MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-212B16
Chromosome	13 (Build37)
Map Location	4,168,111 - 4,169,303
singlet/doublet	singlet
Overlap gene	LOC100039262
Upstream gene	Speer6-ps1, LOC674228, LOC667411, LOC100039182, 2810429I04Rik, Gdi2, Asb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18
Downstream gene	Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Link	Open Mouse BAC browser

Click to get alignment info.

name	Speer6-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73266 MGI:1920516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	LOC674228 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1299 ESTs, 8 Proteins pseudo : _no_value

name	LOC667411 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667411
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 10 Proteins pseudo : _no_value

name	LOC100039182 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	2810429I04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76937 MGI:1924187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Gdi2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14569 MGI:99845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:142688 MGI:2145525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Calml3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70405 MGI:1917655
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calm4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80796 MGI:1931464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Calm5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:494124 MGI:3511177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039279 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Net1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56349 MGI:1927138
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Tubal3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238463 MGI:3588215
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ucn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83428 MGI:1932970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105387 MGI:2145458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:105349 MGI:2145420
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039262 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039262
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	Akr1c13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27384 MGI:1351662
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432720 MGI:2653678
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622402 MGI:1351661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83702 MGI:1933427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116852 MGI:2151104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1c21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77337 MGI:1924587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Akr1e1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56043 MGI:1914758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG432721 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432721 MGI:3648624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 820 ESTs, 4 Proteins

name	EG432723 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:432723 MGI:3644242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039182 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263806 GeneID:100039182
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to cyclin-dependent kinase 6 transcript_id : XM_001472410.1

name	2810429I04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263808 GeneID:76937 MGI:1924187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : RIKEN cDNA 2810429I04 gene transcript_id : XM_001472430.1

name	Gdi2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089272 GeneID:14569 MGI:99845
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanosine diphosphate (GDP) dissociation inhibitor 2 transcript_id : NM_008112.4

name	Asb13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129855 GeneID:142688 MGI:2145525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 13 transcript_id : NM_178283.3

name	Asb13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131078 GeneID:142688 MGI:2145525
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 13 transcript_id : NM_080857.2

name	Calml3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347500 GeneID:70405 MGI:1917655
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin-like 3 transcript_id : NM_027416.2

name	Calm4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351881 GeneID:80796 MGI:1931464
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin 4 transcript_id : NM_020036.3

name	Calm5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56785417 GeneID:494124 MGI:3511177
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calmodulin 5 transcript_id : NM_001008706.1

name	LOC100039279 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263810 GeneID:100039279
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100039279 transcript_id : XM_001472575.1

name	Net1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145476 GeneID:56349 MGI:1927138
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroepithelial cell transforming gene 1 transcript_id : NM_019671.2

name	Net1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114145470 GeneID:56349 MGI:1927138
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuroepithelial cell transforming gene 1 transcript_id : NM_001047159.1

name	Tubal3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385159 GeneID:238463 MGI:3588215
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin, alpha-like 3 transcript_id : NM_001033879.2

name	Ucn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366005 GeneID:83428 MGI:1932970
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : urocortin 3 transcript_id : NM_031250.4

name	Akr1c14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19527293 GeneID:105387 MGI:2145458
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C14 transcript_id : NM_134072.1

name	Akr1c18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802036 GeneID:105349 MGI:2145420
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C18 transcript_id : NM_134066.2

name	Akr1c13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7304878 GeneID:27384 MGI:1351662
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C13 transcript_id : NM_013778.1

name	Akr1c19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371628 GeneID:432720 MGI:2653678
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C19 transcript_id : NM_001013785.2

name	Akr1c12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85719329 GeneID:622402 MGI:1351661
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C12 transcript_id : NM_013777.2

name	Akr1c6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368094 GeneID:83702 MGI:1933427
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C6 transcript_id : NM_030611.3

name	Akr1c20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16905110 GeneID:116852 MGI:2151104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C20 transcript_id : NM_054080.1

name	Akr1c21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090769 GeneID:77337 MGI:1924587
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member C21 transcript_id : NM_029901.2

name	Akr1e1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93277107 GeneID:56043 MGI:1914758
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldo-keto reductase family 1, member E1 transcript_id : NM_018859.2

name	EG432721 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263814 GeneID:432721 MGI:3648624
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 820 ESTs, 4 Proteins product : predicted gene, EG432721 transcript_id : XM_484210.5

name	EG432723 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51921334 GeneID:432723 MGI:3644242
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG432723 transcript_id : NM_001004168.1

name	LOC100039182 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263807 GeneID:100039182
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472460.1

name	2810429I04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263809 GeneID:76937 MGI:1924187
definition	codon_start : 1 product : hypothetical protein LOC76937 protein_id : XP_001472480.1

name	Gdi2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089273 GeneID:14569 MGI:99845
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IPI] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005097 - Rab GTPase activator activity [Evidence IPI] GO_process : GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IPI] codon_start : 1 note : RAB GDP dissociation inhibitor beta-2; guanosine diphosphate (GDP) dissociation inhibitor 3; GDI beta product : guanosine diphosphate (GDP) dissociation inhibitor 2 protein_id : NP_032138.3

name	Asb13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18252802 GeneID:142688 MGI:2145525
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : ankyrin repeat domain-containing SOCS box protein 13 product : ankyrin repeat and SOCS box-containing protein 13 protein_id : NP_543133.1

name	Asb13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30231208 GeneID:142688 MGI:2145525
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : ankyrin repeat domain-containing SOCS box protein 13 product : ankyrin repeat and SOCS box-containing protein 13 protein_id : NP_840068.1

name	Calml3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386230 CCDS:CCDS26214.1 GeneID:70405 MGI:1917655
definition	codon_start : 1 product : calmodulin-like 3 protein_id : NP_081692.1

name	Calm5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56785418 GeneID:494124 MGI:3511177
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : calmodulin 5 protein_id : NP_001008706.1

name	Calm4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:36796745 CCDS:CCDS26215.1 GeneID:80796 MGI:1931464
definition	GO_component : GO:0005626 - insoluble fraction [Evidence IDA]; GO:0005625 - soluble fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IDA] codon_start : 1 note : calmodulin-related factor; calcium binding gene, DD112 product : calmodulin 4 protein_id : NP_064420.2

name	LOC100039279 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263811 GeneID:100039279
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472625.1

name	Net1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145477 CCDS:CCDS26216.1 GeneID:56349 MGI:1927138
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; Net1 homolog; guanine nucleotide regulatory protein (oncogene) product : neuroepithelial cell transforming gene 1 isoform 1 protein_id : NP_062645.2

name	Net1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114145471 GeneID:56349 MGI:1927138
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005089 - Rho guanyl-nucleotide exchange factor activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0035023 - regulation of Rho protein signal transduction [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; Net1 homolog; guanine nucleotide regulatory protein (oncogene) product : neuroepithelial cell transforming gene 1 isoform 2 protein_id : NP_001040624.1

name	Tubal3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84794631 GeneID:238463 MGI:3588215
definition	GO_component : GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0003924 - GTPase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0051258 - protein polymerization [Evidence IEA] codon_start : 1 exception : mismatches in translation product : tubulin, alpha-like 3 protein_id : NP_001029051.1

name	Ucn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21492632 CCDS:CCDS26217.1 GeneID:83428 MGI:1932970
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0005179 - hormone activity [Evidence IEA]; GO:0005184 - neuropeptide hormone activity [Evidence TAS]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007189 - G-protein signaling, adenylate cyclase activating pathway [Evidence IDA]; GO:0007218 - neuropeptide signaling pathway [Evidence TAS] codon_start : 1 note : Urocortin II; Urocortin III product : urocortin 3 protein_id : NP_112540.2

name	Akr1c14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527294 CCDS:CCDS26218.1 GeneID:105387 MGI:2145458
definition	GO_function : GO:0047042 - 3-alpha-hydroxysteroid dehydrogenase (B-specific) activity [Evidence IEA] codon_start : 1 note : 3-alpha-hydroxysteroid dehydrogenase type 1 product : aldo-keto reductase family 1, member C14 protein_id : NP_598833.1

name	Akr1c18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527284 CCDS:CCDS26219.1 GeneID:105349 MGI:2145420
definition	EC_number : 1.1.1.149 GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0047006 - 20-alpha-hydroxysteroid dehydrogenase activity [Evidence IDA] [Evidence IMP] [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0007567 - parturition [Evidence IMP]; GO:0006709 - progesterone catabolism [Evidence IMP] [Evidence IDA]; GO:0042448 - progesterone metabolism [Evidence ISS] codon_start : 1 note : 20-alpha-hydroxysteroid dehydrogenase; 20alpha-HSD product : aldo-keto reductase family 1, member C18 protein_id : NP_598827.1

name	Akr1c13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304879 CCDS:CCDS26220.1 GeneID:27384 MGI:1351662
definition	GO_function : GO:0004033 - aldo-keto reductase activity [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006805 - xenobiotic metabolism [Evidence TAS] codon_start : 1 exception : mismatches in translation note : aldo-keto reductase AKR1C13 product : aldo-keto reductase family 1, member C13 protein_id : NP_038806.1

name	Akr1c19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000660 CCDS:CCDS26221.1 GeneID:432720 MGI:2653678
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation product : aldo-keto reductase family 1, member C19 protein_id : NP_001013807.1

name	Akr1c12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85719330 CCDS:CCDS26222.1 GeneID:622402 MGI:1351661
definition	GO_function : GO:0004033 - aldo-keto reductase activity [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006805 - xenobiotic metabolism [Evidence TAS] codon_start : 1 note : aldo-keto reductase a product : aldo-keto reductase family 1, member C12 protein_id : NP_038805.2

name	Akr1c6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13487925 CCDS:CCDS26223.1 GeneID:83702 MGI:1933427
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004303 - estradiol 17-beta-dehydrogenase activity [Evidence IDA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0008202 - steroid metabolism [Evidence IDA] codon_start : 1 note : hydroxysteroid 17-beta dehydrogenase 5; 17HSD type 5; aldo-keto reductase family 1, member C1 (aldehyde reductase); estradiol 17-beta-dehydrogenase (A-specific) product : aldo-keto reductase family 1, member C6 protein_id : NP_085114.1

name	Akr1c20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16905111 CCDS:CCDS26224.1 GeneID:116852 MGI:2151104
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004033 - aldo-keto reductase activity [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006694 - steroid biosynthesis [Evidence ISS] codon_start : 1 product : aldo-keto reductase family 1, member C20 protein_id : NP_473421.1

name	Akr1c21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090770 CCDS:CCDS26225.1 GeneID:77337 MGI:1924587
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0004033 - aldo-keto reductase activity [Evidence ISS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006694 - steroid biosynthesis [Evidence ISS] codon_start : 1 note : 3(17)alpha-hydroxysteroid dehydrogenase product : aldo-keto reductase family 1, member C21 protein_id : NP_084177.2

name	Akr1e1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:93277108 CCDS:CCDS26226.1 GeneID:56043 MGI:1914758
definition	GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 product : aldo-keto reductase family 1, member E1 protein_id : NP_061347.2

name	EG432721 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51767511 GeneID:432721 MGI:3648624
definition	codon_start : 1 product : similar to ribosomal protein protein_id : XP_484210.1

name	EG432723 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921335 GeneID:432723 MGI:3644242
definition	codon_start : 1 product : hypothetical protein LOC432723 protein_id : NP_001004168.1

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 7 pseudo : _no_value

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 6 pseudo : _no_value

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 5 pseudo : _no_value

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 4 pseudo : _no_value

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 3 pseudo : _no_value

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 2 pseudo : _no_value

name	LOC100039262 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039262
definition	number : 1 pseudo : _no_value

name	Speer6-ps1 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:142364245 GeneID:73266 MGI:1920516
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1 pseudo : _no_value transcript_id : NR_001581.2

name	LOC674228 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263805 GeneID:674228
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 mRNAs, 1299 ESTs, 8 Proteins product : similar to ribosomal protein S4, X-linked pseudo : _no_value transcript_id : XR_030696.1

name	LOC667411 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149263804 GeneID:667411
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 16 ESTs, 10 Proteins product : similar to ribonucleotide reductase M2 B (TP53 inducible) pseudo : _no_value transcript_id : XR_030665.1

clone name	MSMg01-133H12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-535E13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-185N18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-144M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-367K14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-117B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122A07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-405H22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-133L22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146E03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-399E09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-298B08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-235O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139K07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-483B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344J12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189H21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062J06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-511H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125M24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-117A13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-102D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137E20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-517P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-062D24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-392E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172N12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-494M21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-532L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108F09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-164M18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-379B21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-401M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-136L12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-213J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401G12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444J13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117N17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-275B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019H21
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-212B16.b	B6Ng01-212B16.g
ACC	GA029987	GA029988
length	1,221	1,199
definition	B6Ng01-212B16.b	B6Ng01-212B16.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcaacctgaactcaaactgctctaatagaagctaaaaagctcct ccaggaactggtccactgatttggcatcctcctagcagtggggtcaggcc atgatctggctttcataggtaaaatctctcaattaacagctagagcttta aaacttcatcttacatatagacctcagagatgacaaaaaaatgttaaaat aaactctaacaaaactctcattagagtctagcaaagatagacgtctattg ccttgcttttattcagtctgctgcaccccatatacagatggggttaaccc catctcccaaagagattatgtctgaaggacttcccctattgtttcacagg ctcagagaccaacagttttcagaactttctaaccatttctttctcaagtc actataagcacttcagtcctccataaaggctatttgtaggaatatccaag agatgcagccaacctctgagtctaccaccagtttccttttgttccagtct gatgatactctctgggtcaagcagacaactgaggaggtgttttgggaaat attaaaaatgaaccagcacattcctgtgcttgtgctggcaactttctgtc caggaggcctgatgggctatgggctggtgggcaatggccaacctgttttt atctcatggagactggcccagagctcctgaaacatctccacccaattcac tatcgcaccagccccctgcttcaaaacccccatgacctttgtggttcaca tcaggcaaacccatgctttgccaccggaccttttttcttgaacccagaag agccacagtgtaaaggaaaacacaacacaaacttagttcagaaacagcag taactcaattgctaaaatcctaatcttgtaagccttattaaatctaaatc ctcttgtggagaatcctgttgggagctgacactgaaacagagagacactt gtagctacatcttgtcctcatgctagcctcattcaaaaggcccctaactc tctgctcctcttctctcctctgtccacctggaagtctctctactgcctac agatagtctcctttattcatagggactgttcacaagagtcacctgggtac atgactcactcctgctcacaactccttccaggagagcgaataaatcaatc aacgacctaggatcatcccacatgagaaatagtacttctttccacacacc atatggacacgtgtgatttag	gaattcagcacatgaccaattcatgttatacctgttactgtagggttttg tctgaggtaacttggaggaaccagtccaaagaagatagaaattccaagta caaataggttccaagaagaattcaagtcaatgaacttccagttagagagg ctgtcttttatcatcccaaaaagtgagcagaaaggggctctgagcatgat ctggtagggtcgtgcagagggtgatgaacttgccaatcatgcaccagtcc agcatgagtgctgcaccatactgtgtctctcagcagttgggaaccttagc aatttccaaaactccaacactggaggaggtagagtcattcctagcaccaa aaatactatggcgagtacaggaaagatcctttaaaaaataccactgctta ttacatggacaggaggttgtgagtgttgggaacaagcaaacaacaacaag aacaacttgttctaagtactgccattttgttttcagactccatttattca taggggtaaactaagttcaaggttctaggtcctaggggaacttctcaata ccttcttctctgaagaagctgctgttgtaaggacccagctgtccaagtcc agccttcttagggtcatcttgtaaaaaaaaccaattgtctaagtccagac acctcaaggacaacttctctatcttgctggcagggttaaactgattttat gttcccatgcccaggatttgtggcaaaatgtaacaataacttggaacaga tgtttttgatttgcaaggttaaatatttgtgatagtctggctctttgttg cagttcatctctcgagtctgttcagcactctgatcgatcagtggtgtctt gattacaatatttttttgtcatccgcattgaccttgtttttgagttatgt tggttttaagtgtatctcataactggtgggggggcacgcaagctctggca caggcgtagtagtctaccaacagacttcagggtacaggtttccagtggca cggagaatattcttatgacagcacaggaagcagagaaacctgtacatatt cacaccacttgcacagtctggcagaaactcacagtctgtattgtaatcct tccaatgcctctgtctaaacttcttcaggcagaatcaccttggtcgctgc gaatctggacttcaagtcttttttgcaggctttttcccctctcggagag
quality values	Open. Hide. 46 17 35 32 62 62 62 31 26 49 62 62 62 62 38 62 62 62 47 30 62 62 62 62 62 62 62 62 59 62 62 51 46 39 38 33 28 33 56 56 59 56 43 38 54 59 62 54 49 62 62 59 59 62 62 59 62 62 62 62 62 62 62 59 59 59 62 59 59 62 62 62 62 59 62 62 62 62 49 54 62 54 59 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 56 62 62 62 62 62 62 62 54 62 62 62 62 56 62 43 56 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 58 58 58 58 58 58 58 58 58 42 58 58 58 58 58 58 58 58 45 58 58 58 58 58 58 52 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 52 52 54 54 58 52 58 58 58 58 58 54 54 50 54 58 54 35 58 52 47 50 58 58 52 58 58 48 51 54 53 54 58 41 58 51 58 58 58 40 58 58 58 43 51 54 49 58 51 37 45 39 58 54 58 52 58 31 58 58 58 58 49 49 50 58 50 53 51 58 58 49 41 49 31 49 58 46 32 44 40 50 32 46 36 51 51 40 50 49 58 58 51 40 50 38 51 41 46 41 46 29 54 51 52 39 49 50 58 53 50 37 41 50 43 51 49 40 52 40 50 50 41 50 43 43 43 41 39 50 50 54 41 39 21 54 51 52 39 47 44 49 50 37 42 53 54 30 39 50 50 41 40 45 54 49 39 47 38 37 49 37 53 39 38 11 16 19 33 54 35 31 53 52 37 40 53 45 40 54 51 45 33 28 14 9 42 28 27 30 23 37 39 54 54 54 54 24 35 33 33 42 32 53 37 40 32 28 35 53 39 24 40 13 32 47 24 40 29 32 32 53 35 31 49 36 24 36 42 53 53 40 33 29 34 25 25 20 32 31 21 40 30 35 43 30 33 21 34 8 22 33 24 51 46 12 21 29 31 38 34 28 25 25 28 24 30 33 29 27 37 41 37 32 33 20 46 46 26 31 31 31 25 25 36 26 31 26 30 40 20 31 31 20 20 33 21 37 38 31 31 31 46 25 31 31 31 32 47 24 35 29 30 29 36 26 25 31 17 28 30 29 16 35 38 22 23 33 29 41 14 41 13 48 15 35 21 32 30 23 28 13 23 24 27 31 37 48 30 26 25 28 32 7 21 29 37 21 16 26 31 29 27 20 31 22 35 32 22 36 24 29 21 33 12 24 11 15 21 13 17 21 24 20 25 27 25 22 14 5 5 24 18 17 29 32 33 48 48 25 19 20 6 33 20 24 17 16 23 27 23 16 12 17 16 16 23 32 16 18 30 22 11 14 12 9 8 43 7 26 18 20 21 20 7 11 17 31 5 9 16 16 12 4 24 11 19 16 7 7 21 28 9 19 6 25 10 18 10 13 16 18 7 11 28 20 24 28 21 22 18 16 14 15 34 8 16 11 23 23 11 31 23 20 47 21 14 9 15 11 3 3 6 16 12 7 16 9 11 7 12 8 6 4 13 6 10 17 24 9 6 8 5 10 7 11 5 10 12 15 6 7 7 17 15 7 4 4 4 9 6 12 9 23 12 6 8 8 7 9 17 6 4 7 12 4 9 5 6 3 11 13 3 2 16 14 15 7 25 17 12 5 5 6 6 2 1 5 7 16 7 16 17 8 4 3 6 14 13 16 8 19 5 3 2 4 3 3 3 19 10 4 6 2 3 3 6 13 4 7 13 5 9 5 6 4 5 14 7 5 12 11 3 9 4 4 5 6 9 4 7 5 7 6 15 7 10 7 5 10 5 6 15	Open. Hide. 62 47 36 36 62 47 37 54 62 62 56 42 50 30 29 50 44 27 38 46 62 44 46 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 54 62 62 62 62 54 62 62 62 62 62 62 54 62 59 59 62 59 62 62 62 59 59 59 62 62 62 59 62 59 62 62 62 59 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 42 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 59 62 62 62 62 54 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 59 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 56 62 54 54 62 62 62 62 62 49 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 43 46 62 62 62 62 62 62 62 62 62 62 56 62 62 62 56 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 52 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 58 58 54 54 58 58 58 54 54 54 54 54 58 58 54 58 58 58 58 54 58 58 54 58 52 43 58 58 58 58 54 58 52 54 54 45 43 54 54 54 58 58 52 54 54 58 58 58 58 46 58 58 52 52 52 52 34 52 52 58 58 58 52 52 58 52 58 45 37 47 44 41 52 54 58 54 49 48 38 40 46 50 45 39 45 38 47 44 43 48 45 58 54 53 54 51 58 54 50 51 51 54 51 58 54 58 42 49 58 58 58 58 58 50 51 50 47 40 49 49 58 58 52 53 53 52 49 38 53 49 48 39 52 51 41 41 41 48 54 50 38 37 50 51 28 29 46 50 50 51 52 58 58 53 50 50 53 53 53 53 54 35 49 52 58 29 41 29 58 17 22 40 37 58 51 50 51 49 47 40 58 58 50 38 26 46 50 41 52 51 49 27 53 53 52 44 27 36 27 54 25 18 54 54 53 40 50 44 32 52 54 54 46 49 31 17 41 52 49 27 50 45 40 54 44 44 44 50 29 47 50 40 44 37 41 32 52 52 54 54 54 33 30 39 25 54 54 45 36 33 32 41 54 29 45 37 54 44 33 34 37 54 36 46 32 52 53 35 52 34 34 40 38 54 45 33 32 37 32 51 23 42 37 25 32 32 36 21 33 33 31 32 45 32 52 32 34 31 32 45 45 31 31 31 52 24 32 30 26 31 31 39 31 31 29 31 30 42 31 33 32 42 34 32 34 32 13 31 33 17 31 28 35 25 37 32 30 24 21 28 30 18 25 28 31 31 48 47 48 48 48 35 35 19 31 21 31 26 36 20 31 30 31 31 31 23 20 46 30 25 37 22 46 46 46 37 28 42 20 35 27 34 21 31 9 32 31 46 22 48 48 29 25 26 21 13 30 22 35 32 36 30 21 23 8 5 17 16 16 32 6 9 7 46 46 39 46 33 17 10 24 29 22 29 17 18 17 9 5 15 32 28 32 17 8 16 20 16 25 21 24 34 36 24 22 26 9 15 31 8 15 6 25 8 17 13 8 9 22 14 10 19 9 16 15 30 26 6 21 26 18 19 31 11 39 14 17 21 9 9 17 28 11 21 19 17 23 7 26 6 26 11 28 14 28 10 22 8 10 9 11 12 27 16 14 23 14 6 7 7 21 11 14 23 15 10 12 11 23 7 16 29 23 9 7 21 27 9 16 20 4 6 7 6 21 8 7 6 4 4 5 4 6 8 12 15 20 14 15 13 6 5 15 10 8 9 6 3 3 3 3 3 5 5 6 11 4 16 10 10 15 10 23 9 21 4 7 25 8 6 9 16 9 8 14 19 4 6 21 16 4 6 8 9 5 8 8 24 5 6 6 9 30 9 13 17 20 8 6 19 17 9 13 7 15 14 8 25 5 14 9 7 8 25 5 8 11 2 2 2 3 3 5 2 3 3 6 8 8 6 5 11 16 7 4 4 4 7 7 5 11 2 5 8 28 17 30 17 11 6 4 14 3 1 3 14 17 12 5 8 17 30 30 8 8 8 9 8 3 4 7 5 5 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_4168111_4169303
seq2: B6Ng01-212B16.g_66_1264

seq1  GAATTCAGCACATGACCAATTCATGTTATACCTGTTACTGTAGGGTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACATGACCAATTCATGTTATACCTGTTACTGTAGGGTTTTG  50

seq1  TCTGAGGTAACTTGGAGGAACCAGTCCAAAGAAGATAGAAATTCCAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGTAACTTGGAGGAACCAGTCCAAAGAAGATAGAAATTCCAAGTA  100

seq1  CAAATAGGTTCCAAGAAGAATTCAAGTCAATGAACTTCCAGTTAGAGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGGTTCCAAGAAGAATTCAAGTCAATGAACTTCCAGTTAGAGAGG  150

seq1  CTGTCTTTTATCATCCCAAAAAGTGAGCAGAAAGGGGCTCTGAGCATGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTTATCATCCCAAAAAGTGAGCAGAAAGGGGCTCTGAGCATGAT  200

seq1  CTGGTAGGGTCGTGCAGAGGGTGATGAACTTGCCAATCATGCACCAGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGGGTCGTGCAGAGGGTGATGAACTTGCCAATCATGCACCAGTCC  250

seq1  AGCATGAGTGCTGCACCATACTGTGTCTCTCAGCAGTTGGGAACCTTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAGTGCTGCACCATACTGTGTCTCTCAGCAGTTGGGAACCTTAGC  300

seq1  AATTTCCAAAACTCCAACACTGGAGGAGGTAGAGTCATTCCTAGCACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCAAAACTCCAACACTGGAGGAGGTAGAGTCATTCCTAGCACCAA  350

seq1  AAATACTATGGCGAGTACAGGAAAGATCCTTTAAAAAATACCACTGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTATGGCGAGTACAGGAAAGATCCTTTAAAAAATACCACTGCTTA  400

seq1  TTACATGGACAGGAGGTTGTGAGTGTTGGGAACAAGCAAACAACAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGACAGGAGGTTGTGAGTGTTGGGAACAAGCAAACAACAACAAG  450

seq1  AACAACTTGTTCTAAGTACTGCCATTTTGTTTTCAGACTCCATTTATTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTGTTCTAAGTACTGCCATTTTGTTTTCAGACTCCATTTATTCA  500

seq1  TAGGGGTAAACTAAGTTCAAGGTTCTAGGTCCTAGGGGAACTTCTCAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTAAACTAAGTTCAAGGTTCTAGGTCCTAGGGGAACTTCTCAATA  550

seq1  CCTTCTTCTCTGAAGAAGCTGCTGTTGTAAGGACCCAGCTGTCCAAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTCTGAAGAAGCTGCTGTTGTAAGGACCCAGCTGTCCAAGTCC  600

seq1  AGCCTTCTTAGGGTCATCTTGTAAAAAAAACCAATTGTCTAAGTCCAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTAGGGTCATCTTGTAAAAAAAACCAATTGTCTAAGTCCAGAC  650

seq1  ACCTCAAGGACAACTTCTCTATCTTGCTGGCAGGGTTAAACTGATTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAAGGACAACTTCTCTATCTTGCTGGCAGGGTTAAACTGATTTTAT  700

seq1  GTTCCCATGCCCAGGATTTGTGGCAAAATGTAACAATAACTTGGAACAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCATGCCCAGGATTTGTGGCAAAATGTAACAATAACTTGGAACAGA  750

seq1  TGTTTTTGATTTGCAAGGTTAAATATTTGTGATAGTCTGGCTCTTTGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGATTTGCAAGGTTAAATATTTGTGATAGTCTGGCTCTTTGTTG  800

seq1  CAGTTCATCTCTCGAGTCTGTTCAGCACTCTGATCGATCAGTGGTGTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCATCTCTCGAGTCTGTTCAGCACTCTGATCGATCAGTGGTGTCTT  850

seq1  GATTACAATATTTTTTTGTCATCCGCATTGACCTTGTTTTTGAGTTATGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAATATTTTTTTGTCATCCGCATTGACCTTGTTTTTGAGTTATGT  900

seq1  TGGTTTTAAGTGTATCTCATAACTG--TGGGGGGCACGCAAGC-CTGGCA  947
      |||||||||||||||||||||||||   ||||||||||||||| ||||||
seq2  TGGTTTTAAGTGTATCTCATAACTGGTGGGGGGGCACGCAAGCTCTGGCA  950

seq1  CAGGCGTAGTAGTC-ACCAACAGACTCAAGGGTACAGG-TTCCAGTGGCA  995
      |||||||||||||| |||||||||||  |||||||||| |||||||||||
seq2  CAGGCGTAGTAGTCTACCAACAGACTTCAGGGTACAGGTTTCCAGTGGCA  1000

seq1  CGGAGAATAT--CTATGACAGCACAGGAAGCAGAGAAACCTGGACCATA-  1042
      ||||||||||   ||||||||||||||||||||||||||||| | |||| 
seq2  CGGAGAATATTCTTATGACAGCACAGGAAGCAGAGAAACCTGTA-CATAT  1049

seq1  TCACA-CAC-TGCACAGTCT-GCAGAAAACTCAACAGTCTGTAGTGTATC  1089
      ||||| ||| |||||||||| |||| |||||| |||||||||| ||||  
seq2  TCACACCACTTGCACAGTCTGGCAG-AAACTC-ACAGTCTGTATTGTAAT  1097

seq1  CTTTCCAAATGCCTCTGGTCTAAACTTCTTCCAGGCAG-ATCACCTGGTT  1138
      | |||| ||||||||| ||||||||||||| ||||||| ||||||| | |
seq2  CCTTCC-AATGCCTCT-GTCTAAACTTCTT-CAGGCAGAATCACCTTGGT  1144

seq1  TCTGCTTGGCCGATCTGGTCTCAGGGTCTTTTTTGCAG--CTTTTCCCCT  1186
         |||  ||  |||||| ||    |||||||||||||   |||||||||
seq2  --CGCT--GCGAATCTGGACTTCAAGTCTTTTTTGCAGGCTTTTTCCCCT  1190

seq1  CT--GAGAG  1193
      ||  |||||
seq2  CTCGGAGAG  1199

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information