BAC Information

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BAC

Clone NameB6Ng01-208J09
Chromosome13 (Build37)
Map Location 67,462,143 - 67,463,201
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik
Downstream geneZfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208J09.bB6Ng01-208J09.g
ACCGA027426GA027427
length1,059741
definitionB6Ng01-208J09.b B6Ng01-208J09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccgtctctcatgtgagcctgtcatcgttcatatttggcaatat
ttgaacatcagtggtatccgccttgaacttccgttatttctccgaagcag
aacaccgagataattccttcttgaatacaaaggtatcagaaatatgttca
tagcattgccaaatgaggtcggtatattaaagaagttacactggaaacat
acaatattgagaattcccatctcttcttgggaaggtttattcctgtgaag
ttcaagcttgagtcaaagttacaaaccccattgcagaaaaggcttcatac
ttccctgatatattatgattcaaaaggaagctgtttcagagcaaagactg
tgcagagtccctattgagttctttgtcagggagtgtgtttacctatggat
gcagaacaccttcctcgatttagagaaactagagtcaagaagcagtacat
tcacctggacacttgattggcatgtctgtttagaatgaggtcatgagtgg
tctgtcctcctcctgaatattgcagtggaaggcattgtcagcaaccacaa
ggacagaatttctgagcatagcaagttttctaatatgtgtatgtgttgag
gttcggtgtgttgctatgttttgttatgctaaattctctactcaaaggtc
tagactctctactgacttctcacatttacaaggttctgttgtgtaaacct
tgttccttgatttaaaactactggataaatcaaattggctacagccaatt
actggagggatttgaggcaggtgagttttgagttagctggtaggaggtgg
agaagagagagaaggaagagacaccaggacaaggaggaggaatgggaaaa
aaaggacgaagctgccctggagcagacggaccatgagcatgtggccagga
gaaactgcaactttccactggaatggcagccagaacagcagttagaagag
tagattaagggtttgcagctcagtaattgtcaaagccaaatgaaataacc
tatccgaattgagttatttgtaagcgtaacccttaaattggttatattac
acaatgtat
gaattcttcccctaggcacatctgatcctgattgctcaacattagttgca
tgtctcacttaaactgtagcaagagccatgcagccactgtcaacacagga
aaatctggctgtattaaattttgttcttgaatgctcaacctgatcagcct
tagttgcatgccttgcttcctatagccagtacaatgcacactttttctcc
ccaaattattggttttgttgtgtcccctttcaggcatcaattatgtgtgt
gacagacatttcatggagagatgcaaaaggtcaacacatatatgcacgca
cgcgcacacacacacagacaaaaacaaacatttacaacacagcctgactg
aggcttagtattgggtggggcagcaggaagtgtgccgttaggttgtccta
gaaatgacagggtaacggcgcccatggtacatgcaacagtatggctgcct
ttaaaaaagcctgaacactgataacagcaatggacatgctaaaatgagag
agggaaatcttaccgagagagaactagaagcaactaatgagtgctataag
agggagaattaatcttcctcagagaggtgtctgctaactggttatccaag
gccaagtgatcaatcctgaatataaaagtaaccctgaatggactcagcag
gttgcatttgcatattcattcacttacatatatgtaacaataataaagag
actatgaatttgagggggaggaaggaggaatatgggaagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67462143_67463201
seq2: B6Ng01-208J09.b_46_1104

seq1  GAATTCTCCGTCTCTCATGTGAGCCTGTCATCGTTCATATTTGGCAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGTCTCTCATGTGAGCCTGTCATCGTTCATATTTGGCAATAT  50

seq1  TTGAACATCAGTGGTATCCGCCTTGAACTTCCGTTATTTCTCCGAAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACATCAGTGGTATCCGCCTTGAACTTCCGTTATTTCTCCGAAGCAG  100

seq1  AACACCGAGATAATTCCTTCTTGAATACAAAGGTATCAGAAATATGTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCGAGATAATTCCTTCTTGAATACAAAGGTATCAGAAATATGTTCA  150

seq1  TAGCATTGCCAAATGAGGTCGGTATATTAAAGAAGTTACACTGGAAACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTGCCAAATGAGGTCGGTATATTAAAGAAGTTACACTGGAAACAT  200

seq1  ACAATATTGAGAATTCCCATCTCTTCTTGGGAAGGTTTATTCCTGTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATTGAGAATTCCCATCTCTTCTTGGGAAGGTTTATTCCTGTGAAG  250

seq1  TTCAAGCTTGAGTCAAAGTTACAAACCCCATTGCAGAAAAGGCTTCATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCTTGAGTCAAAGTTACAAACCCCATTGCAGAAAAGGCTTCATAC  300

seq1  TTCCCTGATATATTATGATTCAAAAGGAAGCTGTTTCAGAGCAAAGACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGATATATTATGATTCAAAAGGAAGCTGTTTCAGAGCAAAGACTG  350

seq1  TGCAGAGTCCCTATTGAGTTCTTTGTCAGGGAGTGTGTTTACCTATGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGTCCCTATTGAGTTCTTTGTCAGGGAGTGTGTTTACCTATGGAT  400

seq1  GCAGAACACCTTCCTCGATTTAGAGAAACTAGAGTCAAGAAGCAGTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACACCTTCCTCGATTTAGAGAAACTAGAGTCAAGAAGCAGTACAT  450

seq1  TCACCTGGACACTTGATTGGCATGTCTGTTTAGAATGAGGTCATGAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGGACACTTGATTGGCATGTCTGTTTAGAATGAGGTCATGAGTGG  500

seq1  TCTGTCCTCCTCCTGAATATTGCAGTGGAAGGCATTGTCAGCAACCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCCTCCTCCTGAATATTGCAGTGGAAGGCATTGTCAGCAACCACAA  550

seq1  GGACAGAATTTCTGAGCATAGCAAGTTTTCTAATATGTGTATGTGTTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAATTTCTGAGCATAGCAAGTTTTCTAATATGTGTATGTGTTGAG  600

seq1  GTTCGGTGTGTTGCTATGTTTTGTTATGCTAAATTCTCTACTCAAAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGGTGTGTTGCTATGTTTTGTTATGCTAAATTCTCTACTCAAAGGTC  650

seq1  TAGACTCTCTACTGACTTCTCACATTTACAAGGTTCTGTTGTGTAAACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACTCTCTACTGACTTCTCACATTTACAAGGTTCTGTTGTGTAAACCT  700

seq1  TGTTCCTTGATTTAAAACTACTGGATAAATCAAATTGGCTACAGCCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTGATTTAAAACTACTGGATAAATCAAATTGGCTACAGCCAATT  750

seq1  ACTGGAGGGATTTGAGGCAGGTGAGTTTTGAGTTAGCTGGTAGGAGGTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGGATTTGAGGCAGGTGAGTTTTGAGTTAGCTGGTAGGAGGTGG  800

seq1  AGAAGAGAGAGAAGGAAGAGACACCAGGACAAGGAGGAGGAATGGGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAGAGAAGGAAGAGACACCAGGACAAGGAGGAGGAATGGGAAAA  850

seq1  AAAGGACGAAGCTGCCCTGGAGCAGACGGACCATGAGCATGTGGCCAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACGAAGCTGCCCTGGAGCAGACGGACCATGAGCATGTGGCCAGGA  900

seq1  GAAACTGCAAC-TTCCACTGGGAAGGCAGCCAGGACAGCAGTTAGAAGAG  949
      ||||||||||| ||||||||| | ||||||||| ||||||||||||||||
seq2  GAAACTGCAACTTTCCACTGGAATGGCAGCCAGAACAGCAGTTAGAAGAG  950

seq1  TAGATTAAGGG-TTGCAGCTCAGTAATTGTCAAAGCCAAATGAAATAACC  998
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGATTAAGGGTTTGCAGCTCAGTAATTGTCAAAGCCAAATGAAATAACC  1000

seq1  CTAATCCGAATTGAGTTTATTTGTAAGGCGTAA-CCTTAAATTGGTTATA  1047
         |||||||||||| |||||||||| |||||| ||||||||||||||||
seq2  --TATCCGAATTGAG-TTATTTGTAA-GCGTAACCCTTAAATTGGTTATA  1046

seq1  TTACAC-ATGTAT  1059
      |||||| ||||||
seq2  TTACACAATGTAT  1059