BAC Information

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BAC

Clone NameB6Ng01-206J02
Chromosome13 (Build37)
Map Location 87,233,770 - 87,234,797
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042887, LOC100042893
Downstream geneLOC675707
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206J02.bB6Ng01-206J02.g
ACCGA025949GA025950
length1,2581,045
definitionB6Ng01-206J02.b B6Ng01-206J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cttattaattagttggactgccagtcgaactacgtcaattgatattggtt
gaaaatgctctcatttttccactggatgtttttagattctttatcaaagt
tcaagtggccataggtgtgtgagttcatttctggatcttcagttctattc
cattgatctacttgtgtatctccataccaataccatgcaagttttatcac
tattgatctatagtatagcttgaggttagggatggtgattctcccaaaat
ttcttttattgttgagaatagttttcactatcctcggttatttattattc
caaatgaatctgagaattgctcattttaactctatgaagaattaaattgg
aattttgatggggattgcattgaatctatagattgcttttggtaagatgg
ccatttttactatattaatcttggcaatctatgcacatggaagatctttt
catcttctgagctcttcttcaacttctttctcctggaatttgaagttctt
gttatacagatctttcactcatttggttagagtcacacccagatatttta
tattaattgtgactattgtgaagggtgttgtttccctaatttctttttaa
atccttttatcctttgagtagaggaaggttactgatttgcttgagataat
tttatatccagtcactttgctgaaattatttatcgggtttaggagttttg
ttatcctgtgccttgattttcattgaattctaataagtctttatcttctt
tctttattttttgcctgaccaagttatcgtttagtagatagttatttagc
ttccatgtgtacttgggatttcttttttttttttctgcacttttaatttt
aattaggtattttcctcatttacatttccaatgctatcccaaaagtcccc
cataccctccccccaactcctctacccacccactgccacttcttggccct
ggcattcccctgtactgaggcataataaaggttgcctgtccaatggggcc
tcctctttccactgatggcctactagggccatcttctgaatacatggtgc
agctaggagaccacgagctccgggggtactggtagttcaatatggttgtc
cacctatagggtgccgatccctttagctccttggttactttcctagctcc
tccatggggggcctgggtaatcatcatagttgactggtggagcagcacct
tggttggctaggacccgacgtagtctcccatgagaacgcgctaatatcag
ggttccat
gaattcaaacagaaatcatagaggtttgtttacatatgcttataggttca
ttcaacagggcatgcttaggtagatttttagagtgcaatccaaacacaac
tgcttacagatactaccatttgtggttgactgggattttctagatgaatt
aacaatcatgatgcagtcccacatatagttgttcatgccaatctgatctc
agaatttttttctattattttacctttctagtactctaaattatgttgag
ttggaatgttaaacgaaatagcatgcattatagcataaacttcttttgtc
tatttgcttaaaagacttgaatataaaacatggcaaacaaaactctaaca
tacattattttttttaaaaaactttctggaaatataattccagtttgata
ctttgaaaaggcatgggaacttcaacatattctttgttttagttgaaaga
atttgaaaaataaaaattttactttgcatataccaaattatcttttactc
atttggtccctttatgaacatattttcttataaaatattttatttttaaa
tctacaataaaacaaattatatcattaaaataattggcatttgtgttact
tgtatttgaaatataacagccaagaaaaatctaccagttaagccctggca
ttgctgacatatccctttctatatttttcttgtgtctgagtgtttcttgc
ctgcaatgcctccagtagtataaacttatttctggtgttttgaacatagc
atgctaaatttcctctatggagtctaatgtgtgtatatccccatgcttac
ttaaaagctatcccaaagtgtaccaatgaatcatgcctggtattttaagc
atttcagaacttcaatataagaattagggagttttgaggggaagatttga
gggggccaatgtgtatagaaaatgtatctacaggtcgaaacaattatagt
aatttttccgaaattatatgccttagctataaccaaggaactctttttga
tttgacctctggaaattattgcagtgtacttcttcaccgtttaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87233770_87234797
seq2: B6Ng01-206J02.g_68_1112 (reverse)

seq1  CTCAAACGGTGA--GAGTACA-TGCAATAA-TTACAGAGTACAAATCAAA  46
      || |||||||||   |||||| |||||||| || |||||  |||||||||
seq2  CTTAAACGGTGAAGAAGTACACTGCAATAATTTCCAGAGGTCAAATCAAA  50

seq1  AAGAGTTCCTTGGTTATA-CTAA-GCATATTATTCTGGAAAAA-TACTAT  93
      |||||||||||||||||| |||| |||||| |||  ||||||| ||||||
seq2  AAGAGTTCCTTGGTTATAGCTAAGGCATATAATTTCGGAAAAATTACTAT  100

seq1  AATTGTTTCGA-CTGTAG-TACATTTTCTATACACATT-GCCCCCTC-AA  139
      ||||||||||| |||||| ||||||||||||||||||| |||||||| ||
seq2  AATTGTTTCGACCTGTAGATACATTTTCTATACACATTGGCCCCCTCAAA  150

seq1  TCTT-CCCTC-AAACT-CCTAATTCTTATATTGAAGTTCTGAAATGCTT-  185
      |||| ||||| ||||| |||||||||||||||||||||||||||||||| 
seq2  TCTTCCCCTCAAAACTCCCTAATTCTTATATTGAAGTTCTGAAATGCTTA  200

seq1  AAATACCAGGCATGATTCATTGGTACACTTTGGGATAGCTTTTAAGTAAG  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCAGGCATGATTCATTGGTACACTTTGGGATAGCTTTTAAGTAAG  250

seq1  CATGGGGATATACACACATTAGACTCCATAGAGGAAA-TTAGCATGCTAT  284
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CATGGGGATATACACACATTAGACTCCATAGAGGAAATTTAGCATGCTAT  300

seq1  GTTCAAAACACCAG-AATAAGTTTATACTACTGGAGGCATTGCAGGCAAG  333
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTCAAAACACCAGAAATAAGTTTATACTACTGGAGGCATTGCAGGCAAG  350

seq1  AAACACTCAGACACAAGAAAAATATAGAAAGGGATATGTCAGCAATGCCA  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTCAGACACAAGAAAAATATAGAAAGGGATATGTCAGCAATGCCA  400

seq1  GGGCTTAACTGGTAGATTTTTCTTGGCTGTTATATTTCAAATACAAGTAA  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTAACTGGTAGATTTTTCTTGGCTGTTATATTTCAAATACAAGTAA  450

seq1  CACAAATGCCAATTATTTTAATGATATAATTTGTTTTATTGTAGATTTAA  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGCCAATTATTTTAATGATATAATTTGTTTTATTGTAGATTTAA  500

seq1  AAATAAAATATTTTATAAGAAAATATGTTCATAAAGGGACCAAATGAGTA  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATATTTTATAAGAAAATATGTTCATAAAGGGACCAAATGAGTA  550

seq1  AAAGATAATTTGGTATATGCAAAGTAAAATTTTTATTTTTCAAATTCTTT  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAATTTGGTATATGCAAAGTAAAATTTTTATTTTTCAAATTCTTT  600

seq1  CAACTAAAACAAAGAATATGTTGAAGTTCCCATGCCTTTTCAAAGTATCA  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTAAAACAAAGAATATGTTGAAGTTCCCATGCCTTTTCAAAGTATCA  650

seq1  AACTGGAATTATATTTCCAGAAAGTTTTTTAAAAAAAATAATGTATGTTA  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAATTATATTTCCAGAAAGTTTTTTAAAAAAAATAATGTATGTTA  700

seq1  GAGTTTTGTTTGCCATGTTTTATATTCAAGTCTTTTAAGCAAATAGACAA  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTGTTTGCCATGTTTTATATTCAAGTCTTTTAAGCAAATAGACAA  750

seq1  AAGAAGTTTATGCTATAATGCATGCTATTTCGTTTAACATTCCAACTCAA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTTATGCTATAATGCATGCTATTTCGTTTAACATTCCAACTCAA  800

seq1  CATAATTTAGAGTACTAGAAAGGTAAAATAATAGAAAAAAATTCTGAGAT  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTAGAGTACTAGAAAGGTAAAATAATAGAAAAAAATTCTGAGAT  850

seq1  CAGATTGGCATGAACAACTATATGTGGGACTGCATCATGATTGTTAATTC  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGGCATGAACAACTATATGTGGGACTGCATCATGATTGTTAATTC  900

seq1  ATCTAGAAAATCCCAGTCAACCACAAATGGTAGTATCTGTAAGCAGTTGT  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAAAATCCCAGTCAACCACAAATGGTAGTATCTGTAAGCAGTTGT  950

seq1  GTTTGGATTGCACTCTAAAAATCTACCTAAGCATGCCCTGTTGAATGAAC  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGATTGCACTCTAAAAATCTACCTAAGCATGCCCTGTTGAATGAAC  1000

seq1  CTATAAGCATATGTAAACAAACCTCTATGATTTCTGTTTGAATTC  1028
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGCATATGTAAACAAACCTCTATGATTTCTGTTTGAATTC  1045