BAC Information

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BAC

Clone NameB6Ng01-208B16
Chromosome13 (Build37)
Map Location 4,867,616 - 4,978,825
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208B16.bB6Ng01-208B16.g
ACCGA027075GA027076
length1,004166
definitionB6Ng01-208B16.b B6Ng01-208B16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,977,817 - 4,978,825)(4,867,616 - 4,867,781)
sequence
gaattctcctgtttctagaaaacatgctaaggcaactagttcagacaggg
cctcaagttgatgatttcatttcaaatttgttgaaacaaaaaacagattt
gctttctttctacatccaagttttccttacaaacacttatagtcacttct
atataactgggtgcctaaggatttagggcaaacaacaatctgattaatgc
aataattatttaatatttgttagtttatttaagtggcttctttaaatttt
atttttgctgggtgttggtcctggtgatagtgccaggagctttgtgccct
ctgagcattgtgctctacccctgccaatctcttgttaacttttgatattt
ttaaaaataaaaactttatgcatgtgttgaaatttccatgtatgcattca
aatttatcactatacagttttactattttaacttctctgggtttctatcc
tctatctcttattctgtttcccacttatatcacttatttgtacttatatc
gcattaaatttatttctcctgtcagcaaaatcttgttggcatctgcaatg
gtgtctgggtttggaggttgtctatgggatggatccccaggtggggcagt
ctctggatggtcattccttcagtctcagctctgaactttgtctttgtaac
tccttcttagctgccttctgagaggctctgccagtgcctggcaaatacag
aaatggatgctcacagtcatctattggacagagcacagggtccccaatga
aggagctagagaaagtacccaaggagctgaaggggtttgcagccctacag
gaggaacaacaatatgaactaaccagtacctcagagctccctgggactaa
accaccaatcaaagaaaatacgtggtgagacttgtgcctctagctgcata
tgtagcagaggatggcttagtcggtcatcagtggaggagaggcccttggt
cttgtgaagttctatgccccaatatagggaatgccagggcaaagagcaga
gtgg
agcagaagtatgggtcctgttttcacatttattgtattagcccatgtctt
tttattagggaattgagtccattattattgagagatatcaaggaccaatg
ttcattaatttctgtcattttgttgctgttgctattggaggtggtagagg
tggtagtggtggtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4977817_4978825
seq2: B6Ng01-208B16.b_47_1050 (reverse)

seq1  CCACTCCTGCTTCTTTGCCCTGGCATTCCCCTATATTGGGGCATAGAACC  50
      ||||| |||| |||||||||||||||| |||||||||||||||||||| |
seq2  CCACT-CTGC-TCTTTGCCCTGGCATT-CCCTATATTGGGGCATAGAA-C  46

seq1  TTCACAAGACCAAGGGCCTCTCCTCCCACTGATGACCGACTAAGCCATCC  100
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTCACAAGACCAAGGGCCTCTCCT-CCACTGATGACCGACTAAGCCATCC  95

seq1  TCTGCTACATATGCAGCTAGAGGCACAAGTCTCACCACGTATTTTCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACATATGCAGCTAGAGGCACAAGTCTCACCACGTATTTTCTTTG  145

seq1  ATTGGTGGTTTAGTCCCAGGGAGCTCTGAGGTACTGGTTAGTTCATATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGGTTTAGTCCCAGGGAGCTCTGAGGTACTGGTTAGTTCATATTG  195

seq1  TTGTTCCTCCTGTAGGGCTGCAAACCCCTTCAGCTCCTTGGGTACTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTCCTGTAGGGCTGCAAACCCCTTCAGCTCCTTGGGTACTTTCT  245

seq1  CTAGCTCCTTCATTGGGGACCCTGTGCTCTGTCCAATAGATGACTGTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCCTTCATTGGGGACCCTGTGCTCTGTCCAATAGATGACTGTGAG  295

seq1  CATCCATTTCTGTATTTGCCAGGCACTGGCAGAGCCTCTCAGAAGGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTTCTGTATTTGCCAGGCACTGGCAGAGCCTCTCAGAAGGCAGC  345

seq1  TAAGAAGGAGTTACAAAGACAAAGTTCAGAGCTGAGACTGAAGGAATGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGGAGTTACAAAGACAAAGTTCAGAGCTGAGACTGAAGGAATGAC  395

seq1  CATCCAGAGACTGCCCCACCTGGGGATCCATCCCATAGACAACCTCCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGAGACTGCCCCACCTGGGGATCCATCCCATAGACAACCTCCAAA  445

seq1  CCCAGACACCATTGCAGATGCCAACAAGATTTTGCTGACAGGAGAAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACACCATTGCAGATGCCAACAAGATTTTGCTGACAGGAGAAATAA  495

seq1  ATTTAATGCGATATAAGTACAAATAAGTGATATAAGTGGGAAACAGAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATGCGATATAAGTACAAATAAGTGATATAAGTGGGAAACAGAATA  545

seq1  AGAGATAGAGGATAGAAACCCAGAGAAGTTAAAATAGTAAAACTGTATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGAGGATAGAAACCCAGAGAAGTTAAAATAGTAAAACTGTATAG  595

seq1  TGATAAATTTGAATGCATACATGGAAATTTCAACACATGCATAAAGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAATTTGAATGCATACATGGAAATTTCAACACATGCATAAAGTTTT  645

seq1  TATTTTTAAAAATATCAAAAGTTAACAAGAGATTGGCAGGGGTAGAGCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAAAAATATCAAAAGTTAACAAGAGATTGGCAGGGGTAGAGCAC  695

seq1  AATGCTCAGAGGGCACAAAGCTCCTGGCACTATCACCAGGACCAACACCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCAGAGGGCACAAAGCTCCTGGCACTATCACCAGGACCAACACCC  745

seq1  AGCAAAAATAAAATTTAAAGAAGCCACTTAAATAAACTAACAAATATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAATAAAATTTAAAGAAGCCACTTAAATAAACTAACAAATATTAA  795

seq1  ATAATTATTGCATTAATCAGATTGTTGTTTGCCCTAAATCCTTAGGCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTATTGCATTAATCAGATTGTTGTTTGCCCTAAATCCTTAGGCACC  845

seq1  CAGTTATATAGAAGTGACTATAAGTGTTTGTAAGGAAAACTTGGATGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATATAGAAGTGACTATAAGTGTTTGTAAGGAAAACTTGGATGTAG  895

seq1  AAAGAAAGCAAATCTGTTTTTTGTTTCAACAAATTTGAAATGAAATCATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGCAAATCTGTTTTTTGTTTCAACAAATTTGAAATGAAATCATC  945

seq1  AACTTGAGGCCCTGTCTGAACTAGTTGCCTTAGCATGTTTTCTAGAAACA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAGGCCCTGTCTGAACTAGTTGCCTTAGCATGTTTTCTAGAAACA  995

seq1  GGAGAATTC  1009
      |||||||||
seq2  GGAGAATTC  1004

seq1: chr13_4867616_4867781
seq2: B6Ng01-208B16.g_68_233

seq1  AGCAGAAGTATGGGTCCTGTTTTCACATTTATTGTATTAGCCCATGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAAGTATGGGTCCTGTTTTCACATTTATTGTATTAGCCCATGTCTT  50

seq1  TTTATTAGGGAATTGAGTCCATTATTATTGAGAGATATCAAGGACCAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAGGGAATTGAGTCCATTATTATTGAGAGATATCAAGGACCAATG  100

seq1  TTCATTAATTTCTGTCATTTTGTTGCTGTTGCTATTGGAGGTGGTAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAATTTCTGTCATTTTGTTGCTGTTGCTATTGGAGGTGGTAGAGG  150

seq1  TGGTAGTGGTGGTGTG  166
      ||||||||||||||||
seq2  TGGTAGTGGTGGTGTG  166