BAC Information

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BAC

Clone NameB6Ng01-212E24
Chromosome13 (Build37)
Map Location 7,537,314 - 7,538,473
singlet/doubletsinglet
Overlap genenone
Upstream genePitrm1, Pfkp, LOC100039532, LOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-212E24.bB6Ng01-212E24.g
ACCGA030141GA030142
length1,1461,174
definitionB6Ng01-212E24.b B6Ng01-212E24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacacccctaagccccttaccccatataaaaacccctagctttc
gagcctagtgaccaacatctgttacctcctgtgtgagatacatgttggtc
cggagctccgtcattaaactacctcgtgtaattacatcaagacggtcttt
tcatgattctttgggtgaacgcagaatcgggaattgagtggaggtctccc
cactgggttctatcaatatctacaataaaactattctccaccatacctag
gagccatcatgtcctcaatttcatttaaaagtaaaggttgctgtcatgag
ttggctgtcctcaaagtcaaacaaatgctatatttgggcattcagctgta
caaaagatcattccagtcaggcttgttggctgggatgatgctcttccctt
ttggaagagcacagagcagtgattctcaaccttctagacaccacgatcag
accctttagtacaattcccctaaccaaaaaaatatttacatggctacttc
ataactacaactatgttactgttgtgaatcataatttgttcccaatggtc
ttcagtgaccactctaaaagggtccttcaatttctaaaggagttgcgacc
cacaggttgagaactaatgggatagaaggttacagaaccctcacctgaac
atccagtttttccttgctacctgctgtacacaactcttcattgtttgggt
ataacctaagggaggtgttgagtatttagccccggaagactggagaaagg
gagatcaatttatttaactacaagatgttgcaggaaatatttaaaaagag
ctcgttccagctcttgagttggcaattctctgacccagcagcctggctgg
ccatgcactggtgaacaatggtggacctgtttttatcttgtggagactct
gactcagaactccccaatatctccacccactggtgggtaactatcatgcc
agccccaggtttcaaagccttccactccttgtctgtaacacttcccacag
aatacaaatacaaacagcactaggccaatccacacagaaagaccatcatc
tggtatggcctttcaggctggtcttcggaaaggacacttctgcgatcctg
ggagtactcttcattaacctctcagtattataaactcaatacaccc

gaattctcacctgaggaatactgaaaggctgagaaacacctgaaaaaatg
ttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccaccccacaccagtcagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctcgtggttcctca
gaaaattgaataaagtactactggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccaccat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagagggatggatacaaaaatatgtggtacatttacacaat
ggagtactactcagctattaaaaagaataaatttacgaaattcctaggca
aatggttggacctggagggcatcatcgtgagtgaggtaacccaatcacaa
aagaactcaaatgaaatgtactcactgataagaggatattagcccagaat
cttagtatagcgagatataaggtacaatatgcaaaacacatgaaactaaa
gaagaacgaagaccaaagtgtgggcactttgctccttcttagaattggaa
acaatcacccatgcaaggagttacagagacaaagcttggagctgagacaa
aaggatggaccatctagagactgccatatccagggatccatcccataatt
agcctccaaaagatgacaccattgcatacactagcaagcctttgttgcaa
ggaccgtgatatagctgtcccttgtgagactaggccggggtctagcaaca
cagaagtggatgatcacagtcaacttattggatggatcacagggccccca
gtggaggagctagtgaatgtatccaaggagctaagagatctgcaccctat
cgtggacacatatgactaccagtaccccagagctctgactctagctgcat
tttgtatcaaagatgctagtcgcattcacttgaaagagagtctcaatggt
caggcaaccttaatgtccagtatagacgctcaggtcaaaattgcaatgtg
gctggtatggcgcatgcacgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7537314_7538473
seq2: B6Ng01-212E24.b_42_1187

seq1  GAATTCCACACCCCTAAGCCCCTTACCCCATATAAAAACCCCTAGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCTAAGCCCCTTACCCCATATAAAAACCCCTAGCTTTC  50

seq1  GAGCCTAGTGACCAACATCTGTTACCTCCTGTGTGAGATACATGTTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGTGACCAACATCTGTTACCTCCTGTGTGAGATACATGTTGGTC  100

seq1  CGGAGCTCCGTCATTAAACTACCTCGTGTAATTACATCAAGACGGTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTCCGTCATTAAACTACCTCGTGTAATTACATCAAGACGGTCTTT  150

seq1  TCATGATTCTTTGGGTGAACGCAGAATCGGGAATTGAGTGGAGGTCTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATTCTTTGGGTGAACGCAGAATCGGGAATTGAGTGGAGGTCTCCC  200

seq1  CACTGGGTTCTATCAATATCTACAATAAAACTATTCTCCACCATACCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGTTCTATCAATATCTACAATAAAACTATTCTCCACCATACCTAG  250

seq1  GAGCCATCATGTCCTCAATTTCATTTAAAAGTAAAGGTTGCTGTCATGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCATGTCCTCAATTTCATTTAAAAGTAAAGGTTGCTGTCATGAG  300

seq1  TTGGCTGTCCTCAAAGTCAAACAAATGCTATATTTGGGCATTCAGCTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGTCCTCAAAGTCAAACAAATGCTATATTTGGGCATTCAGCTGTA  350

seq1  CAAAAGATCATTCCAGTCAGGCTTGTTGGCTGGGATGATGCTCTTCCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATCATTCCAGTCAGGCTTGTTGGCTGGGATGATGCTCTTCCCTT  400

seq1  TTGGAAGAGCACAGAGCAGTGATTCTCAACCTTCTAGACACCACGATCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGAGCACAGAGCAGTGATTCTCAACCTTCTAGACACCACGATCAG  450

seq1  ACCCTTTAGTACAATTCCCCTAACCAAAAAAATATTTACATGGCTACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTAGTACAATTCCCCTAACCAAAAAAATATTTACATGGCTACTTC  500

seq1  ATAACTACAACTATGTTACTGTTGTGAATCATAATTTGTTCCCAATGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTACAACTATGTTACTGTTGTGAATCATAATTTGTTCCCAATGGTC  550

seq1  TTCAGTGACCACTCTAAAAGGGTCCTTCAATTTCTAAAGGAGTTGCGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGACCACTCTAAAAGGGTCCTTCAATTTCTAAAGGAGTTGCGACC  600

seq1  CACAGGTTGAGAACTAATGGGATAGAAGGTTACAGAACCCTCACCTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTTGAGAACTAATGGGATAGAAGGTTACAGAACCCTCACCTGAAC  650

seq1  ATCCAGTTTTTCCTTGCTACCTGCTGTACACAACTCTTCATTGTTTGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTTTTTCCTTGCTACCTGCTGTACACAACTCTTCATTGTTTGGGT  700

seq1  ATAACCTAAGGGAGGTGTTGAGTATTTAGCCCCGGAAGACTGGAGAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTAAGGGAGGTGTTGAGTATTTAGCCCCGGAAGACTGGAGAAAGG  750

seq1  GAGATCAATTTATTTAACTACAAGATGTTGCAGGAAATATTTAAAAAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCAATTTATTTAACTACAAGATGTTGCAGGAAATATTTAAAAAGAG  800

seq1  CTCGTTCCAGCTCTTGAGTTGGCAATTCTCTGACCCAGCAGCCTGGCTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTCCAGCTCTTGAGTTGGCAATTCTCTGACCCAGCAGCCTGGCTGG  850

seq1  CCATGCACTGGTGAACAATGGTGGACCTGTTTTTATCTTGTGGAGACTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCACTGGTGAACAATGGTGGACCTGTTTTTATCTTGTGGAGACTCT  900

seq1  GACTCAGAACTCCCCAATATCTCCACCCACTGGTGGGTAACTATCATGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGAACTCCCCAATATCTCCACCCACTGGTGGGTAACTATCATGCC  950

seq1  AGCCCCAGGTTTCAAAGCC-TCCACTCCTTGTCTGTAACACCTCCCACAG  999
      ||||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  AGCCCCAGGTTTCAAAGCCTTCCACTCCTTGTCTGTAACACTTCCCACAG  1000

seq1  AATACAAATACAAACAGCACTAGGCCAATCCACAACAAGAAAGACCCAAT  1049
      ||||||||||||||||||||||||||||||||||   |||||||||    
seq2  AATACAAATACAAACAGCACTAGGCCAATCCACA--CAGAAAGACC---A  1045

seq1  TCATCTGGTTAATGGCTTTTCAGGCGTGGTCTTCCGGGAAAGGAACAC-T  1098
      |||||||||  ||||| |||||||| ||||||||  ||||||| |||| |
seq2  TCATCTGGT--ATGGCCTTTCAGGC-TGGTCTTC--GGAAAGG-ACACTT  1089

seq1  CTGCGATCCTGTGAGTAACTCCTCATTTAACTCTCCAAGGTATTATAAAC  1148
      ||||||||||| |||| |||| ||||| | |||||    |||||||||||
seq2  CTGCGATCCTGGGAGT-ACTCTTCATTAACCTCTC---AGTATTATAAAC  1135

seq1  TCAATACCACCC  1160
      |||||| |||||
seq2  TCAATA-CACCC  1146


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