BAC Information

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BAC

Clone NameB6Ng01-206O06
Chromosome13 (Build37)
Map Location 7,253,736 - 7,254,895
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516, LOC791083, LOC382722, Adarb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-206O06.bB6Ng01-206O06.g
ACCGA026188GA026189
length1,1651,155
definitionB6Ng01-206O06.b B6Ng01-206O06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgcttaaggtcatttttttttaacttttcttgtttctgtggca
gaatatctggcaaaacaactctgaaagaaaatgcttatattggatcactc
tttaagggaggaaatcctgacagaaggagctggtcacagtgtgtccacag
tcaggaaaaaagaagaaaaacataagtataaatgcattctctttattaat
ccaatcagtaccccagcctatgtgataggcacaaacacaggataagtctc
cccttcaactaacttaatctagaaacttcattatagacatgcccagacct
ttgtctcctgggtcattttagatcctgtcaaactgacaatattacctatg
atactgttctttacaattccatctgtttatcccacatccacaaaatagta
ctggtaaactccaaatgccattgatataaaagacagttactacttcctct
gctcatcctatcccatttttcctggtatcaaatgcaatttttttttgtgg
tagagagcaatattttaacatgagtttgagttttcattgacgaggtataa
tataatattaagctgtctgtctattagtgagaattctagttttaggtaca
gtgagataagatcgagatacaaaccttgagtttcttttctctccctcact
ccttttttgccaatttgttttgttctttttacttctatctcttcttcttt
catgttgtcttttaaagttacatgtatttatgtattttgtgtatatgtgt
gaccatatgtgagcattggaggaccacctatgtgaattggttttcttctt
ataccatataggtccagggtttgaactcagcatctcaggcatggcattag
ctggtgagctatctagctgttctatcttactaactttctttcttccctct
aatttttccttaatgcctctcttccttttcattcttatcttcctcccccc
tttttcttttcttattatcacgaacattttaaacatgtaaactaaaccat
gaaagtcaagcttatggataggatttagtggacatcacagtttgaagatt
cttattatttagacccatcccaacaatagaggcatgctcttgtgccattg
gattaaagcccagaggcaccaattgaactcaagatcacatagagcagctt
ttgaatgaaatgggg
gaattctttgtatatatgttcaagagatagcttggtcttgacatagatct
attcctgactttctgagaaactgtcatactgattgtcatagtggctgtac
aaggttgcattgccaccagcagtggaggagtgttcctcttgacccacagc
cttgccagcatgattcgtcagttgttttactgatactagccatactgaaa
gttgtaagatgaaatttcaaagtagttttactttgcatttccctgacagc
taaggataacaaatatttccttaagtgtttcttattcatatgaatatcct
ctgttgagaattctctagatctgttccccatttttcttatttgattattt
gggtgttttgatatcttatcccttcagttcattataattttagatattag
ttatcactggatgtgaatttttacccattctgtgggcaccattttttccc
caattaacagtgtttttttaccttacaggagattttcaggttcatgagac
cccatttattaattgctgattattgacagagctaaatttttttctttttt
tatattaggtattttcttcatttacatttccaaggcaatcccaaaagtcc
ctcatgccctacccactccccactcccctacccacccactaccacttctt
tgccctggtgttcccctgtacagaggcataaaaagtttgcaagaccaatg
ggcctctcttctcaatgatggccaactatgccatcttctgatacatatgc
agctagaaacacgagctctggggggtactggttagttcataacgttgttc
cacctatagggttgcagattcctttagctccttgggtactttttctagtc
ctccattgggagccctgtgatccatccaataggtgactgtgagcatccac
ttctgtgtttgctaggccctgcatagtctcacaagagacagctatatctg
ggttctttcagcaaatcttgctggtatatacatggtgtcagcgttggagc
tgattatgggatgatcctggtatgcagtctctagatggtcatctttcgtc
tcagctccaactagtctctgtaatctcatgggtattttgggtcccatcta
caaggtcaaggtccaggattggtctggtcttctggagttccaatgtgttt
tgcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7253736_7254895
seq2: B6Ng01-206O06.b_43_1207

seq1  GAATTCATGCTTAAGGTCATTTTTTTTTAACTTTTCTTGTTTCTGTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTTAAGGTCATTTTTTTTTAACTTTTCTTGTTTCTGTGGCA  50

seq1  GAATATCTGGCAAAACAACTCTGAAAGAAAATGCTTATATTGGATCACTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATCTGGCAAAACAACTCTGAAAGAAAATGCTTATATTGGATCACTC  100

seq1  TTTAAGGGAGGAAATCCTGACAGAAGGAGCTGGTCACAGTGTGTCCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGGAGGAAATCCTGACAGAAGGAGCTGGTCACAGTGTGTCCACAG  150

seq1  TCAGGAAAAAAGAAGAAAAACATAAGTATAAATGCATTCTCTTTATTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAAAAGAAGAAAAACATAAGTATAAATGCATTCTCTTTATTAAT  200

seq1  CCAATCAGTACCCCAGCCTATGTGATAGGCACAAACACAGGATAAGTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGTACCCCAGCCTATGTGATAGGCACAAACACAGGATAAGTCTC  250

seq1  CCCTTCAACTAACTTAATCTAGAAACTTCATTATAGACATGCCCAGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCAACTAACTTAATCTAGAAACTTCATTATAGACATGCCCAGACCT  300

seq1  TTGTCTCCTGGGTCATTTTAGATCCTGTCAAACTGACAATATTACCTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCTGGGTCATTTTAGATCCTGTCAAACTGACAATATTACCTATG  350

seq1  ATACTGTTCTTTACAATTCCATCTGTTTATCCCACATCCACAAAATAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTTCTTTACAATTCCATCTGTTTATCCCACATCCACAAAATAGTA  400

seq1  CTGGTAAACTCCAAATGCCATTGATATAAAAGACAGTTACTACTTCCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAAACTCCAAATGCCATTGATATAAAAGACAGTTACTACTTCCTCT  450

seq1  GCTCATCCTATCCCATTTTTCCTGGTATCAAATGCAATTTTTTTTTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCCTATCCCATTTTTCCTGGTATCAAATGCAATTTTTTTTTGTGG  500

seq1  TAGAGAGCAATATTTTAACATGAGTTTGAGTTTTCATTGACGAGGTATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGCAATATTTTAACATGAGTTTGAGTTTTCATTGACGAGGTATAA  550

seq1  TATAATATTAAGCTGTCTGTCTATTAGTGAGAATTCTAGTTTTAGGTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTAAGCTGTCTGTCTATTAGTGAGAATTCTAGTTTTAGGTACA  600

seq1  GTGAGATAAGATCGAGATACAAACCTTGAGTTTCTTTTCTCTCCCTCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATAAGATCGAGATACAAACCTTGAGTTTCTTTTCTCTCCCTCACT  650

seq1  CCTTTTTTGCCAATTTGTTTTGTTCTTTTTACTTCTATCTCTTCTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTTTGCCAATTTGTTTTGTTCTTTTTACTTCTATCTCTTCTTCTTT  700

seq1  CATGTTGTCTTTTAAAGTTACATGTATTTATGTATTTTGTGTATATGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTGTCTTTTAAAGTTACATGTATTTATGTATTTTGTGTATATGTGT  750

seq1  GACCATATGTGAGCATTGGAGGACCACCTATGTGAATTGGTTTTCTTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATATGTGAGCATTGGAGGACCACCTATGTGAATTGGTTTTCTTCTT  800

seq1  ATACCATATAGGTCCAGGGTTTGAACTCAGCATCTCAGGCATGGCATTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATATAGGTCCAGGGTTTGAACTCAGCATCTCAGGCATGGCATTAG  850

seq1  CTGGTGAGCTATCTAGCTGTTCTATCTTACTAACTTTCTTTCTTCCCTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGAGCTATCTAGCTGTTCTATCTTACTAACTTTCTTTCTTCCCTCT  900

seq1  CATTTTT-CTTAATGCCTCTCTTCCTTTTCCATTCTTATCTTCCTCCCCC  949
       |||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  AATTTTTCCTTAATGCCTCTCTTCCTTTT-CATTCTTATCTTCCTCCCCC  949

seq1  CTTTT--CTTTCTTATTATCAC-AACATTTTAAACATGTAAACTAAACCA  996
      |||||   |||||||||||||| |||||||||||||||||||||||||||
seq2  CTTTTTCTTTTCTTATTATCACGAACATTTTAAACATGTAAACTAAACCA  999

seq1  TGAAAGTCAAGC-TATGGATAGGATTTAGTGGACCATCAACAGTTTGAAG  1045
      |||||||||||| |||||||||||||||||||| |||| |||||||||||
seq2  TGAAAGTCAAGCTTATGGATAGGATTTAGTGGA-CATC-ACAGTTTGAAG  1047

seq1  A-TCTTA-TATTTAGACACATCCC-ACAATAGAAGGCATGCTC-TGTG-C  1090
      | ||||| ||||||||| |||||| ||||||| |||||||||| |||| |
seq2  ATTCTTATTATTTAGACCCATCCCAACAATAG-AGGCATGCTCTTGTGCC  1096

seq1  ATT-GATTAAAGCCCAGAGGCACCATTGAAACTCAAGATCACATAAGAAG  1139
      ||| ||||||||||||||||||||| |  ||||||||||||||| |||  
seq2  ATTGGATTAAAGCCCAGAGGCACCAATTGAACTCAAGATCACAT-AGA--  1143

seq1  GTAGGTTTTGAATG-AATGGGG  1160
      | || ||||||||| |||||||
seq2  GCAGCTTTTGAATGAAATGGGG  1165