BAC Information

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BAC

Clone NameB6Ng01-214D11
Chromosome13 (Build37)
Map Location 77,173,561 - 77,304,236
singlet/doubletdoublet
Overlap geneAnkrd32, 2210408I21Rik, LOC631139
Upstream geneGpr150, Arsk, AK129128, Gm276, Mctp1, LOC666603, EG666607
Downstream geneLOC675063, D13Mgi7, 1110033M05Rik, 1700013G10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214D11.bB6Ng01-214D11.g
ACCGA031525GA031526
length1,2291,174
definitionB6Ng01-214D11.b B6Ng01-214D11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,302,992 - 77,304,236)(77,173,561 - 77,174,755)
sequence
gaattcacaacagaggaatctcgaatggctgagaagcacttaaagaaatg
ttcagaatccttagtgatgagagaaatgcaaatcaaaacgaccctgagat
tccaccttacaccaatcagaatggctaaatctaaaatccttcactaaact
tgctttttactttattggctgtgcaacatatcccaacagtgactctatca
tatcaacatagccatcatgatgcaagctgcaaataatagagaatgtcagt
gtcaatttcaccctctcagacttgcttcccttcacttcatctgattttaa
taatccctgtcaaatcacaaaccatccaaattacgctcatgacacagaag
ctttcaaggagcagacagaatctcaactttcatttagcaactacaaaaga
aagctgtccagatggacaaatattatttccacacttgacaatctctacag
ttgaacacacattttaatttgaactaaacctgccaggagtttgataggcg
cttcttgttttgtgtagattgactcacaggattcctagaccaatgactgt
aactgggatgaaagcactacaggcagcatttatctgctggaagataaatc
acataacaaagcttagagaacaaaaaccagacaatctgtgtgtagagatt
cccatattagggctgttaattactaaatgaagtgtaaatgtacctaacat
attcttgatacaggtttttgaaatgtaatcaaataataactaaaacttga
aagaagctaaaattttactcatattttccactggtaatagactctaaaga
ggaactgtaaagtgatttttaataatcattttggagggctggctaggcta
agtattagtgatagagagtttgcctaagatatacaatgcctcaagttcag
tccccatcagtgcaaaacagatccaccaccaccaataacagtaataataa
ttgcttcagagagacacccacttaaaagtgaacttacaagaaaagtttac
ttgacattacagaaaacctacagttcaatagaaagatagtattcactgat
ggttaaacaattcatatgaggcatgtacgtagttatttttatcggcttac
catccagtacttccctttgtttatctagacagttctcattctagcagcag
gtctcaattgctatgcagcctaagcctgaatcttacatcttctgcactac
ttccggaggtgataggatcaaaaatattt

gaattctgaagcacacagaatctactgggaaggtcaaatgccttcaccca
tttaaagaagcactttcccaaagaacagtttacatgtcattttgtttgat
gttccttgatagtcaaaatttccctactggatgtgcaaattaaggggggg
ggtgctgtttagaggttgagactattgctccatggtagactacttgtctc
agaggtgccaggccctagattcaatccttgtacttggacaagaaaactct
tcaaaataataggaaacaaacaaaactccccaaaacaaacaaacaacccc
ccaaaacaaaacaaaccatcatcagtatatttattttatttttagttgca
ggtagaagtgagcacaaactatggtgtaccctagaggatactgacaaggt
aactttagaatcctctcagtagactgctgggtttatctgccttcccataa
gtaaataagttacatgtttttttttgtttgtttgtttttttcattttcaa
ccaataataaacaaatatcatttagtctcacagcttcctcctttctgtgt
taaatatgaaaagacacttcagaaagccaagttaaggctaccactaaaga
gtagtgagcaatcttcaactgaactttagtgaggatctagtcgaagcagc
attaagactgaaagtatcactgagctgagttgtcaggctcactctcaaag
aaagacacagagcaactgagctacttgacatctgcatcagatgatatcaa
tcataccttactactttgaagaaaaatggcaaaatttaaggctatacgtt
atgcacatatatatatatactttaaataggtattttcttcatttacattt
ccaatgctatcccaaaagtcccccataacctcctgcccactcccctaccc
acccactccacttcttggccctggcattcccctgtactggggtatataaa
gtttgcaagaccaatgggcctctctttccactgatgtacgactagcatct
tctgatacattatgcagctagaagatatatattaaatggagacatgccag
ttaaaattagccacttaacatattcagaacgatcatggtcatgagattgt
cagtttgttaagagactcacttacaacctgatgacttgtcagttccagga
ctaattgaaaggaatcaatggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77302992_77304236
seq2: B6Ng01-214D11.b_45_1273 (reverse)

seq1  AAATATTTTTGATCCTATCA-CTCAGGAAGTAGATGCAGGAAGATTGTAA  49
      |||||||||||||||||||| ||| |||||||| |||| ||||| |||||
seq2  AAATATTTTTGATCCTATCACCTCCGGAAGTAG-TGCA-GAAGA-TGTAA  47

seq1  GA-TCAAGCTTA-GCTACATAGCAAATTTGAGACTTGCCTTGCTAGAATG  97
      || ||| ||||| ||| ||||||||  ||||||| |||  ||||||||||
seq2  GATTCAGGCTTAGGCTGCATAGCAA--TTGAGACCTGC--TGCTAGAATG  93

seq1  AG-ACTGTCTAGGATAACAAAAGGGAAAGGTTACTTGGATGGTAAACCGA  146
      || |||||||| |||||  ||||||||    ||| |||||||||| ||||
seq2  AGAACTGTCTA-GATAAACAAAGGGAA---GTAC-TGGATGGTAAGCCGA  138

seq1  T-AAAATACTTACCGTAACATGCTTCATATGAATTTGTTTTAACCATCAG  195
      | ||||||  || ||| |||||| |||||||||||   ||||||||||||
seq2  TAAAAATAACTA-CGT-ACATGCCTCATATGAATT--GTTTAACCATCAG  184

seq1  TGAATTAACTATCTTTCTATTGAACTGTAGGTTTTCTGTAATTGTCAAGT  245
      |||||  |||||||||||||||||||||||||||||||||| ||||||||
seq2  TGAAT--ACTATCTTTCTATTGAACTGTAGGTTTTCTGTAA-TGTCAAGT  231

seq1  AAAACTTTTCTTGTAAGTTCACTTTTAAGT-GGTGTCTCTCCTGAAGCAA  294
       ||||||||||||||||||||||||||||| ||||||||| |||||||||
seq2  -AAACTTTTCTTGTAAGTTCACTTTTAAGTGGGTGTCTCT-CTGAAGCAA  279

seq1  TTATTATTACTGTTATTGGTGGTGGTGGATCTGTTTTTGCACTGATGGGG  344
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTATTATTACTGTTATTGGTGGTGGTGGATCTG-TTTTGCACTGATGGGG  328

seq1  ACTGAACTTGAGGCATTGTATATCTTAGGCAAACTCTCTATCACTAATAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAACTTGAGGCATTGTATATCTTAGGCAAACTCTCTATCACTAATAC  378

seq1  TTAGCCTAGCCAGCCCTCCAAAATGATTATTAAAAATCACTTTACAGTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTAGCCAGCCCTCCAAAATGATTATTAAAAATCACTTTACAGTTC  428

seq1  CTCTTTAGAGTCTATTACCAGTGGAAAATATGAGTAAAATTTTAGCTTCT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAGAGTCTATTACCAGTGGAAAATATGAGTAAAATTTTAGCTTCT  478

seq1  TTCAAGTTTTAGTTATTATTTGATTACATTTCAAAAACCTGTATCAAGAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTTTTAGTTATTATTTGATTACATTTCAAAAACCTGTATCAAGAA  528

seq1  TATGTTAGGTACATTTACACTTCATTTAGTAATTAACAGCCCTAATATGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAGGTACATTTACACTTCATTTAGTAATTAACAGCCCTAATATGG  578

seq1  GAATCTCTACACACAGATTGTCTGGTTTTTGTTCTCTAAGCTTTGTTATG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCTACACACAGATTGTCTGGTTTTTGTTCTCTAAGCTTTGTTATG  628

seq1  TGATTTATCTTCCAGCAGATAAATGCTGCCTGTAGTGCTTTCATCCCAGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATCTTCCAGCAGATAAATGCTGCCTGTAGTGCTTTCATCCCAGT  678

seq1  TACAGTCATTGGTCTAGGAATCCTGTGAGTCAATCTACACAAAACAAGAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCATTGGTCTAGGAATCCTGTGAGTCAATCTACACAAAACAAGAA  728

seq1  GCGCCTATCAAACTCCTGGCAGGTTTAGTTCAAATTAAAATGTGTGTTCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTATCAAACTCCTGGCAGGTTTAGTTCAAATTAAAATGTGTGTTCA  778

seq1  ACTGTAGAGATTGTCAAGTGTGGAAATAATATTTGTCCATCTGGACAGCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGAGATTGTCAAGTGTGGAAATAATATTTGTCCATCTGGACAGCT  828

seq1  TTCTTTTGTAGTTGCTAAATGAAAGTTGAGATTCTGTCTGCTCCTTGAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTAGTTGCTAAATGAAAGTTGAGATTCTGTCTGCTCCTTGAAA  878

seq1  GCTTCTGTGTCATGAGCGTAATTTGGATGGTTTGTGATTTGACAGGGATT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTGTCATGAGCGTAATTTGGATGGTTTGTGATTTGACAGGGATT  928

seq1  ATTAAAATCAGATGAAGTGAAGGGAAGCAAGTCTGAGAGGGTGAAATTGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAATCAGATGAAGTGAAGGGAAGCAAGTCTGAGAGGGTGAAATTGA  978

seq1  CACTGACATTCTCTATTATTTGCAGCTTGCATCATGATGGCTATGTTGAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACATTCTCTATTATTTGCAGCTTGCATCATGATGGCTATGTTGAT  1028

seq1  ATGATAGAGTCACTGTTGGGATATGTTGCACAGCCAATAAAGTAAAAAGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGAGTCACTGTTGGGATATGTTGCACAGCCAATAAAGTAAAAAGC  1078

seq1  AAGTTTAGTGAAGGATTTTAGATTTAGCCATTCTGATTGGTGTAAGGTGG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTAGTGAAGGATTTTAGATTTAGCCATTCTGATTGGTGTAAGGTGG  1128

seq1  AATCTCAGGGTCGTTTTGATTTGCATTTCTCTCATCACTAAGGATTCTGA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCAGGGTCGTTTTGATTTGCATTTCTCTCATCACTAAGGATTCTGA  1178

seq1  ACATTTCTTTAAGTGCTTCTCAGCCATTCGAGATTCCTCTGTTGTGAATT  1244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTTTAAGTGCTTCTCAGCCATTCGAGATTCCTCTGTTGTGAATT  1228

seq1  C  1245
      |
seq2  C  1229


seq1: chr13_77173561_77174755
seq2: B6Ng01-214D11.g_64_1237

seq1  GAATTCTGAAGCACACAGAATCTACTGGGAAGGTCAAATGCCTTCACCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAAGCACACAGAATCTACTGGGAAGGTCAAATGCCTTCACCCA  50

seq1  TTTAAAGAAGCACTTTCCCAAAGAACAGTTTACATGTCATTTTGTTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGAAGCACTTTCCCAAAGAACAGTTTACATGTCATTTTGTTTGAT  100

seq1  GTTCCTTGATAGTCAAAATTTCCCTACTGGATGTGCAAATTAAGGGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTGATAGTCAAAATTTCCCTACTGGATGTGCAAATTAAGGGGGGG  150

seq1  GGTGCTGTTTAGAGGTTGAGACTATTGCTCCATGGTAGACTACTTGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGTTTAGAGGTTGAGACTATTGCTCCATGGTAGACTACTTGTCTC  200

seq1  AGAGGTGCCAGGCCCTAGATTCAATCCTTGTACTTGGACAAGAAAACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGCCAGGCCCTAGATTCAATCCTTGTACTTGGACAAGAAAACTCT  250

seq1  TCAAAATAATAGGAAACAAACAAAACTCCCCAAAACAAACAAACAACCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAATAGGAAACAAACAAAACTCCCCAAAACAAACAAACAACCCC  300

seq1  CCAAAACAAAACAAACCATCATCAGTATATTTATTTTATTTTTAGTTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACAAAACAAACCATCATCAGTATATTTATTTTATTTTTAGTTGCA  350

seq1  GGTAGAAGTGAGCACAAACTATGGTGTACCCTAGAGGATACTGACAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAAGTGAGCACAAACTATGGTGTACCCTAGAGGATACTGACAAGGT  400

seq1  AACTTTAGAATCCTCTCAGTAGACTGCTGGGTTTATCTGCCTTCCCATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAGAATCCTCTCAGTAGACTGCTGGGTTTATCTGCCTTCCCATAA  450

seq1  GTAAATAAGTTACATGTTTTTTTTTGTTTGTTTGTTTTTTTCATTTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAGTTACATGTTTTTTTTTGTTTGTTTGTTTTTTTCATTTTCAA  500

seq1  CCAATAATAAACAAATATCATTTAGTCTCACAGCTTCCTCCTTTCTGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAATAAACAAATATCATTTAGTCTCACAGCTTCCTCCTTTCTGTGT  550

seq1  TAAATATGAAAAGACACTTCAGAAAGCCAAGTTAAGGCTACCACTAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGAAAAGACACTTCAGAAAGCCAAGTTAAGGCTACCACTAAAGA  600

seq1  GTAGTGAGCAATCTTCAACTGAACTTTAGTGAGGATCTAGTCGAAGCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAGCAATCTTCAACTGAACTTTAGTGAGGATCTAGTCGAAGCAGC  650

seq1  ATTAAGACTGAAAGTATCACTGAGCTGAGTTGTCAGGCTCACTCTCAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGACTGAAAGTATCACTGAGCTGAGTTGTCAGGCTCACTCTCAAAG  700

seq1  AAAGACACAGAGCAACTGAGCTACTTGACATCTGCATCAGATGATATCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACACAGAGCAACTGAGCTACTTGACATCTGCATCAGATGATATCAA  750

seq1  TCATACCTTACTACTTTGAAGAAAAATGGCAAAATTTAAGGCTATACGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACCTTACTACTTTGAAGAAAAATGGCAAAATTTAAGGCTATACGTT  800

seq1  ATGCACATATATATATATACTTTAAATAGGTATTTTCTTCATTTACATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATATATATATATACTTTAAATAGGTATTTTCTTCATTTACATTT  850

seq1  CCAATGCTATCCCAAAAGTCCCCCATAACCTCCTGCCCACTCCCCTACCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCTATCCCAAAAGTCCCCCATAACCTCCTGCCCACTCCCCTACCC  900

seq1  ACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGTATATAA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACT-CCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGTATATAA  949

seq1  AGTTTGCAAGACCAATGGGCCTCTCTTTCCACTGATGTACGACTAGGCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  AGTTTGCAAGACCAATGGGCCTCTCTTTCCACTGATGTACGACTAG--CA  997

seq1  TCTTCTGATACA-TATGCAGCTAG-AGATATATATTAAATGGAGGACATG  1048
      |||||||||||| ||||||||||| |||||||||||||||||| ||||||
seq2  TCTTCTGATACATTATGCAGCTAGAAGATATATATTAAATGGA-GACATG  1046

seq1  CCAAGTTTAAAATTAGCCACTTTAAAACCATATCAAGACAGATTCATGGG  1098
      |||   ||||||||||||||||    | |||||  |||  || |||| ||
seq2  CCA--GTTAAAATTAGCCACTT----AACATATTCAGAACGA-TCAT-GG  1088

seq1  CCATGAAGATTGTTCAGTTGGTAAAGAGACATCACTACCAAACCTGATGA  1148
       |||| |||||| |||||| || ||||||| |||||  | ||||||||||
seq2  TCATG-AGATTG-TCAGTTTGTTAAGAGAC-TCACTTAC-AACCTGATGA  1134

seq1  CCTGTTCAGTTCCCAGGACCCAAATATTGAAAGGATTCCCATGGATA  1195
      | || |||||| |||||||      |||||||||| | | |||||||
seq2  CTTG-TCAGTT-CCAGGAC----TAATTGAAAGGAAT-CAATGGATA  1174


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