BAC Information

Click to search

BAC

Clone NameB6Ng01-204O03
Chromosome13 (Build37)
Map Location 35,526,006 - 35,526,923
singlet/doubletsinglet
Overlap genenone
Upstream gene1300014I06Rik, D0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik, Peci
Downstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-204O03.bB6Ng01-204O03.g
ACCGA024706GA024707
length1,266929
definitionB6Ng01-204O03.b B6Ng01-204O03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaagcatcatgatactagagatcaccctgataaccaagatggca
gctacatgaagaccacgagggtagcatatacatagtggatacactaggca
gagaggtgatttacatttcatgtggacagagtgggacagcatgggttttt
atcgtactactcagtatggttcataatttaaaacttctgaattgattatt
tatggaacttcccattattatttttagatgacttcacgtaaaagactgta
gaaatcaaaaccttggataaaggataaggtagacagctattttgcatatt
ccttctctggaaagtagagaatgcatatggttgtgggtaatgaaggctaa
agtttttttttttttttacataccccattggaaaagactggattcagatc
tttccatgggatcttcacaattgttgcataggttaaaggctacatctcag
attattttctatcagggttcatcaaattccacagttggtgactaacttgg
ttacttttaagttgctatgaagagacaccatgactaagacaacttataaa
agaaaacatttagtttaggggctcatggttccagagggtagagtctatga
tcatgaccatcgtggtatggagcatggcagcagacaggcaggcatggtgc
tggagcagtaactgaaagcttgcatgagatccacagcccaaggcagagag
agagagagacagagagagagagagagacagagagagagagacagagagag
aaagagacacacacacacacacacacacacacacacagagagagagagag
agagagagagagagagagaactaactgggaatcacatgggcttttgaaac
cttaagactcattcccagtgacatacctccttcaacacctccaactcctt
ctcaaacagttccaccaactagggaccaggtatgcaatgtacaaacttat
caggaccattcccattcaaactaacacagaagaacaaaattagctgagtt
taaattttgccctttggaggtatgggaaaacccttgcttgggatgtcctc
tctggggggaaatttatggcgcgcgctgccatttgctactttgcctagga
aatccataggagaaaaataacgactgcattctctctctacgcaacccaag
gtaattatattttgtgtgagagatggagttccccctgctttcgagaaatc
gagtgtaatatatatttgacttcccacacgaaacgttctatactccatac
tcttgggtgtcgacgt
gaattcactccagctttacctaccctgcaagcaccctatgtcctctgact
cacagacgccctgtggtcactgtctatgctcacctttattctgtctaatg
acacagctggcccagcttcaatttcctgactcatcacctaagccactctt
aggtcaatatcctgacccctctgccttttccaacttccagaataacaacc
caaagctccaaggtagaatctggccttccccaggtctctgaccagtatgt
aggaaataatcaattttatttgggtaaatttaaaagatcttagcagatct
taaatgagacagaattttcttaatttagaaatttgaatttgcagcaaatg
ctgataaatgtaaaattccagaagaattttgccacattattaaaatcaaa
cagcaaggaaagcaagtgttcttggtaaattgccaataacaaaactgatt
gtgtcattttcctacaataaatagcttcaatattattgtactcagctttc
tgttgctgtgataaaacacctgagaaaatcaacttaaaaagaggagaggg
ttattctagctcacagttcagagattttggttgactgtctgctcagcact
gctcttagtagtagggatcatgtgtaagaacaaacctgctcacctcatgg
cagtgggaagcaaagaaagtacagagagagggagagggagggaaagaggg
agggagactgacccaacctaatatacactctgaattaagcaagatggatt
taagattttgtgctacacaatccccatttataactttcctggaaagaaaa
gcatcagagatagaaaatagatttccagagcacagggtgagaaggagagc
ctcatcatcaagtagaaatagggagattgaatagaatttttatattctta
atgggagggttgtgggttacatgggcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_35526006_35526923
seq2: B6Ng01-204O03.g_69_997

seq1  GAATTCACTCCAGCTTTACCTACCCTGCAAGCACCCTATGTCCTCTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCAGCTTTACCTACCCTGCAAGCACCCTATGTCCTCTGACT  50

seq1  CACAGACGCCCTGTGGTCACTGTCTATGCTCACCTTTATTCTGTCTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACGCCCTGTGGTCACTGTCTATGCTCACCTTTATTCTGTCTAATG  100

seq1  ACACAGCTGGCCCAGCTTCAATTTCCTGACTCATCACCTAAGCCACTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTGGCCCAGCTTCAATTTCCTGACTCATCACCTAAGCCACTCTT  150

seq1  AGGTCAATATCCTGACCCCTCTGCCTTTTCCAACTTCCAGAATAACAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATATCCTGACCCCTCTGCCTTTTCCAACTTCCAGAATAACAACC  200

seq1  CAAAGCTCCAAGGTAGAATCTGGCCTTCCCCAGGTCTCTGACCAGTATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTCCAAGGTAGAATCTGGCCTTCCCCAGGTCTCTGACCAGTATGT  250

seq1  AGGAAATAATCAATTTTATTTGGGTAAATTTAAAAGATCTTAGCAGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAATCAATTTTATTTGGGTAAATTTAAAAGATCTTAGCAGATCT  300

seq1  TAAATGAGACAGAATTTTCTTAATTTAGAAATTTGAATTTGCAGCAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGACAGAATTTTCTTAATTTAGAAATTTGAATTTGCAGCAAATG  350

seq1  CTGATAAATGTAAAATTCCAGAAGAATTTTGCCACATTATTAAAATCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAAATGTAAAATTCCAGAAGAATTTTGCCACATTATTAAAATCAAA  400

seq1  CAGCAAGGAAAGCAAGTGTTCTTGGTAAATTGCCAATAACAAAACTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAGGAAAGCAAGTGTTCTTGGTAAATTGCCAATAACAAAACTGATT  450

seq1  GTGTCATTTTCCTACAATAAATAGCTTCAATATTATTGTACTCAGCTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCATTTTCCTACAATAAATAGCTTCAATATTATTGTACTCAGCTTTC  500

seq1  TGTTGCTGTGATAAAACACCTGAGAAAATCAACTTAAAAAGAGGAGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGTGATAAAACACCTGAGAAAATCAACTTAAAAAGAGGAGAGGG  550

seq1  TTATTCTAGCTCACAGTTCAGAGATTTTGGTTGACTGTCTGCTCAGCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTAGCTCACAGTTCAGAGATTTTGGTTGACTGTCTGCTCAGCACT  600

seq1  GCTCTTAGTAGTAGGGATCATGTGTAAGAACAAACCTGCTCACCTCATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTAGTAGTAGGGATCATGTGTAAGAACAAACCTGCTCACCTCATGG  650

seq1  CAGTGGGAAGCAAAGAAAGTACAGAGAGAGGGAGAGGGAGGGAAAGAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGAAGCAAAGAAAGTACAGAGAGAGGGAGAGGGAGGGAAAGAGGG  700

seq1  AGGGAGACTGACCCAACCTAATATACACTCTGAATTAAGCAAGATGGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGACTGACCCAACCTAATATACACTCTGAATTAAGCAAGATGGATT  750

seq1  TAAGATTTTGTGCTACACAAT-CCCATTTATAAC-TTCCTGGAAAGAAAA  798
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  TAAGATTTTGTGCTACACAATCCCCATTTATAACTTTCCTGGAAAGAAAA  800

seq1  GCATCAGAGATAGAAAATAGATTTCCAGAGCACA-GGTGAGAA-GAGAGC  846
      |||||||||||||||||||||||||||||||||| |||||||| ||||||
seq2  GCATCAGAGATAGAAAATAGATTTCCAGAGCACAGGGTGAGAAGGAGAGC  850

seq1  CTCATCATCAAGTAG-AATAGGGAGATTG-ATAGAATTTTTATA-TCTTA  893
      ||||||||||||||| ||||||||||||| |||||||||||||| |||||
seq2  CTCATCATCAAGTAGAAATAGGGAGATTGAATAGAATTTTTATATTCTTA  900

seq1  ATGG--TGGGTGT-GGTTACAT-GGCATG  918
      ||||   || ||| |||||||| ||||||
seq2  ATGGGAGGGTTGTGGGTTACATGGGCATG  929