtcgggtgtttccttcttaagcc
aaaaggaaggaattgttttaaagatacagtcccctttcagagaggtgacg
tcccttttaacaagttaattggagacattgagtagtttgactctgggtgt
ttaactttgtggaagataagtgaccttggtttccatcccctttgggtggc
tgtctcggttggattctgggttcctttggatgggggtgtgttgtgtataa
acttggattttttttttgacacagctatttttgttttttagaaatttaaa
agccttactgaattcaggaacttttctaaagttgtttccagaaagacatg
ggccaagtttcggagccttccggggggaatatcacccaccgtcctaagtt
gaaatccccatccctttgtaattacccagactgagccctgtgaaaacttg
tgcctgccactgctgccctccaaccttcatttaactggtcttggccccta
ccttcctgtttctattcattttgattcttgtggttatctcggggttgggg
gaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_69953691_69954712
seq2: B6Ng01-204K14.g_72_1125

seq1  GAATTCCTGGATGTCCAGCAGAAATACCCTTTGGATTGTGACTGGCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGATGTCCAGCAGAAATACCCTTTGGATTGTGACTGGCCCCT  50

seq1  GGGGCTTCGGTCCTACCTGTATCTCAGACTCATTGCCTTGGGCCGTGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTCGGTCCTACCTGTATCTCAGACTCATTGCCTTGGGCCGTGCTG  100

seq1  GAGTGCATTACCCATTGATGGTGCTCATGTGGTTAATTTTCCCTGAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCATTACCCATTGATGGTGCTCATGTGGTTAATTTTCCCTGAGCAC  150

seq1  TTGCCGCTCTTGCTGCCATTTCTCACCTGAGACCCGTGACAGTCTCAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGCTCTTGCTGCCATTTCTCACCTGAGACCCGTGACAGTCTCAAGG  200

seq1  CACACTTCTGAGGCCTGCATGCCCCCATTGGGCACCAGTTAAAGTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTCTGAGGCCTGCATGCCCCCATTGGGCACCAGTTAAAGTTTTTC  250

seq1  AGTTGTTGCAGTGGGATTGCATGTGTCTTTGTGACACTGGCTCTGTGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTGCAGTGGGATTGCATGTGTCTTTGTGACACTGGCTCTGTGACC  300

seq1  CTGAGAGTAGAGACTTTTTTTGACTGGATAAAACCACTGTGAGGGATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTAGAGACTTTTTTTGACTGGATAAAACCACTGTGAGGGATAGG  350

seq1  TGGCTGGAAAAGTGGATAATGCCTCTCCAGGGCTAGAGAAAACTTGGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGAAAAGTGGATAATGCCTCTCCAGGGCTAGAGAAAACTTGGGAG  400

seq1  ATGTTTGCACTTGTGACCTGTGTAATTCCGGTGAGTAATTGCTTCAGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCACTTGTGACCTGTGTAATTCCGGTGAGTAATTGCTTCAGTGA  450

seq1  GCGCTAAGATTCTGGGGTGTGTGCTGCCTGCAGACGGCCTCTCCACTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTAAGATTCTGGGGTGTGTGCTGCCTGCAGACGGCCTCTCCACTGCA  500

seq1  GTGGGAGCACCTGGTTGGAGGTGCTCAGTCGGGTGTTTCCTTCTTAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGCACCTGGTTGGAGGTGCTCAGTCGGGTGTTTCCTTCTTAAGCC  550

seq1  AAAAGGAAGGAATTGTTTTAAAGATACAGTCCCCTTTCAGAGAGGTGACG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGGAATTGTTTTAAAGATACAGTCCCCTTTCAGAGAGGTGACG  600

seq1  TCCC-TTTAACAAGTTAATTGGAGACATTGAGTAG-TTGACTCTGGGTG-  647
      |||| |||||||||||||||||||||||||||||| ||||||||||||| 
seq2  TCCCTTTTAACAAGTTAATTGGAGACATTGAGTAGTTTGACTCTGGGTGT  650

seq1  TTAAC-TTGTGGAAGATAAGTGACCT--GGTTCCAT-CCCTTTGGGTGGC  693
      ||||| ||||||||||||||||||||  | |||||| |||||||||||||
seq2  TTAACTTTGTGGAAGATAAGTGACCTTGGTTTCCATCCCCTTTGGGTGGC  700

seq1  TGTCTCGGTTGGATTCTGGGTTCC-TTGGAT-GGGGTGTGTTGTGTAT-A  740
      |||||||||||||||||||||||| |||||| |||||||||||||||| |
seq2  TGTCTCGGTTGGATTCTGGGTTCCTTTGGATGGGGGTGTGTTGTGTATAA  750

seq1  ACTTGGA--TTTTTTTTGACACAGCTATTTTTG-TTTTTAGAAATTTAAA  787
      |||||||  |||||||||||||||||||||||| ||||||||||||||||
seq2  ACTTGGATTTTTTTTTTGACACAGCTATTTTTGTTTTTTAGAAATTTAAA  800

seq1  AGCC-TACTG-ATTCAGGAAC-TTTCTAAAG-TGTTTCCAG-AAGACAT-  831
      |||| ||||| |||||||||| ||||||||| ||||||||| ||||||| 
seq2  AGCCTTACTGAATTCAGGAACTTTTCTAAAGTTGTTTCCAGAAAGACATG  850

seq1  GGCCAAGTATCGGAGCATT-CGGGGGGAAGATCACCCACCGTCCTAAG-T  879
      |||||||| ||||||| || ||||||||| |||||||||||||||||| |
seq2  GGCCAAGTTTCGGAGCCTTCCGGGGGGAATATCACCCACCGTCCTAAGTT  900

seq1  GAAGATCCCATACCCTTGTAA-TAACCAGACTGAG-CCAGTGAGAAGCTG  927
      |||   ||||| || |||||| || |||||||||| || |||| ||  ||
seq2  GAAATCCCCATCCCTTTGTAATTACCCAGACTGAGCCCTGTGAAAACTTG  950

seq1  TGCCTGCCACTGCTGCCTTCCAGCC-ACA-TGAACTGG-CCTGGCCCCTA  974
      ||||||||||||||||| |||| ||  || | |||||| | |||||||||
seq2  TGCCTGCCACTGCTGCCCTCCAACCTTCATTTAACTGGTCTTGGCCCCTA  1000

seq1  CC-TCCTGTTTCCA-TCATTTTGA-TCTTGTGGGACTC---GGGCTGGGG  1018
      || ||||||||| | ||||||||| ||||||||   ||   ||| |||||
seq2  CCTTCCTGTTTCTATTCATTTTGATTCTTGTGGTTATCTCGGGGTTGGGG  1050

seq1  GAGC  1022
      || |
seq2  GAAC  1054