BAC Information

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BAC

Clone NameB6Ng01-211F14
Chromosome13 (Build37)
Map Location 119,299,621 - 119,448,449
singlet/doubletdoublet
Overlap geneLOC668309
Upstream geneHcn1, LOC100041695, LOC674926, Mrps30
Downstream geneLOC100041278, Fgf10, LOC100041298, LOC100041757, Nnt, Paip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-211F14.bB6Ng01-211F14.g
ACCGA029439GA029440
length1,000502
definitionB6Ng01-211F14.b B6Ng01-211F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,447,516 - 119,448,449)(119,299,621 - 119,300,128)
sequence
gaattcacttctctattcatctccttacatctgtttctactaacgtgcta
ctgctgcctgtggtcacattatgtaaaaacctccagttttacagatagca
gcatcccaggaaagaaaggttcagaatcttgctccaactcaccaaagttc
tagcccaggagattttgcaaagaattaactaaaccatccataccatagta
taaagttcaaaattttgactctgttaacataatggctacaacaacaacaa
caacatttatttatttatttacttatttatttttgtatcctaaagaaaat
cttgagatatgcaaaatataatcagaacctaaattttaagagatttaaaa
gtgtttgattgttgttcatattttaaaaataatttgtttaaacattttta
catatacttattatctacttactctaatgaatacatgcgtatatgcactt
gccatgcacatgtagaaaagtcaggagaaaacttgcaagagtcagttctt
tccttctgccatgtgggtcccaaagttgagttcgggctagacacgtcagc
agatacattcaaccactgagagttgcaggccctggttgttggttttaaac
tgtgtgacataaactttctcccctgtgaagagttggtaattgggtctttg
ggtcttctggaacaaactaacaatggactggctaggctaacaggagatga
gatactagcgttcagaatctcaagtactcgggtgacacagggtactcatt
aacccactgtgatagcaaagtgtgtatagccttcttcataagcaaaaaaa
aaaaaaaaaaaaaggcaaggcaggaggcaattttagtaaatgattttttt
tagcagagacgaatgagtccaaagagtagactgtgagtagggacaaaggt
tccttgaggtttggagtgtggtgtttcactttcaagcttcttcttcttgt
gggaactattactctgcgatgagattatagaagaggactctcatgaccac

ctttaccgcgggcccttcatgataactgcaccagtttagagtgatatgta
cgttttctggaatgtcagcagtatgattgctgacatggtattcattctcg
aagtagatacaacagagagactttaagggttgttttgttgttgttgcttt
tgctgttatgtttgttggtttatttaagctacaaattcagtattgtctaa
aaaacttgtgcaaatttctcaattacccagattattacttttaaatacat
ttttattaaatgtttgagaatttcattcctgtgtattttcattatattca
cccatacccctccccaagggcctcctagatttcacaacatccctccaaat
tttcttttctcatatttaaatgttttcattttgtaaaacaatttcataca
ttgtactatatttccattatttcctcctccaaatctatatgcatgtgtgt
gtgcatgcatgcctcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_119447516_119448449
seq2: B6Ng01-211F14.b_48_979 (reverse)

seq1  AAAGTGAAACACCACACTCCAAACCTCAAGGAACCTTTGTCCCTACTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAACACCACACTCCAAACCTCAAGGAACCTTTGTCCCTACTCAC  50

seq1  AGTCTACTCTTTGGACTCATTCGTCTCTGCT-AAAAAAATCATTTACTAA  99
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTCTACTCTTTGGACTCATTCGTCTCTGCTAAAAAAAATCATTTACTAA  100

seq1  AATTGCCTCCTGCCTTGCCTTTTTTTTTTTTTTTTTTTTTTTGCTTATGA  149
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  AATTGCCTCCTGCCTTGCC---TTTTTTTTTTTTTTTTTTTTGCTTATGA  147

seq1  AGAAGGCTATACACACTTTGCTATCACAGTGGGTTAATGAGTACCCTGTG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTATACACACTTTGCTATCACAGTGGGTTAATGAGTACCCTGTG  197

seq1  TCACCCGAGTACTTGAGATTCTGAACGCTAGTATCTCATCTCCTGTTAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCGAGTACTTGAGATTCTGAACGCTAGTATCTCATCTCCTGTTAGC  247

seq1  CTAGCCAGTCCATTGTTAGTTTGTTCCAGAAGACCCAAAGACCCAATTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCAGTCCATTGTTAGTTTGTTCCAGAAGACCCAAAGACCCAATTAC  297

seq1  CAACTCTTCACAGGGGAGAAAGTTTATGTCACACAGTTTAAAACCAACAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTTCACAGGGGAGAAAGTTTATGTCACACAGTTTAAAACCAACAA  347

seq1  CCAGGGCCTGCAACTCTCAGTGGTTGAATGTATCTGCTGACGTGTCTAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCTGCAACTCTCAGTGGTTGAATGTATCTGCTGACGTGTCTAGC  397

seq1  CCGAACTCAACTTTGGGACCCACATGGCAGAAGGAAAGAACTGACTCTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAACTCAACTTTGGGACCCACATGGCAGAAGGAAAGAACTGACTCTTG  447

seq1  CAAGTTTTCTCCTGACTTTTCTACATGTGCATGGCAAGTGCATATACGCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTTCTCCTGACTTTTCTACATGTGCATGGCAAGTGCATATACGCA  497

seq1  TGTATTCATTAGAGTAAGTAGATAATAAGTATATGTAAAAATGTTTAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTCATTAGAGTAAGTAGATAATAAGTATATGTAAAAATGTTTAAAC  547

seq1  AAATTATTTTTAAAATATGAACAACAATCAAACACTTTTAAATCTCTTAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATTTTTAAAATATGAACAACAATCAAACACTTTTAAATCTCTTAA  597

seq1  AATTTAGGTTCTGATTATATTTTGCATATCTCAAGATTTTCTTTAGGATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGGTTCTGATTATATTTTGCATATCTCAAGATTTTCTTTAGGATA  647

seq1  CAAAAATAAATAAGTAAATAAATAAATAAATGTTGTTGTTGTTGTTGTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAAATAAGTAAATAAATAAATAAATGTTGTTGTTGTTGTTGTAG  697

seq1  CCATTATGTTAACAGAGTCAAAATTTTGAACTTTATACTATGGTATGGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTATGTTAACAGAGTCAAAATTTTGAACTTTATACTATGGTATGGAT  747

seq1  GGTTTAGTTAATTCTTTGCAAAATCTCCTGGGCTAGAACTTTGGTGAGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTTAATTCTTTGCAAAATCTCCTGGGCTAGAACTTTGGTGAGTT  797

seq1  GGAGCAAGATTCTGAACCTTTCTTTCCTGGGATGCTGCTATCTGTAAAAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAAGATTCTGAACCTTTCTTTCCTGGGATGCTGCTATCTGTAAAAC  847

seq1  TGGAGGTTTTTACATAATGTGACCACAGGCAGCAGTAGCACGTTAGTAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTTTTTACATAATGTGACCACAGGCAGCAGTAGCACGTTAGTAGA  897

seq1  AACAGATGTAAGGAGATGAATAGAGAAGTGAATTC  934
      |||||||||||||||||||||||||||||||||||
seq2  AACAGATGTAAGGAGATGAATAGAGAAGTGAATTC  932

seq1: chr13_119299621_119300128
seq2: B6Ng01-211F14.g_66_573

seq1  GAATTCCTTTACCGCGGGCCCTTCATGATAACTGCACCAGTTTAGAGTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTACCGCGGGCCCTTCATGATAACTGCACCAGTTTAGAGTGA  50

seq1  TATGTACGTTTTCTGGAATGTCAGCAGTATGATTGCTGACATGGTATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACGTTTTCTGGAATGTCAGCAGTATGATTGCTGACATGGTATTCA  100

seq1  TTCTCGAAGTAGATACAACAGAGAGACTTTAAGGGTTGTTTTGTTGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGAAGTAGATACAACAGAGAGACTTTAAGGGTTGTTTTGTTGTTGT  150

seq1  TGCTTTTGCTGTTATGTTTGTTGGTTTATTTAAGCTACAAATTCAGTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTGCTGTTATGTTTGTTGGTTTATTTAAGCTACAAATTCAGTATT  200

seq1  GTCTAAAAAACTTGTGCAAATTTCTCAATTACCCAGATTATTACTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAAAAACTTGTGCAAATTTCTCAATTACCCAGATTATTACTTTTAA  250

seq1  ATACATTTTTATTAAATGTTTGAGAATTTCATTCCTGTGTATTTTCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTTTATTAAATGTTTGAGAATTTCATTCCTGTGTATTTTCATTA  300

seq1  TATTCACCCATACCCCTCCCCAAGGGCCTCCTAGATTTCACAACATCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACCCATACCCCTCCCCAAGGGCCTCCTAGATTTCACAACATCCCT  350

seq1  CCAAATTTTCTTTTCTCATATTTAAATGTTTTCATTTTGTAAAACAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTTCTTTTCTCATATTTAAATGTTTTCATTTTGTAAAACAATTT  400

seq1  CATACATTGTACTATATTTCCATTATTTCCTCCTCCAAATCTATATGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATTGTACTATATTTCCATTATTTCCTCCTCCAAATCTATATGCAT  450

seq1  GTGTGTGTGCATGCATGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGCATGCATGCCTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  500

seq1  TGTGTGTG  508
      ||||||||
seq2  TGTGTGTG  508