BAC Information

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BAC

Clone NameB6Ng01-210J21
Chromosome13 (Build37)
Map Location 7,971,308 - 7,972,465
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-210J21.bB6Ng01-210J21.g
ACCGA028913GA028914
length1,1421,183
definitionB6Ng01-210J21.b B6Ng01-210J21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatcactttggttaaatccacagaacaacctattgatggtgatac
agtccaggagaaattctttctcttgttgataaatagaattcactaaaaat
cttcttcattctaagaattaattaattttttcatttttatccttattgaa
cctcagcagttcaatattgtaactatttttgtggggctatactctgaaga
gatagacttgaatatgtctccttcatcacgtgattgaaacaggatgtctt
tttcttatttcctgtagtcagaacggtatctaagtctcagagagatgaag
tcataatgaagggaattaggagcagacaataaatgtcttaagttcctgac
atagaaggaatataaagaataaactcatagaagatacatatttagtctga
taaggtacacacattttttttaatgtctaaaggctattttagttaaagtt
acctctaaagtgaatgttctgctaacaaatttcgttggtttgttttttgt
ttttttttttttttttttttggcatgtaattcaaggacacaatcatatac
agttggaaaagtgacaagagctagaggtggatgctgttgagggcataact
ctacaatcatttttctatgtgagattctatgcaggatagagaaccacaaa
tgtcaggtttgatcactaaactcaaggttactgagttgagaatacttgag
agattaaggtggcaataacccacctcctggaaactatttcccagtgattt
tgtgctaatgagaaacatgcagtctatggccagtatctcactagagacag
tagtcacagctcggaggcccaagatgagaagtgagcagcctcagttcctg
ctcccagagttccacctctcaaaccttcattaatggaactcctttgatga
aacttaactgctaaagccatatagttgaagtcaatgcatgaagtatagct
atattaccagggtcaatagacagcttaaacagttaatgtacaaatctgta
aagaggcactctagtgctagctgtgagtaaatgtgaaaaccagtctaata
gtctgagatatgtaaattcagagttgcacttaccaatatatttcatttag
aaatccacattacttggttctttttaactgctcattgtctgc
gaattctttgtttagctctgtaccctattttataatagggttaattgatt
ttctggagtccatcttcttgggttctttatatatattggatattagtccc
ctatctgatttaggatcggtaaagatactttcccaatctgttggtggcct
ttttgtattattgacagtatctaaaaaggacaatatttttaaagagacaa
cttttaaagtgtttgaatttgtaaggctgtggggcattataagtttgtaa
tatattttacattgtgatacattaatgtgtgatcctaggatgaacaagaa
aggaaaggctgtggcttaagagcaatgtgtttgtttgtcgagtctgtcaa
aagtcagttacactggctagatttatgccaactggacacaaatcaaagtc
atctgagaggaagaaacctcaatcgagaaaatgccttcataagcttgggc
tgtgggcaagcctgcagagcattttgttaattagtgattaaggggaaaag
gcccagcccattgtgcatggtgtcagtcctgggctggtggctctgggttt
tgcaggagagcagactgagcaaacctgtaagtagcacccctccatggtct
ctgcatcagctcttgagtctatgttcttgtccagcttgaattcctgtcct
ggcttctctcaatgaaagatgaaaatgtacaagtgtaagctcaataaacc
ttttcctccccaacctttttcatcatcctgtgttgtcaaagcagtagaag
ccctaactaagacaacgagaaacagaaagtgaacaagaatgaggcccagc
tctgaagcctcaagatccatgtcttgtcagaaactctcttcagcaagcct
cagtgtcctacagatcccatgatcttctccaacagcactgccacctggag
accaagagaagagttcaaacattttatttacctatgggggccacaataaa
tacccacttgtttcatggaggttcactatatcatacactaagtagaggat
atccataacaatctactcataaacatactgtactggcatgtctgaacata
aaaataatactctgaggctgtggaagagctgctttcttgccagctgacta
cttggagtctctggacccatggaagttcgatcaactcctgggaacgttcc
cctctaacccttccacacattggggggtaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7971308_7972465
seq2: B6Ng01-210J21.b_41_1182

seq1  GAATTCATCACTTTGGTTAAATCCACAGAACAACCTATTGATGGTGATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCACTTTGGTTAAATCCACAGAACAACCTATTGATGGTGATAC  50

seq1  AGTCCAGGAGAAATTCTTTCTCTTGTTGATAAATAGAATTCACTAAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCAGGAGAAATTCTTTCTCTTGTTGATAAATAGAATTCACTAAAAAT  100

seq1  CTTCTTCATTCTAAGAATTAATTAATTTTTTCATTTTTATCCTTATTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCATTCTAAGAATTAATTAATTTTTTCATTTTTATCCTTATTGAA  150

seq1  CCTCAGCAGTTCAATATTGTAACTATTTTTGTGGGGCTATACTCTGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCAGTTCAATATTGTAACTATTTTTGTGGGGCTATACTCTGAAGA  200

seq1  GATAGACTTGAATATGTCTCCTTCATCACGTGATTGAAACAGGATGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGACTTGAATATGTCTCCTTCATCACGTGATTGAAACAGGATGTCTT  250

seq1  TTTCTTATTTCCTGTAGTCAGAACGGTATCTAAGTCTCAGAGAGATGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTATTTCCTGTAGTCAGAACGGTATCTAAGTCTCAGAGAGATGAAG  300

seq1  TCATAATGAAGGGAATTAGGAGCAGACAATAAATGTCTTAAGTTCCTGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAATGAAGGGAATTAGGAGCAGACAATAAATGTCTTAAGTTCCTGAC  350

seq1  ATAGAAGGAATATAAAGAATAAACTCATAGAAGATACATATTTAGTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGGAATATAAAGAATAAACTCATAGAAGATACATATTTAGTCTGA  400

seq1  TAAGGTACACACATTTTTTTTAATGTCTAAAGGCTATTTTAGTTAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTACACACATTTTTTTTAATGTCTAAAGGCTATTTTAGTTAAAGTT  450

seq1  ACCTCTAAAGTGAATGTTCTGCTAACAAATTTCGTTGGTTTGTTTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTAAAGTGAATGTTCTGCTAACAAATTTCGTTGGTTTGTTTTTTGT  500

seq1  TTTTTTTTTTTTTTTTTTTTGGCATGTAATTCAAGGACACAATCATATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTTTTGGCATGTAATTCAAGGACACAATCATATAC  550

seq1  AGTTGGAAAAGTGACAAGAGCTAGAGGTGGATGCTGTTGAGGGCATAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAAAAGTGACAAGAGCTAGAGGTGGATGCTGTTGAGGGCATAACT  600

seq1  CTACAATCATTTTTCTATGTGAGATTCTATGCAGGATAGAGAACCACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAATCATTTTTCTATGTGAGATTCTATGCAGGATAGAGAACCACAAA  650

seq1  TGTCAGGTTTGATCACTAAACTCAAGGTTACTGAGTTGAGAATACTTGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGTTTGATCACTAAACTCAAGGTTACTGAGTTGAGAATACTTGAG  700

seq1  AGATTAAGGTGGCAATAACCCACCTCCTGGAAACTATTTCCCAGTGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAGGTGGCAATAACCCACCTCCTGGAAACTATTTCCCAGTGATTT  750

seq1  TGTGCTAATGAGAAACATGCAGTCTATGGCCAGTATCTCACTAGAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAATGAGAAACATGCAGTCTATGGCCAGTATCTCACTAGAGACAG  800

seq1  TAGTCACAGCTCGGAGGCCCAAGATGAGAAGTGAGCAGCCTCAGTTCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACAGCTCGGAGGCCCAAGATGAGAAGTGAGCAGCCTCAGTTCCTG  850

seq1  CTCCCAGAGTTCCACCTCTCAAAACCTTCATTAATGGAACTCCTTTGATG  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTCCCAGAGTTCCACCTCTC-AAACCTTCATTAATGGAACTCCTTTGATG  899

seq1  AAACTTAACTGCTAAAGCCATATAGTTGAAGTCAATGCATGAAGTATAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAACTGCTAAAGCCATATAGTTGAAGTCAATGCATGAAGTATAGC  949

seq1  TATATTACCA-GGTCAATAGACAGCTTAAACAGTTTAATGTACAAATCTG  999
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  TATATTACCAGGGTCAATAGACAGCTTAAACAG-TTAATGTACAAATCTG  998

seq1  TAAAGAGGCCACTCTAGTTGCTAGCTGTGAGTAAAATGTGAAAACCAGTC  1049
      |||||||| |||||||| |||||||||||||| |||||||||||||||||
seq2  TAAAGAGG-CACTCTAG-TGCTAGCTGTGAGT-AAATGTGAAAACCAGTC  1045

seq1  T-ATAGTCTGAAGATTATGTAAATTCAGAGTTGCACCTACCATTATATTT  1098
      | |||||||| ||| ||||||||||||||||||||| ||||| |||||||
seq2  TAATAGTCTG-AGA-TATGTAAATTCAGAGTTGCACTTACCAATATATTT  1093

seq1  AATTTTAGAAATTCCACATTAACCTGGGTTTTCTTTTTTTAAACTGCTTC  1148
       | |||||||| |||||||||  || ||  ||||||||   |||||| ||
seq2  CA-TTTAGAAA-TCCACATTA--CTTGG--TTCTTTTT---AACTGC-TC  1133

seq1  ATATGTCTGC  1158
      || |||||||
seq2  AT-TGTCTGC  1142