BAC Information

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BAC

Clone NameB6Ng01-207G15
Chromosome13 (Build37)
Map Location 112,963,928 - 113,110,841
singlet/doubletdoublet
Overlap geneLOC100041161, LOC100041175, Ankrd55
Upstream gene4732495G21Rik, LOC100040640, EG621953, Gpbp1, LOC100040666, Mier3, Map3k1, LOC668181, LOC100040716
Downstream geneLOC100040725, Il6st, Il31ra, LOC100041240, Ddx4, 9130023D20Rik, Ppap2a, LOC100041282, Skiv2l2, Dhx29, LOC667756, Ccnu, EG622408, EG622422, 2310016C16Rik, Cdc20b, Gzma, 1700084D21Rik, Gzmk, Esm1, BC067074
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207G15.bB6Ng01-207G15.g
ACCGA026570GA026571
length1,1131,004
definitionB6Ng01-207G15.b B6Ng01-207G15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,109,772 - 113,110,841)(112,963,928 - 112,964,915)
sequence
gaattctatgaactgtgtctgtgccaactgatgtgatttttcttctttaa
ctagttagtttatgattttatcaagtattgatagtaatgcaattttagct
cataaatatagctaagaagtattttcctctttttgaaagaaatcatatga
aagtaacgctgattgttctggaaaatttttgtgaatggatcagagagatg
gctcagtgattaagaacatttgttgctcttccaaaggacctgggtttggt
tcccagcacccagaggttggctcacaaccatctgtacctctagttccaga
agatctgacaccctcttctgacctgggccaccaagcatgcacatggtata
cagacaaaattcaggcaaagcattcaaacacataaaataatgctaaacaa
taaataaataaataaataaataaataaataaatacatagtagaactctac
aggaccatcaatgcctgaaggtagtcctctttaaaattttttaaattata
aatttaattttctaaatacttataggaatatttaacttgttttgtaccag
gactgttaacaaccattaattaagtttattgttggtgtccactgtggtat
tttcatgtatagatgaacagtagtttctaagggaagctaacctcttctcc
tcctcctctcaatttattttattttgagcaattaatccattcatctaaat
tgtcaaatttacgtgtgtgaagttgtttgcagcatttctgtggggactgt
agtgatgtccttgcattcccaagagcaggaatttgcatctccttcagtta
gtttttcttgacagtgacagtgctacaggttgttccttggtttttttaga
ttttttttttccctattgcttttgtttttgatttcatctttttttgtttt
tttgttttttcaagacagggtttctctgtgtagccctggctgtcctggaa
ctcactttgtagaccaggctggcctcgaattcagaaatcctcctgcctct
gcctcccgagtgctgagatttaaaagtgttgcaccaacacgcccagttta
atttcaatctttctggttcctcctctccccctccgtgtgttgagattatt
tcgccttctccct
gaattcaacataatggcagggtgttaagttgcttagaaacaagcaattgg
gataggaacggaaaggggaagatcagaaaatgtgtccttaaacacagtct
agaaagctcaaacggcctcttgggtttctgaaaggtaatgatttcttgga
aatagtaaagagaaaacagcccaaacatcattattaaagtttatagaatg
taatagttataataaaaatgcttttcagtcctatgaatgcagaaagacac
catttatttcaatgaatccatcagtgcagcctcacctcttcaggcacaga
gatcggtgtttgtatctggctcagacgggatcccgagaaagctgttaaga
gatctgcagtggaagttgaagttgtgcaggagactgctcactgcactggc
aggcatcttcttgcttcactcataacgcccatttggcatgtaggaagacc
agaaggctgtcaaccgccagcctctaaaagcagaagggctggagagatgg
ctcagccgcgaaaggcaaaggccctgagcgagcagattcagtgtgagcag
gagaagtagagaaacaaatagtctaactttattagcaattaccttttgtc
ttacaaggttttcttctcctataatttggttgttgtctttaagttactgg
gggaatatatcacccaggctaaaacattggtcactattaaaaagtactca
gaggagttggggatgcgactcagggagtgaggtgcttgtcaggtaagcat
gaggagcagagatcaaatcccctagcgcccatgtaaaatgatgcagtgag
gcagcctgcctgggatcccagagcatggaaaggtagaaagaagggaaact
ttctgagcaaagtggtcagcctagacttcccagagcctcacggaggttcc
actgaggaaaccttgtctcagcatgtaaatcagacagcaacctaaaaaaa
agacatttgacatttgaccttaaagattcgtgcatgaacacattgcaggc
acaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_113109772_113110841
seq2: B6Ng01-207G15.b_73_1143 (reverse)

seq1  AGGGAGAAGAGCGAAATAATCTCAAAACACACGGAGGGGGAGAGAGGAAA  50
      ||||||||| |||||||||||||  |||||||||||||||||||  | ||
seq2  AGGGAGAAG-GCGAAATAATCTC--AACACACGGAGGGGGAGAGGAGGAA  47

seq1  CAAGAAAAGATGAAATT-AACCGGGCGTGGTGGTGC-ACACTTTT-AATC  97
      | |||||   ||||||| ||| ||||||| |||||| |||||||| ||||
seq2  CCAGAAAGATTGAAATTAAACTGGGCGTGTTGGTGCAACACTTTTAAATC  97

seq1  TCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAATTCGAGGCCAGCC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCACTCGGGAGGCAGAGGCAGGAGGATTTCTGAATTCGAGGCCAGCC  147

seq1  TGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCT  197

seq1  GTCTTGAAAAAACAAAAAAACAAAAAAAGATGAAATCAAAAACAAAAGCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGAAAAAACAAAAAAACAAAAAAAGATGAAATCAAAAACAAAAGCA  247

seq1  ATAGGG-AAAAAAAAATCTAAAAAAACCAAGGAACAACCTGTAGCACTGT  296
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGAAAAAAAAAATCTAAAAAAACCAAGGAACAACCTGTAGCACTGT  297

seq1  CACTGTCAAGAAAAACTAACTGAAGGAGATGCAAATTCCTGCTCTTGGGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCAAGAAAAACTAACTGAAGGAGATGCAAATTCCTGCTCTTGGGA  347

seq1  ATGCAAGGACATCACTACAGTCCCCACAGAAATGCTGCAAACAACTTCAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGGACATCACTACAGTCCCCACAGAAATGCTGCAAACAACTTCAC  397

seq1  ACACGTAAATTTGACAATTTAGATGAATGGATTAATTGCTCAAAATAAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGTAAATTTGACAATTTAGATGAATGGATTAATTGCTCAAAATAAAA  447

seq1  TAAATTGAGAGGAGGAGGAGAAGAGGTTAGCTTCCCTTAGAAACTACTGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGAGAGGAGGAGGAGAAGAGGTTAGCTTCCCTTAGAAACTACTGT  497

seq1  TCATCTATACATGAAAATACCACAGTGGACACCAACAATAAACTTAATTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATACATGAAAATACCACAGTGGACACCAACAATAAACTTAATTA  547

seq1  ATGGTTGTTAACAGTCCTGGTACAAAACAAGTTAAATATTCCTATAAGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTGTTAACAGTCCTGGTACAAAACAAGTTAAATATTCCTATAAGTA  597

seq1  TTTAGAAAATTAAATTTATAATTTAAAAAATTTTAAAGAGGACTACCTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAATTAAATTTATAATTTAAAAAATTTTAAAGAGGACTACCTTC  647

seq1  AGGCATTGATGGTCCTGTAGAGTTCTACTATGTATTTATTTATTTATTTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGATGGTCCTGTAGAGTTCTACTATGTATTTATTTATTTATTTA  697

seq1  TTTATTTATTTATTTATTGTTTAGCATTATTTTATGTGTTTGAATGCTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTTATTTATTGTTTAGCATTATTTTATGTGTTTGAATGCTTT  747

seq1  GCCTGAATTTTGTCTGTATACCATGTGCATGCTTGGTGGCCCAGGTCAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAATTTTGTCTGTATACCATGTGCATGCTTGGTGGCCCAGGTCAGA  797

seq1  AGAGGGTGTCAGATCTTCTGGAACTAGAGGTACAGATGGTTGTGAGCCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTGTCAGATCTTCTGGAACTAGAGGTACAGATGGTTGTGAGCCAA  847

seq1  CCTCTGGGTGCTGGGAACCAAACCCAGGTCCTTTGGAAGAGCAACAAATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGGTGCTGGGAACCAAACCCAGGTCCTTTGGAAGAGCAACAAATG  897

seq1  TTCTTAATCACTGAGCCATCTCTCTGATCCATTCACAAAAATTTTCCAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAATCACTGAGCCATCTCTCTGATCCATTCACAAAAATTTTCCAGA  947

seq1  ACAATCAGCGTTACTTTCATATGATTTCTTTCAAAAAGAGGAAAATACTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAGCGTTACTTTCATATGATTTCTTTCAAAAAGAGGAAAATACTT  997

seq1  CTTAGCTATATTTATGAGCTAAAATTGCATTACTATCAATACTTGATAAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGCTATATTTATGAGCTAAAATTGCATTACTATCAATACTTGATAAA  1047

seq1  ATCATAAACTAACTAGTTAAAGAA  1070
      ||||||||||||||||||||||||
seq2  ATCATAAACTAACTAGTTAAAGAA  1071

seq1: chr13_112963928_112964915
seq2: B6Ng01-207G15.g_65_1068

seq1  GAATTCAACATAATGGCAGGGTGTTAAGTTGCTTAGAAACAAGCAATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATAATGGCAGGGTGTTAAGTTGCTTAGAAACAAGCAATTGG  50

seq1  GATAGGAACGGAAAGGGGAAGATCAGAAAATGTGTCCTTAAACACAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGAACGGAAAGGGGAAGATCAGAAAATGTGTCCTTAAACACAGTCT  100

seq1  AGAAAGCTCAAACGGCCTCTTGGGTTTCTGAAAGGTAATGATTTCTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCTCAAACGGCCTCTTGGGTTTCTGAAAGGTAATGATTTCTTGGA  150

seq1  AATAGTAAAGAGAAAACAGCCCAAACATCATTATTAAAGTTTATAGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTAAAGAGAAAACAGCCCAAACATCATTATTAAAGTTTATAGAATG  200

seq1  TAATAGTTATAATAAAAATGCTTTTCAGTCCTATGAATGCAGAAAGACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTTATAATAAAAATGCTTTTCAGTCCTATGAATGCAGAAAGACAC  250

seq1  CATTTATTTCAATGAATCCATCAGTGCAGCCTCACCTCTTCAGGCACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTCAATGAATCCATCAGTGCAGCCTCACCTCTTCAGGCACAGA  300

seq1  GATCGGTGTTTGTATCTGGCTCAGACGGGATCCCGAGAAAGCTGTTAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCGGTGTTTGTATCTGGCTCAGACGGGATCCCGAGAAAGCTGTTAAGA  350

seq1  GATCTGCAGTGGAAGTTGAAGTTGTGCAGGAGACTGCTCACTGCACTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCAGTGGAAGTTGAAGTTGTGCAGGAGACTGCTCACTGCACTGGC  400

seq1  AGGCATCTTCTTGCTTCACTCATAACGCCCATTTGGCATGTAGGAAGACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCTTCTTGCTTCACTCATAACGCCCATTTGGCATGTAGGAAGACC  450

seq1  AGAAGGCTGTCAACCGCCAGCCTCTAAAAGCAGAAGGGCTGGAGAGATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTGTCAACCGCCAGCCTCTAAAAGCAGAAGGGCTGGAGAGATGG  500

seq1  CTCAGCCGCGAAAGGCAAAGGCCCTGAGCGAGCAGATTCAGTGTGAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCGCGAAAGGCAAAGGCCCTGAGCGAGCAGATTCAGTGTGAGCAG  550

seq1  GAGAAGTAGAGAAACAAATAGTCTAACTTTATTAGCAATTACCTTTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTAGAGAAACAAATAGTCTAACTTTATTAGCAATTACCTTTTGTC  600

seq1  TTACAAGGTTTTCTTCTCCTATAATTTGGTTGTTGTCTTTAAGTTACTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGGTTTTCTTCTCCTATAATTTGGTTGTTGTCTTTAAGTTACTGG  650

seq1  GGGAATATATCACCCAGGCTAAAACATTGGTCACTATTAAAAAGTACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATATCACCCAGGCTAAAACATTGGTCACTATTAAAAAGTACTCA  700

seq1  GAGGAGTTGGGGATGCGACTCAGGGAGTGAGGTGCTTGTCAGGTAAGCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGTTGGGGATGCGACTCAGGGAGTGAGGTGCTTGTCAGGTAAGCAT  750

seq1  GAGGAGCAGAGATCAAAT-CCCTAGCGCCCATGT-AAATGATGCAGTGAG  798
      |||||||||||||||||| ||||||||||||||| |||||||||||||||
seq2  GAGGAGCAGAGATCAAATCCCCTAGCGCCCATGTAAAATGATGCAGTGAG  800

seq1  GCAGCCTGCCTGGGATCCCAGAGCATGG-AAGGTAGAAAGAAGGGAA--C  845
      |||||||||||||||||||||||||||| ||||||||||||||||||   
seq2  GCAGCCTGCCTGGGATCCCAGAGCATGGAAAGGTAGAAAGAAGGGAAACT  850

seq1  TTCTGAGCAAAGTGGTCAG-CTAGAC-TCCCAGAGCC-CACGGA-GTTCC  891
      ||||||||||||||||||| |||||| |||||||||| |||||| |||||
seq2  TTCTGAGCAAAGTGGTCAGCCTAGACTTCCCAGAGCCTCACGGAGGTTCC  900

seq1  ACTGAGGAAACC-TGTCTCAGCATGTAAATCAGACAGCAACC--AAAAAA  938
      |||||||||||| |||||||||||||||||||||||||||||  ||||||
seq2  ACTGAGGAAACCTTGTCTCAGCATGTAAATCAGACAGCAACCTAAAAAAA  950

seq1  AGACA-TTGACA-TTGACCTTAAAGATCCGTGCATG-ACACA-TGCAGGC  984
      ||||| |||||| |||||||||||||| |||||||| ||||| |||||||
seq2  AGACATTTGACATTTGACCTTAAAGATTCGTGCATGAACACATTGCAGGC  1000

seq1  ACAA  988
      ||||
seq2  ACAA  1004