BAC Information

Click to search

BAC

Clone NameB6Ng01-208L21
Chromosome13 (Build37)
Map Location 21,613,331 - 21,613,952
singlet/doubletsinglet
Overlap geneZfp192
Upstream geneElmo1, LOC100040226, LOC665381, LOC665386, Aoah, Olfr1370, Olfr1369-ps1, Olfr42, Olfr1368, Trim27, Gpx5, LOC625752, Gpx6, Olfr1367, Zfp96, LOC665454, Zkscan3, Pgbd1, 4930470G03Rik, Zfp187, 4921504I05Rik, OTTMUSG00000000421, AK157302, LOC100040340
Downstream geneOlfr1366, Olfr1365, Olfr1364, Olfr1362, Olfr1363-ps1, Olfr11, Olfr1361, Olfr1360, Olfr1359, Hist1h2bl, Hist1h2ai, Hist1h3h, Hist1h2aj, Hist1h2bm, Hist1h4j, Hist1h4k, Hist1h2ak, Hist1h2bn, LOC100041150, Hist1h1b, Hist1h3i, Hist1h2an, Hist1h2bp, LOC665596, Rp23-480b19.10, LOC100041230, Hist1h4m, Hist1h2ao, LOC665622, LOC665634, Zfp184, Gm24, Prss16, Hist1h2ah, Hist1h2bk, Hist1h4i, Hist1h2ag, Hist1h2bj, LOC665690, V1rh17, V1rh2, V1ri8, LOC632534, V1ri1, V1ri9, OTTMUSG00000000480, V1ri6, LOC665726, V1rh21, V1ri3, V1rh4, V1rh3, V1rh1, LOC665749, V1ri4, V1ri7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208L21.g
ACCGA027540
length907
definitionB6Ng01-208L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgagtttcttttaagattagaaaaaatttaaagcaaatttatga
ctacgtatgtcacgtgtgttgggtgtctgcaaaggccagaaggctctgca
tcccctagagttggagtactggtgcctatgaggtacttgatgtggatgct
gggaacaaagctcccgtcctccggaggagtagaaaccactcttaaccact
gagccatctccaccaaatcccgagtttaagctccactacgtcctccacaa
atgttataaagctactagagacacaacaagcaaagagaaaattcttaaat
cattataactatagctctccttacccagggagaacatgtttctgtatttc
tcgggcctgttatctctattcgaatccttctgtgatggatcaagaagcca
ctcctctcgaataagaaacacagccatgtcttcaatcctttccaaagtct
gaaacaaaacaagaccctcatttggggcctaaaaaggttccacagctcaa
aaccggtgttggaggtaactaccactttaggagaggtgaagaagcatgag
tgtgctatgctaaagggtgggaatagctgggaggaaaaggaaagtgcact
ggatttattgggggtgtggggactggcaggcttaggaccccaggacaagc
acggaatgctacaggatgagcagtggtgactctctaagttcactaggctg
aggtcctcttgcccttgaagaggtcagtttcttctccatccagcccctca
gctgtctgaatgagacctatgatggttgatactgattgccaaattgatag
aattccaactgtgtaggaaagaaacaattgggtgtggaggtccagcctca
gcatgaggagggtcccaggaaagcgggaatgggagtggcatgggttcaat
aaagatc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_21613331_21613952
seq2: B6Ng01-208L21.g_67_688

seq1  GAATTCTGAGTTTCTTTTAAGATTAGAAAAAATTTAAAGCAAATTTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAGTTTCTTTTAAGATTAGAAAAAATTTAAAGCAAATTTATGA  50

seq1  CTACGTATGTCACGTGTGTTGGGTGTCTGCAGAGGCCAGAAGGCTCTGCA  100
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTACGTATGTCACGTGTGTTGGGTGTCTGCAAAGGCCAGAAGGCTCTGCA  100

seq1  TCCCCTAGAGTTGGAGTACTGGTGCCTATGAGGTACTTGATGTGGATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTAGAGTTGGAGTACTGGTGCCTATGAGGTACTTGATGTGGATGCT  150

seq1  GGGAACAGAGCTCCCGTCCTCCGGAGGAGTAGAAACCACTCTTAACCACT  200
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACAAAGCTCCCGTCCTCCGGAGGAGTAGAAACCACTCTTAACCACT  200

seq1  GAGCCATCTCCACCAAATCCCGAGTTTAAGCTCCACTACGTCCTCCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGCCATCTCCACCAAATCCCGAGTTTAAGCTCCACTACGTCCTCCACAA  250

seq1  ATGTTATAAAGCTACTAGAGACACAACAAGCAAAGAGAAAATTCTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATAAAGCTACTAGAGACACAACAAGCAAAGAGAAAATTCTTAAAT  300

seq1  CATTATAACTATAGCTCTCCTTACCCAGGGAGAACATGTTTCTGTATTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAACTATAGCTCTCCTTACCCAGGGAGAACATGTTTCTGTATTTC  350

seq1  TCGGGCCTGTTATCTCTATTCAGATCCTTCTGTGATGGATCAAGAAGCCA  400
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TCGGGCCTGTTATCTCTATTCGAATCCTTCTGTGATGGATCAAGAAGCCA  400

seq1  CTCCTCTCGAATAAGAGACACAGCCATGTCTTCAATCCTTTCCAAAGTCT  450
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCCTCTCGAATAAGAAACACAGCCATGTCTTCAATCCTTTCCAAAGTCT  450

seq1  GAAACAAAACAAGACCCTCATTTGGGGCCTAGAAAGGTTCCACAGCTCAA  500
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAAACAAAACAAGACCCTCATTTGGGGCCTAAAAAGGTTCCACAGCTCAA  500

seq1  AACCAGTGTTGGAGGTAACTACAACTTTAGGAGAGGTGAAGAAGCAGGAG  550
      |||| ||||||||||||||||| ||||||||||||||||||||||| |||
seq2  AACCGGTGTTGGAGGTAACTACCACTTTAGGAGAGGTGAAGAAGCATGAG  550

seq1  TGTGCTATGCAAAAGGGTGGGAATAGCTGGGAGGAAAAGGAAAGTGCACT  600
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTATGCTAAAGGGTGGGAATAGCTGGGAGGAAAAGGAAAGTGCACT  600

seq1  GGATTTATTGGGGGTGTGGGGA  622
      ||||||||||||||||||||||
seq2  GGATTTATTGGGGGTGTGGGGA  622