BAC Information

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BAC

Clone NameB6Ng01-214F14
Chromosome13 (Build37)
Map Location 101,622,645 - 101,761,336
singlet/doubletdoublet
Overlap geneLOC619865, LOC619917
Upstream geneCartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f, EG667838, Naip1, Gtf2h2, Ocln, LOC667861, Marveld2, Rad17, Taf9, Ccdc125, Cdk7, Mrps36, Cenph, Ccnb1, Slc30a5
Downstream geneEG619937, 4933416M06Rik, LOC100039971, LOC100039983, Pik3r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214F14.bB6Ng01-214F14.g
ACCGA031620GA031621
length839971
definitionB6Ng01-214F14.b B6Ng01-214F14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,760,516 - 101,761,336)(101,622,645 - 101,623,613)
sequence
gaattcctctctatgtaccagaacttctgctttcctattccctgcctaag
ctaattggccaacagcagggctggtttttttttttgttttgttttgtttt
tgtttttattgataagtgatgtttccatatagaacaagagattttctcta
cagagaattttgaatgttcccaacacaaagacatgatgaatgcctgaggt
gtttcctatatcaattaaaattagtcagtacacactatgtacaatacaga
ctatgtacttggcgatagcactgaagacttctcggtattattccactgtg
ctactgtcaggtctcccttcttagcaccagttctctccaagtgagttgta
ccagtatatctttgtggaatttcaagacatttgcaaagaactgcttaact
gaatgggcaagaaattagatataagcacagaactagagaaaaggagcatt
aagaaagtacttaatgggaaagcagcaggtgtggccagcaggtgtggcca
gcaggtgtgaccagcaggtgtggccagcaggtgtggccagcaggtgtgac
cagcaggtgtgatcagcaggtgtggccagcaggtgtggccagcaggtgtg
gccagcaggtgtgaccagcaggtgtgctggaagcagctatcccactcagt
tacattcaggagtgttaagtgttaaatacaacgtggagccatttatgaaa
gaaaagggctcatcatatggtaggccaatggcctttccggtacagatttt
cagtcaggcttcagacaatttatcaaactaaattagctttttccttcatt
tttagtttttaggtaataaatgttaaagttttaacatac
gaattcaggaggctgaggcaggaggattttaagtatcaggtcagcctggg
ctacatttggagagcttgccttggaagaacccaaccaaccaaccaaccag
ccagccagccagccagtcagccaagggaacaaacaaggattagcatagtg
ggaagtacgagtttagatcaagtcagcacagaggacataaaacaaacaaa
caaacaaacaaacgtcaaatgaaacaatcagtgtgaatcagttactagag
ggccatgcttgtaactgaccaaaatggaaaaaaatggcttccctgttgca
actttggtctcaggaagaacacagtttttcctgtgttggatcgggaggtt
aggatgctctttcctttcagcttactagtattgctagtcaactagtctga
tccaagaccaaaaaacagttgttctttcccgcccccttccccgtgtactg
ttggcatgtaacagaaaacaaacccataaaagcagctagtgggtttaaag
aaaatccagaggggcaagctattccagaaatgagtggatgtggcttcagt
attatctattttaaaagattgatttattcatatacagtgttctgtctgca
tgtatgcctgcaggccagaagagggcaccagatcacattctagatggcta
tgaaccaccatgtggttgctgggaattgaactcaggatctctggaagagc
atcggtgcttttaacctctaaggcatctctctagcctggcttaaatcatt
tttattgtttgaaactttcatacatgcatacgtgttttgttcaaatctat
cccctagtagttgatattttataggttcctaatattaggaagttttcctg
gatttgagacttgaatgcaggaccctggctttcataatctatgtagttga
tggtgacatcccttgggaggacagcctgtattctccatggattttgtgga
tcttcagtgggggggtggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_101760516_101761336
seq2: B6Ng01-214F14.b_55_884 (reverse)

seq1  GTATG-TAAAACTTTAACATTTATT-CCT-AAAACT-AAAATGAAGG-AA  45
      ||||| ||||||||||||||||||| ||| |||||| |||||||||| ||
seq2  GTATGTTAAAACTTTAACATTTATTACCTAAAAACTAAAAATGAAGGAAA  50

seq1  AAGCTAATTTAGTTTGAT-AATTGTCTGAAGCCTGACTG-AAATCTGTAC  93
      |||||||||||||||||| |||||||||||||||||||| ||||||||||
seq2  AAGCTAATTTAGTTTGATAAATTGTCTGAAGCCTGACTGAAAATCTGTAC  100

seq1  CGG-AAGGCCATTGGCCTACCATATGATGAGCCCTTTTCTTTCAT-AATG  141
      ||| ||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CGGAAAGGCCATTGGCCTACCATATGATGAGCCCTTTTCTTTCATAAATG  150

seq1  GCTCCACGTTGTATTTAACACTTAACACTCCTGAATGTAACTGAGTGGGA  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACGTTGTATTTAACACTTAACACTCCTGAATGTAACTGAGTGGGA  200

seq1  TAGCTGCTTCCAGCACACCTGCTGGTCACACCTGCTGGCCACACCTGCTG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCTTCCAGCACACCTGCTGGTCACACCTGCTGGCCACACCTGCTG  250

seq1  GCCACACCTGCTGGCCACACCTGCTGATCACACCTGCTGGTCACACCTGC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCTGCTGGCCACACCTGCTGATCACACCTGCTGGTCACACCTGC  300

seq1  TGGCCACACCTGCTGGCCACACCTGCTGGTCACACCTGCTGGCCACACCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACACCTGCTGGCCACACCTGCTGGTCACACCTGCTGGCCACACCT  350

seq1  GCTGGCCACACCTGCTGCTTTCCCATTAAGTACTTTCTTAATGCTCCTTT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCACACCTGCTGCTTTCCCATTAAGTACTTTCTTAATGCTCCTTT  400

seq1  TCTCTAGTTCTGTGCTTATATCTAATTTCTTGCCCATTCAGTTAAGCAGT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAGTTCTGTGCTTATATCTAATTTCTTGCCCATTCAGTTAAGCAGT  450

seq1  TCTTTGCAAATGTCTTGAAATTCCACAAAGATATACTGGTACAACTCACT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCAAATGTCTTGAAATTCCACAAAGATATACTGGTACAACTCACT  500

seq1  TGGAGAGAACTGGTGCTAAGAAGGGAGACCTGACAGTAGCACAGTGGAAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGAACTGGTGCTAAGAAGGGAGACCTGACAGTAGCACAGTGGAAT  550

seq1  AATACCGAGAAGTCTTCAGTGCTATCGCCAAGTACATAGTCTGTATTGTA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCGAGAAGTCTTCAGTGCTATCGCCAAGTACATAGTCTGTATTGTA  600

seq1  CATAGTGTGTACTGACTAATTTTAATTGATATAGGAAACACCTCAGGCAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTGTACTGACTAATTTTAATTGATATAGGAAACACCTCAGGCAT  650

seq1  TCATCATGTCTTTGTGTTGGGAACATTCAAAATTCTCTGTAGAGAAAATC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATGTCTTTGTGTTGGGAACATTCAAAATTCTCTGTAGAGAAAATC  700

seq1  TCTTGTTCTATATGGAAACATCACTTATCAATAAAAACAAAAACAAAACA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTCTATATGGAAACATCACTTATCAATAAAAACAAAAACAAAACA  750

seq1  AAACAAAAAAAAAAACCAGCCCTGCTGTTGGCCAATTAGCTTAGGCAGGG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAAAAAAACCAGCCCTGCTGTTGGCCAATTAGCTTAGGCAGGG  800

seq1  AATAGGAAAGCAGAAGTTCTGGTACATAGA  821
      ||||||||||||||||||||||||||||||
seq2  AATAGGAAAGCAGAAGTTCTGGTACATAGA  830

seq1: chr13_101622645_101623613
seq2: B6Ng01-214F14.g_66_1036

seq1  GAATTCAGGAGGCTGAGGCAGGAGGATTTTAAGTATCAGGTCAGCCTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGGCTGAGGCAGGAGGATTTTAAGTATCAGGTCAGCCTGGG  50

seq1  CTACATTTGGAGAGCTTGCCTTGGAAGAACCCAACCAACCAACCAACCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTGGAGAGCTTGCCTTGGAAGAACCCAACCAACCAACCAACCAG  100

seq1  CCAGCCAGCCAGCCAGTCAGCCAAGGGAACAAACAAGGATTAGCATAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAGCCAGCCAGTCAGCCAAGGGAACAAACAAGGATTAGCATAGTG  150

seq1  GGAAGTACGAGTTTAGATCAAGTCAGCACAGAGGACATAAAACAAACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTACGAGTTTAGATCAAGTCAGCACAGAGGACATAAAACAAACAAA  200

seq1  CAAACAAACAAACGTCAAATGAAACAATCAGTGTGAATCAGTTACTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACGTCAAATGAAACAATCAGTGTGAATCAGTTACTAGAG  250

seq1  GGCCATGCTTGTAACTGACCAAAATGGAAAAAAATGGCTTCCCTGTTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGCTTGTAACTGACCAAAATGGAAAAAAATGGCTTCCCTGTTGCA  300

seq1  ACTTTGGTCTCAGGAAGAACACAGTTTTTCCTGTGTTGGATCGGGAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGTCTCAGGAAGAACACAGTTTTTCCTGTGTTGGATCGGGAGGTT  350

seq1  AGGATGCTCTTTCCTTTCAGCTTACTAGTATTGCTAGTCAACTAGTCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTCTTTCCTTTCAGCTTACTAGTATTGCTAGTCAACTAGTCTGA  400

seq1  TCCAAGACCAAAAAACAGTTGTTCTTTCCCGCCCCCTTCCCCGTGTACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGACCAAAAAACAGTTGTTCTTTCCCGCCCCCTTCCCCGTGTACTG  450

seq1  TTGGCATGTAACAGAAAACAAACCCATAAAAGCAGCTAGTGGGTTTAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCATGTAACAGAAAACAAACCCATAAAAGCAGCTAGTGGGTTTAAAG  500

seq1  AAAATCCAGAGGGGCAAGCTATTCCAGAAATGAGTGGATGTGGCTTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAGAGGGGCAAGCTATTCCAGAAATGAGTGGATGTGGCTTCAGT  550

seq1  ATTATCTATTTTAAAAGATTGATTTATTCATATACAGTGTTCTGTCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTATTTTAAAAGATTGATTTATTCATATACAGTGTTCTGTCTGCA  600

seq1  TGTATGCCTGCAGGCCAGAAGAGGGCACCAGATCACATTCTAGATGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCCTGCAGGCCAGAAGAGGGCACCAGATCACATTCTAGATGGCTA  650

seq1  TGAACCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCTGGAAGAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCACCATGTGGTTGCTGGGAATTGAACTCAGGATCTCTGGAAGAGC  700

seq1  ATCGGTGCTTTTAACCTCTAAGGCATCTCTCTAGCCTGGCTTAAATCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTGCTTTTAACCTCTAAGGCATCTCTCTAGCCTGGCTTAAATCATT  750

seq1  TTTATTGTTTGAAACTTTCATACATGCATACGTGTTTTGTTCAAATCTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGTTTGAAACTTTCATACATGCATACGTGTTTTGTTCAAATCTAT  800

seq1  CCCCTAGTAGTTGATATTTTATAGGTTCCTAATATTAGGAAGTTTTCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTAGTAGTTGATATTTTATAGGTTCCTAATATTAGGAAGTTTTCCTG  850

seq1  GATTTGAGACTTGAATGCAGGACCCTGGCTTTCATAATCTATGTAGTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGACTTGAATGCAGGACCCTGGCTTTCATAATCTATGTAGTTGA  900

seq1  TGGTGACATCCCTT-GGAGGACAGCCTGTATTCTCCATGGATTTTGTGGA  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGGTGACATCCCTTGGGAGGACAGCCTGTATTCTCCATGGATTTTGTGGA  950

seq1  TC-TCAGGTGGGGGGTGGGGC  969
      || ||||  ||||||||||||
seq2  TCTTCAGTGGGGGGGTGGGGC  971