BAC Information

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BAC

Clone NameB6Ng01-206L14
Chromosome13 (Build37)
Map Location 81,899,826 - 81,900,918
singlet/doubletsinglet
Overlap genenone
Upstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98, Lysmd3, Polr3g, 2900024O10Rik
Downstream geneCetn3, LOC238756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206L14.b
ACCGA026069
length1,110
definitionB6Ng01-206L14.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctccgtacgagatgattatatttgaatgctgccaaaggacgat
tctttgattctatctaaaaaaagaaaactacaagttgaggggtttcaagg
ttatggcacgagaacatcctttctgatcgacagataacagagaagccacc
cgagaactggtgagaagcatgccttctcttcagctactctacaaggactg
aaaggagacctctcccacaaaaacaaggatgaccagagctctcaaatctg
gcttcacttctttaatggctaaagtcatcatctttttccactttatggat
taaaaagctacttcaggccctggcgtggtgatacacacctgggatatcag
cgctccccacggggccctttgatcccgagcttccttgcagactaggctac
gtaggaatcaagacagatggcaatggtgttggggctctttccgtttagga
ttgtgacattacaccttgtctactttactcaaaagttgaaggcatgaatg
ctcacttctgccccatcctcaccatagatattcattttctccttctcacc
cttatacatttgattcccttgggggttgccttctgaatgatctcctttca
atgtgaaaataaaagtatcgaacatgttattgttatactacttttttaat
gtgtatgaagttttacctggatgcataactatgtactgagttcatacctg
ttgccctgataggccagaaaaaggactcaaatacctttggactaaagtga
cagagagttgtaagctatcatatgtgcactgtgaatcgaacccatgacct
ctgggaaagtagctggactcatcagccctaaattataatacttttaaagt
gaaaacaataataatctttattttcatgcaaatatgaagtgaacacaaat
gggaagactttattcacctcattcattaagaagtgtcttaaagggaaact
ttgaataaacatgtatacatataataccaaccaaggatggccaaaacttt
gctgaacgatgcccaactgttaatatcctacaaagcatggtaaatgtgat
ttttttttctattttctgaaagggattcgctgaacagataaattaactaa
attgtactca
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81899826_81900918
seq2: B6Ng01-206L14.b_61_1152 (reverse)

seq1  TGAGTTACAAATTAGTTAAATTTATCTGTT-AGAGATACACTTTCAG-AA  48
      |||| ||||| |||||| |||||||||||| || ||  | ||||||| ||
seq2  TGAG-TACAATTTAGTT-AATTTATCTGTTCAGCGAATCCCTTTCAGAAA  48

seq1  ATAG-AAAAAAAATCACATTTACACTGCTTTGTAGGATATTAAACAGTTG  97
      |||| ||||||||||||||||||  |||||||||||||||| ||||||||
seq2  ATAGAAAAAAAAATCACATTTACCATGCTTTGTAGGATATT-AACAGTTG  97

seq1  GGCATCTGTCAGCAAAGTTTTTGGGCATCCTTGGTTGTATTTATATGTAT  147
      ||||||  ||||||||| |||||| ||||||||||||   ||||||||||
seq2  GGCATCGTTCAGCAAAG-TTTTGGCCATCCTTGGTTGGTATTATATGTAT  146

seq1  ACATGTTT-TTCAAAGTTT-CCTTTAAGCCACTTCTTAATGAATGAGGTG  195
      |||||||| |||||||||| |||||||| |||||||||||||||||||||
seq2  ACATGTTTATTCAAAGTTTCCCTTTAAGACACTTCTTAATGAATGAGGTG  196

seq1  AATAAAGTCTT-CCATTTGTGTTCACTTCATATTTGCATGAAAATAAAGA  244
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTCTTCCCATTTGTGTTCACTTCATATTTGCATGAAAATAAAGA  246

seq1  TTATTATTGTTTTCACTTTTAAAAGTATTATAATTTAGGGCTGATGAGTC  294
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTATTATTGTTTTCAC-TTTAAAAGTATTATAATTTAGGGCTGATGAGTC  295

seq1  CAGCTACTTTCCCAGAGGTCATGGGTTCGATTCACAGTGCACATATGATA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTACTTTCCCAGAGGTCATGGGTTCGATTCACAGTGCACATATGATA  345

seq1  GCTTACAACTCTCTGTAACTCTAGTCCAAAGGTATTTGAGTCCTTTTTCT  394
      |||||||||||||||| ||| |||||||||||||||||||||||||||||
seq2  GCTTACAACTCTCTGTCACTTTAGTCCAAAGGTATTTGAGTCCTTTTTCT  395

seq1  GGCCTCTCAGGGCAACAGGTATGAACACAGTACATAGTTATGCATCCAGG  444
      ||||| |||||||||||||||||||| |||||||||||||||||||||||
seq2  GGCCTATCAGGGCAACAGGTATGAACTCAGTACATAGTTATGCATCCAGG  445

seq1  TAAAACTTCATACACATTAAAAAAGTAGTATAACAATAACATGTTTGATA  494
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAAAACTTCATACACATTAAAAAAGTAGTATAACAATAACATGTTCGATA  495

seq1  CTTTTATTTTCACATTGAAATACTTTTCATTTAAAAGGCAAGCCAGAAGG  544
      ||||||||||||||||||||      ||||| | ||||||| ||  ||||
seq2  CTTTTATTTTCACATTGAAA-GGAGATCATTCAGAAGGCAACCCCCAAGG  544

seq1  CTATCAAATGTATAAGTTTAAATTAGAGAAAATGAATA-CTATGGT----  589
        ||||||||||||||  | |    ||||||||||||| |||||||    
seq2  GAATCAAATGTATAAGGGTGAGAAGGAGAAAATGAATATCTATGGTGAGG  594

seq1  CTGGGCTAGAAGAAGTGAGCATTCCTGCCTTCAACTTTTTGTGTAAAGTA  639
       ||||   | |||||||||||||| |||||||||| ||||| ||||||||
seq2  ATGGG---GCAGAAGTGAGCATTCATGCCTTCAAC-TTTTGAGTAAAGTA  640

seq1  GAAAAGGTGTAATGTGTAAAATCCTCTATGGTAAGAGACCCAACACAGCT  689
      || ||||||||||||  | ||||||  | || ||||| ||||||||   |
seq2  GACAAGGTGTAATGT-CACAATCCTAAACGGAAAGAGCCCCAACACCATT  689

seq1  GCCATCTGTCTTGATTCCTACGTAGCCTAGTCTGGCTTTGAA-CTCGGGA  738
      ||||||||||||||||||||||||||||||||| ||   ||| |||||||
seq2  GCCATCTGTCTTGATTCCTACGTAGCCTAGTCT-GCAAGGAAGCTCGGGA  738

seq1  TCCTACTACCTCGTGCCGAGCGCTGAAATTACAGGTGTGTATCACCACGC  788
      ||  |   || ||||  ||||||||| ||  |||||||||||||||||||
seq2  TCAAAGGGCCCCGTGGGGAGCGCTGATATCCCAGGTGTGTATCACCACGC  788

seq1  CAGGGCCTGATGAAGCTTTTTAATCCAAAAAGTGGAAAAAGATGATGACA  838
      |||||||||| | |||||||||||||| ||||||||||||||||||||| 
seq2  CAGGGCCTGAAGTAGCTTTTTAATCCATAAAGTGGAAAAAGATGATGACT  838

seq1  TTAGGCAGTAAAGAAGTGAAGACAGATTTGAGAGCACTGGTCATCTGTGT  888
      |||| || ||||||||||||| ||||||||||||| |||||||||  |||
seq2  TTAGCCATTAAAGAAGTGAAGCCAGATTTGAGAGCTCTGGTCATCCTTGT  888

seq1  TTTTGTGGGAGAGGTCTCCTTTCAGACCTTGTAGAGTAGCTGAAGAGAAG  938
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTTTGTGGGAGAGGTCTCCTTTCAGTCCTTGTAGAGTAGCTGAAGAGAAG  938

seq1  GCATGCTTCTCACCAGTGACTCGGGTGGCTTCTCTG-TCTCTGTCGATCA  987
      |||||||||||||||||  ||||||||||||||||| | |||||||||||
seq2  GCATGCTTCTCACCAGT-TCTCGGGTGGCTTCTCTGTTATCTGTCGATCA  987

seq1  GAAAGGATGTAAACGTGCCATAACCTTGAAACCCCTCTACTTGTAGTTTT  1037
      ||||||||||   |||||||||||||||||||||||| ||||||||||||
seq2  GAAAGGATGTTCTCGTGCCATAACCTTGAAACCCCTCAACTTGTAGTTTT  1037

seq1  CTTTTTTTAGATAGAATCAAAGAATAGTCCTTTGGCAGCATTTAAAATAT  1087
      ||||||||||||||||||||||||| |||||||||||||| || ||||||
seq2  CTTTTTTTAGATAGAATCAAAGAATCGTCCTTTGGCAGCA-TTCAAATAT  1086

seq1  AATCAT  1093
      ||||||
seq2  AATCAT  1092