BAC Information

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BAC

Clone NameB6Ng01-207J02
Chromosome13 (Build37)
Map Location 15,835,627 - 15,836,709
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665099, LOC670994, EG625121, Gli3
Downstream geneLOC665157, Inhba, LOC625181, LOC665191
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207J02.bB6Ng01-207J02.g
ACCGA026679GA026680
length8711,073
definitionB6Ng01-207J02.b B6Ng01-207J02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggtggaatttatggggtcactgaagtatactatcatatcat
ctgaaaatagtaatattttgacttcttcctttccattttgtatccctttg
atctccttttgttgtctaattgctctggctagaactccaagtactatatt
gaatagataggaataaaataggcagccttgtctagtccctgattttagtc
agattacttcaagtttctctctgtttagtctgatgttggctactggtttg
ctgtatattgcttttactatgtttagttatggaccctcaattcctgatct
ttccaagacttttaacatgaagggatgctgaattttgtcaagtgcttttt
cagcatctaaagaaatgatcatgtgggttttttttctttgagtttgttta
tgtagtgtattatgttgatggatttccatatattgaaccatccctgcatc
cctaggatgaagcctacttgatcggggtgaatgatcattttgatgtgttc
ttggattcagtttgtgagaattttattgagtatttttgcatcaatattca
tgggggaaattggtctaaagttctctttctttgttgggtctttgtgtggt
tctggtatcagtgtaactgtggcttcatagaacgaatctggcagtgttcc
ttctctttctattttgtggaacagttttgaagagtatttatttggtattt
aggtattctctgaaggtctggtagaattctgcactaaacccatccgatcc
tggggcttttattttaattttttattttatttatttttttagttgcgaga
cttttagtgactgcttctttaggggttataggacttttttaatggttaat
ctgaatcttgttttaactttg

gaattcctttttttcttggaaaccaagaggttcagaacaaagaccaagat
gtgcctggaactctgagatcccaggtctctggtaaagccttgatggaggc
tgacatttggacacagtatcaacaccaccaatagctaaatataagacata
cacatgctgaagcatcgaagttttttcgaggactcataattgtagataca
aaatgcttatccctgaaatgataagaagtgcacaatggaaattaggattt
cccccccacacacacacacactcggtcaatatttatttaattacagattg
ttttgtttcaaggcctcttagatcttcctattatttcctacttccctctt
gaaaatttagatggaaaccccacctcctcaaatctcactgatggtttaac
actgtgaagttacctgtattcactttctttttgttgatactgatgaatta
agggtaatttagaatttcaatggatcctttattcaatttaactttcccaa
gttgcttttctaagacatttcccctcctattccaatctgtagctccatgc
agtcagtacaaagttaagacatccccctttccctccttcatagttcttga
gaccctaaaggcaagcatgtgacccttaaaaggctaatttgaatcaaatt
agagccactgggactatctatttgatgcatcttcattccctcttctaaaa
cttagttcagatccctaataaaatatatgccaaggcagagggagaaaata
tgtagatattggtggaaagttttaattctcatatttagcaggtaacctta
acttattccagccactggaatacaaaaattcatataaaattataaagtgc
aacaaagacaaggatccactattataactacggagttttacgtccttctc
ttaatgtggcatttggggctagatttttaattttatttaattttatttta
ataaaatatctcctttaatttacattcaaatgtatcacctttcctaggtt
cctcccaaccccctaatccttctccttctccctgctcccaacctccactc
ctgcttcctgacaggcaattccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15835627_15836709
seq2: B6Ng01-207J02.g_65_1137

seq1  GAATTCCTTTTTTTCTTGGAAACCAAGAGGTTCAGAACAAAGACCAAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTTTTCTTGGAAACCAAGAGGTTCAGAACAAAGACCAAGAT  50

seq1  GTGCCTGGAACTCTGAGATCCCAGGTCTCTGGTAAAGCCTTGATGGAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGAACTCTGAGATCCCAGGTCTCTGGTAAAGCCTTGATGGAGGC  100

seq1  TGACATTTGGACACAGTATCAACACCACCAATAGCTAAATATAAGACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTGGACACAGTATCAACACCACCAATAGCTAAATATAAGACATA  150

seq1  CACATGCTGAAGCATCGAAGTTTTTTCGAGGACTCATAATTGTAGATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGCTGAAGCATCGAAGTTTTTTCGAGGACTCATAATTGTAGATACA  200

seq1  AAATGCTTATCCCTGAAATGATAAGAAGTGCACAATGGAAATTAGGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTTATCCCTGAAATGATAAGAAGTGCACAATGGAAATTAGGATTT  250

seq1  CCCCCCCACACACACACACACTCGGTCAATATTTATTTAATTACAGATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCACACACACACACACTCGGTCAATATTTATTTAATTACAGATTG  300

seq1  TTTTGTTTCAAGGCCTCTTAGATCTTCCTATTATTTCCTACTTCCCTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCAAGGCCTCTTAGATCTTCCTATTATTTCCTACTTCCCTCTT  350

seq1  GAAAATTTAGATGGAAACCCCACCTCCTCAAATCTCACTGATGGTTTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTTAGATGGAAACCCCACCTCCTCAAATCTCACTGATGGTTTAAC  400

seq1  ACTGTGAAGTTACCTGTATTCACTTTCTTTTTGTTGATACTGATGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAGTTACCTGTATTCACTTTCTTTTTGTTGATACTGATGAATTA  450

seq1  AGGGTAATTTAGAATTTCAATGGATCCTTTATTCAATTTAACTTTCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAATTTAGAATTTCAATGGATCCTTTATTCAATTTAACTTTCCCAA  500

seq1  GTTGCTTTTCTAAGACATTTCCCCTCCTATTCCAATCTGTAGCTCCATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTTTCTAAGACATTTCCCCTCCTATTCCAATCTGTAGCTCCATGC  550

seq1  AGTCAGTACAAAGTTAAGACATCCCCCTTTCCCTCCTTCATAGTTCTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTACAAAGTTAAGACATCCCCCTTTCCCTCCTTCATAGTTCTTGA  600

seq1  GACCCTAAAGGCAAGCATGTGACCCTTAAAAGGCTAATTTGAATCAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTAAAGGCAAGCATGTGACCCTTAAAAGGCTAATTTGAATCAAATT  650

seq1  AGAGCCACTGGGACTATCTATTTGATGCATCTTCATTCCCTCTTCTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACTGGGACTATCTATTTGATGCATCTTCATTCCCTCTTCTAAAA  700

seq1  CTTAGTTCAGATCCCTAATAAAATATATGCCAAGGCAGAGGGAGAAAATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTCAGATCCCTAATAAAATATATGCCAAGGCAGAGGGAGAAAATA  750

seq1  TGTAGATATTGGTGGAAAGTTTTAATTCTCATATTTAGCAGGTAACCTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATATTGGTGGAAAGTTTTAATTCTCATATTTAGCAGGTAACCTTA  800

seq1  ACTTATTCCAGCCACTGGAATACAAAAATTCATATAAAATTATAAAGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTCCAGCCACTGGAATACAAAAATTCATATAAAATTATAAAGTGC  850

seq1  AACAAAGACAAGGATCCACTATTATAACTACGGAGTTTTACGTCCTTCTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGACAAGGATCCACTATTATAACTACGGAGTTTTACGTCCTTCTC  900

seq1  TTAATGTGGCATTTGGGGCTAGATTTTT-ATTTTATTTTATTTTATTTTT  949
      |||||||||||||||||||||||||||| ||||||||| |||||||||| 
seq2  TTAATGTGGCATTTGGGGCTAGATTTTTAATTTTATTTAATTTTATTTTA  950

seq1  ATTAGATATTTTCTTT-ATTTACATTTCAAATGTTATCACCTTTCCTAGT  998
      || | |||| | |||| ||||||| |||||||| ||||||||||||||| 
seq2  ATAAAATATCTCCTTTAATTTACA-TTCAAATG-TATCACCTTTCCTAGG  998

seq1  TTCCCTTCCCCAAACCCCCTAATCCTCTCCCCTCTTCCCCTGCTCCCCAA  1048
      ||||  ||||  ||||||||||||||   || |||  ||||||| |||||
seq2  TTCC--TCCC--AACCCCCTAATCCTTCTCCTTCT--CCCTGCT-CCCAA  1041

seq1  CCCTCCCACTCCTGCTTCCTGGCCCAGGC-ATTCCC  1083
      ||   ||||||||||||||||   ||||| ||||||
seq2  CC--TCCACTCCTGCTTCCTG--ACAGGCAATTCCC  1073


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