BAC Information

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BAC

Clone NameB6Ng01-205G22
Chromosome13 (Build37)
Map Location 99,478,316 - 99,631,428
singlet/doubletdoublet
Overlap geneLOC669675, Fcho2, Tnpo1
Upstream geneLOC100039740, Rgnef, LOC667703, Utp15, Ankra2, EG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171
Downstream geneEG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797, Zfp366, Ptcd2, Mrps27, Mtap1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205G22.bB6Ng01-205G22.g
ACCGA025114GA025115
length8091,079
definitionB6Ng01-205G22.b B6Ng01-205G22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,478,316 - 99,478,922)(99,630,345 - 99,631,428)
sequence
gaattccaactagacaacttacaccactgccttggtcagggtttctattt
ctgtaataaaacaccacgaccaaaaagcaagttggagaggaaagggttta
tctgacttacacttccacattgctgttcatcgttgaaggatgtcaggaca
ggaactcaaacagggcagaaacccagaggcaggaggtagaggccatggag
ggatggatgctgcttactgccttgctccccatggcttgctcagcctgctt
tctgatagcacccaggaccactagcccagggatggcaccacccacaatgg
attgggccctcccacatcaatcactaatagagaaaatgccctacagctgg
atcttatggaagcattctctcttcttcctgtcaagttgacacaagaccag
ttaccagtaccactaccatcctatggcatgatgggttgcatccagttgaa
tcattggccacaggtggctgattgagcccccccaccccaccctggccaaa
taattcaagctattgccaacgctattgatcaccctctacagattggtggt
tatgctctattgctggcggcaacgcttgtctcattgaacacagagaactg
gaacccatgctgtgatggctatccttggttgtcaccctgactacatctcc
aatgaaagaaaaacccaagaatgaaagaggacacttgtgagtcacctttt
gtctcatattactttgtttgggttttttgttttttgttttgtcttattgg
tcttttgaatgtatattatgctttctgattttgtggttgtggggtggggt
ttttttgtt
gaattccaggacagccagggctatacagagaaaccctgttttgaaaaacc
aaaaaaaaaaaaaaaaaaaaaaaaaaattgtgatcaactctttgctatat
ctagttcacattggaaaaagtttatactttatatccttgttaatgaaatc
ttagctatcttatatatagtcctttataaagaatttttctggcatatttt
atttctattttatatggtaattacttttactttatacttggttactttcc
aaataagaaatgatatacttgattcccaagttatctgctattggaactgt
taaataaaactaagttggtgttttgtttgtttatttgttttgtttttgag
acagggtgtcatgtagccctgactgacctggaactcagtgtcaagtaggc
tggcttctgagagattttccccacgttctggggttgaaaacatatgttac
tacagtcctggccccgggtagaactcagtcttaagtatgacctcttatct
gtttgcttaaagtgagcacattttgccacagaattttaacaataaccatg
gtcttctagaagcattgggtttaatagaacattgtattttttccacgaag
atagaagaattctgtaatcacgtgcggaaagaagtatgttaataaattgg
ctaatgctgtcgcaatgttcatgtttctcaggaaagtgttctgctgctgc
tctcgatgttctcgcaaatgtttatcgtgatgagcttttgccgcacattc
tgccacttttgaaagaattgcttttccatcatgaatgggttgtgaaagaa
tctggcatcttggtttttaggagcaattgctgaaagtacgtccagcttga
attacaagggttttgatagatattagtaaggcctaggctgctgtgaggat
tgtgacccgagaggctgagacttgccctaattcacgcttcctggctctgc
ttgcagtgccagatgtgtacacgatcacacagttgaaagaggtgactgat
tcagaagccacttaagccagcttctcctggtttagtcacaggccctcctc
cgggtcccagccagcgggttccaccatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_99478316_99478922
seq2: B6Ng01-205G22.b_251_856

seq1  TGGATGCTGCTTACTGCCTTGCTCCCCATGGCTTGCTCAGCCTGCTTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTGCTTACTGCCTTGCTCCCCATGGCTTGCTCAGCCTGCTTTCT  50

seq1  GATAGCACCCAGGACCACTAGCCCAGGGATGGCACCACCCACAATGGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCACCCAGGACCACTAGCCCAGGGATGGCACCACCCACAATGGATT  100

seq1  GGGCCCTCCCACATCAATCACTAATAGAGAAAATGCCCTACAGCTGGATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCCCACATCAATCACTAATAGAGAAAATGCCCTACAGCTGGATC  150

seq1  TTATGGAAGCATTCTCTCTTCTTCCTGTCAAGTTGACACAAGACCAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGAAGCATTCTCTCTTCTTCCTGTCAAGTTGACACAAGACCAGTTA  200

seq1  CCAGTACCACTACCATCCTATGGCATGATGGGTTGCATCCAGTTGAATCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCACTACCATCCTATGGCATGATGGGTTGCATCCAGTTGAATCA  250

seq1  TTGGCCACAGGTGGCTGATTGAGCCCCCCCACCCCACCCTGGCCAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCCACAGGTGGCTGATTGAGCCCCCCCACCCCACCCTGGCCAAATAA  300

seq1  TTCAAGCTATTGCCAACGCTATTGATCACCCTCTACAGATTGGTGGTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTATTGCCAACGCTATTGATCACCCTCTACAGATTGGTGGTTAT  350

seq1  GCTCTATTGCTGGCGGCAACGCTTGTCTCATTGAACACAGAGAACTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTATTGCTGGCGGCAACGCTTGTCTCATTGAACACAGAGAACTGGAA  400

seq1  CCCATGCTGTGATGGCTATCCTTGGTTGTCACCCTGACTACATCTCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGCTGTGATGGCTATCCTTGGTTGTCACCCTGACTACATCTCCAAT  450

seq1  GAAAGAAAAACCCAAGAATGAAAGAGGACACTTGTGAGTCACCTTTTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAAACCCAAGAATGAAAGAGGACACTTGTGAGTCACCTTTTGTC  500

seq1  TCATATTACTTTGTTTGGGTTTTTTGTTTTTTGTTTTGTCTTATTGGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTACTTTGTTTGGGTTTTTTGTTTTTTGTTTTGTCTTATTGGTCT  550

seq1  TTTGAATGTATATTATGCTTTCTGATTTTGTGGTTGT-GGGTGGGTTTTT  599
      ||||||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  TTTGAATGTATATTATGCTTTCTGATTTTGTGGTTGTGGGGTGGGGTTTT  600

seq1  TGTTTGTT  607
        ||||||
seq2  --TTTGTT  606

seq1: chr13_99630345_99631428
seq2: B6Ng01-205G22.g_72_1150 (reverse)

seq1  ATATGGTTGAACCCGCTGGCTGGGACCAGAAG--AGGCCTGTGACTTATA  48
      ||||||| ||||||||||||||||||| | ||   |||||||||||   |
seq2  ATATGGTGGAACCCGCTGGCTGGGACCCGGAGGAGGGCCTGTGACT--AA  48

seq1  CCCAGGAGAAGCTGACCTTAAGGTGGCTTCTGAGTCAGTCACCTCTTTCA  98
       |||||||||||||  ||||| ||||||||||| ||||||||||||||||
seq2  ACCAGGAGAAGCTG-GCTTAA-GTGGCTTCTGAATCAGTCACCTCTTTCA  96

seq1  ACTGTGTGATCTGTGTACCACATCTGGCACTGCAAGCAGAGCCAGGAAGC  148
      ||||||||||| ||||| ||||||||||||||||||||||||||||||||
seq2  ACTGTGTGATC-GTGTA-CACATCTGGCACTGCAAGCAGAGCCAGGAAGC  144

seq1  GTGAATTTAGGGCAAGTCTCAGCCTACTCGGGTCACAATTCCTCACAGCA  198
      ||||| ||||||||||||||||||| |||||||||||| |||||||||||
seq2  GTGAA-TTAGGGCAAGTCTCAGCCT-CTCGGGTCACAA-TCCTCACAGCA  191

seq1  GCCTAGGCCTTACTAATATCTATCAAAAACCTTGTAATTCAAGCTGGACG  248
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GCCTAGGCCTTACTAATATCTATCAAAACCCTTGTAATTCAAGCTGGACG  241

seq1  TACCTTCAGCAATTGCTCCT-AAAACCAAGATGCCAGATTCTTTCACAAC  297
      ||| |||||||||||||||| |||||||||||||||||||||||||||||
seq2  TACTTTCAGCAATTGCTCCTAAAAACCAAGATGCCAGATTCTTTCACAAC  291

seq1  CCATTCATGATGGAAAAGCAATTCTTTCAAAAGTGGCAGAATGTGCGGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCATGATGGAAAAGCAATTCTTTCAAAAGTGGCAGAATGTGCGGCA  341

seq1  AAAGCTCATCACGATAAACATTTGCGAGAACATCGAGAGCAGCAGCAGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCATCACGATAAACATTTGCGAGAACATCGAGAGCAGCAGCAGAA  391

seq1  CACTTTCCTGAG-AACATGAACATTGCGACAGCATTAGCCAATTTATTAA  446
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CACTTTCCTGAGAAACATGAACATTGCGACAGCATTAGCCAATTTATTAA  441

seq1  CATACTTCTTTCCGCACGTGATTACAGAATTCTTCTATCTTCGTGGAAAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTCTTTCCGCACGTGATTACAGAATTCTTCTATCTTCGTGGAAAA  491

seq1  AATACAATGTTCTATTAAACCCAATGCTTCTAGAAGACCATGGTTATTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAATGTTCTATTAAACCCAATGCTTCTAGAAGACCATGGTTATTGT  541

seq1  TAAAATTCTGTGGCAAAATGTGCTCACTTTAAGCAAACAGATAAGAGGTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTGTGGCAAAATGTGCTCACTTTAAGCAAACAGATAAGAGGTC  591

seq1  ATACTTAAGACTGAGTTCTACCCGGGGCCAGGACTGTAGTAACATATGTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTAAGACTGAGTTCTACCCGGGGCCAGGACTGTAGTAACATATGTT  641

seq1  TTCAACCCCAGAACGTGGGGAAAATCTCTCAGAAGCCAGCCTACTTGACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACCCCAGAACGTGGGGAAAATCTCTCAGAAGCCAGCCTACTTGACA  691

seq1  CTGAGTTCCAGGTCAGTCAGGGCTACATGACACCCTGTCTCAAAAACAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTCCAGGTCAGTCAGGGCTACATGACACCCTGTCTCAAAAACAAA  741

seq1  ACAAATAAACAAACAAAACACCAACTTAGTTTTATTTAACAGTTCCAATA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATAAACAAACAAAACACCAACTTAGTTTTATTTAACAGTTCCAATA  791

seq1  GCAGATAACTTGGGAATCAAGTATATCATTTCTTATTTGGAAAGTAACCA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATAACTTGGGAATCAAGTATATCATTTCTTATTTGGAAAGTAACCA  841

seq1  AGTATAAAGTAAAAGTAATTACCATATAAAATAGAAATAAAATATGCCAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGTAAAAGTAATTACCATATAAAATAGAAATAAAATATGCCAG  891

seq1  AAAAATTCTTTATAAAGGACTATATATAAGATAGCTAAGATTTCATTAAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCTTTATAAAGGACTATATATAAGATAGCTAAGATTTCATTAAC  941

seq1  AAGGATATAAAGTATAAACTTTTTCCAATGTGAACTAGATATAGCAAAGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATATAAAGTATAAACTTTTTCCAATGTGAACTAGATATAGCAAAGA  991

seq1  GTTGATCACAATTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTCAAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATCACAATTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTCAAAA  1041

seq1  CAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAATTC  1084
      ||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAATTC  1079