BAC Information

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BAC

Clone NameB6Ng01-218B08
Chromosome13 (Build37)
Map Location 79,174,324 - 79,175,461
singlet/doubletsinglet
Overlap genenone
Upstream gene1110033M05Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052, EG666883
Downstream geneLOC666925
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218B08.bB6Ng01-218B08.g
ACCGA034307GA034308
length1,1221,201
definitionB6Ng01-218B08.b B6Ng01-218B08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctttaatgcaaggcaataagtgagtaaccagaaacatattc
ttagctttaactaaaagaaagcacatgtgtaaaggtgcaaagatcagcaa
aacgataggttcagtggttatctgatacacaaagatatcagctgcttgga
tattgctctctataatttaaagttattaaaaacagcctaattttagagtg
ataatcacaaactttaaatagcctaccctgccttggagtgtatagtgccc
ttgccaggaaagggggaggcagtaagtgtgtggtgcttacctgacacaga
catcattgcatgtgctgaagggagatcctgttccagcgcctttccttcta
aatgtggactaaagttcatggcattgctggtgagaaaacttccaactgta
tagatgaatcttcttccaggagaaaagatgataatgcacagcttagccag
catggagagaagagtaaaaatctggatgcacacatgctcagactctgtcg
atgcctacagcaaggagatattgagttaaaaacactgggaaaatagacta
aatgccaaaagaataaaatagttatattttgtgatttttttatacaatct
gtactttataaatatttgcatgccatttcttattccagcatatagaaatg
tcaaattttactaatttaagcctccattagcaaagcatcagactattttt
ctttaactctcatacagataatttaattgaatataaacattgtgcatatt
cacagcaatttccatacatttattttaataaattagcttaccaggtcaaa
tatgccactgcacaaatttctcgcagactgtcatttgtcctacaacaatc
gtatcttgtatgtgaagtcagtgttgtttctacttcatggggtacatatt
taggggctttatttctcctaatagtaaaatctttctcattgggaaaatgg
gtgaatttacttacctcatttctcccatgtatatattcgtgttaaataat
tttcttcaaacatgtatattaacactttatttatacaatatgtgctctta
aggttctatgtgtcttaatgtgctatctctaactttttatattactaaca
cacttttatacttctagaatta

gaattcacacatctatggacatctggttttttacatcaaaaagccacata
caatcattgggaaaagacagaatctacagcaaatggtgctggtcaaatta
tatgactacaggtagaagaatctgaatagattcatacttattaccctaca
taaaactcaacttcaaatggattatagaactcaacataaaatcagataca
ctgaaaagaagaaaatgtgggcattgcctagaacttattggcataggaac
agtctttctgaaaaggacagtgttagcacaggctgtatgatcagcaatga
atatatgattccttatgaaagtgaaaagactctataaggtaaaggtcact
gtgaactggacatataggcagcatacagaatgggaaaagatttttaccaa
ctctacatagacaagtaaactaatatccaaagtgtataaagtattccaga
aacaagatattaaaaaaataatccaaacagaactgggtatgtataaatgt
gtgcagtttttaatagaggaaactcaaatggctgagaaacacttaaataa
atgttcaacatccttactgtcagggacatgctaaacaatactgctttgaa
attccttgtttcatctgtctgaatggccaagatcaataaaatatacaagt
gttcattctgacaagaatgtggagcacttaatcattgatggtacaatctt
ttatagtcactatggcaatcagtgtggcagttcctcagcaagatgggaat
tgatctacctcaaggtccagctataccacttttgggcatatacccaaagg
acacttcatcctactacagagccactttctcacatatgttcattgctgtt
ctattcatgattgccagaaattggaaacattatagatgtccctcagcaaa
agaatgaagaaaacatacatttatacagtggggttataacttagccatta
caaatgaaataatgaaatttgaaggtaatttgatggtaaactagaaaaaa
taatcctgagtgaggtataccagagctaaaaagaaacattatactatata
tttgcttatggtgggttattagctgttaaatcatgtactaggctacaatc
tggacacacaggagttaggtatgcaagagcactagcagaatcgagacctt
atacgtaggagaaattgaaaattgtttacttgggatgtggtaatgtgcgg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79174324_79175461
seq2: B6Ng01-218B08.b_49_1170

seq1  GAATTCAGTCTTTAATGCAAGGCAATAAGTGAGTAACCAGAAACATATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTTTAATGCAAGGCAATAAGTGAGTAACCAGAAACATATTC  50

seq1  TTAGCTTTAACTAAAAGAAAGCACATGTGTAAAGGTGCAAAGATCAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTAACTAAAAGAAAGCACATGTGTAAAGGTGCAAAGATCAGCAA  100

seq1  AACGATAGGTTCAGTGGTTATCTGATACACAAAGATATCAGCTGCTTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATAGGTTCAGTGGTTATCTGATACACAAAGATATCAGCTGCTTGGA  150

seq1  TATTGCTCTCTATAATTTAAAGTTATTAAAAACAGCCTAATTTTAGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTCTCTATAATTTAAAGTTATTAAAAACAGCCTAATTTTAGAGTG  200

seq1  ATAATCACAAACTTTAAATAGCCTACCCTGCCTTGGAGTGTATAGTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCACAAACTTTAAATAGCCTACCCTGCCTTGGAGTGTATAGTGCCC  250

seq1  TTGCCAGGAAAGGGGGAGGCAGTAAGTGTGTGGTGCTTACCTGACACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGGAAAGGGGGAGGCAGTAAGTGTGTGGTGCTTACCTGACACAGA  300

seq1  CATCATTGCATGTGCTGAAGGGAGATCCTGTTCCAGCGCCTTTCCTTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTGCATGTGCTGAAGGGAGATCCTGTTCCAGCGCCTTTCCTTCTA  350

seq1  AATGTGGACTAAAGTTCATGGCATTGCTGGTGAGAAAACTTCCAACTGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGACTAAAGTTCATGGCATTGCTGGTGAGAAAACTTCCAACTGTA  400

seq1  TAGATGAATCTTCTTCCAGGAGAAAAGATGATAATGCACAGCTTAGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAATCTTCTTCCAGGAGAAAAGATGATAATGCACAGCTTAGCCAG  450

seq1  CATGGAGAGAAGAGTAAAAATCTGGATGCACACATGCTCAGACTCTGTCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGAGAAGAGTAAAAATCTGGATGCACACATGCTCAGACTCTGTCG  500

seq1  ATGCCTACAGCAAGGAGATATTGAGTTAAAAACACTGGGAAAATAGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTACAGCAAGGAGATATTGAGTTAAAAACACTGGGAAAATAGACTA  550

seq1  AATGCCAAAAGAATAAAATAGTTATATTTTGTGATTTTTTTATACAATCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAAAAGAATAAAATAGTTATATTTTGTGATTTTTTTATACAATCT  600

seq1  GTACTTTATAAATATTTGCATGCCATTTCTTATTCCAGCATATAGAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTTATAAATATTTGCATGCCATTTCTTATTCCAGCATATAGAAATG  650

seq1  TCAAATTTTACTAATTTAAGCCTCCATTAGCAAAGCATCAGACTATTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTACTAATTTAAGCCTCCATTAGCAAAGCATCAGACTATTTTT  700

seq1  CTTTAACTCTCATACAGATAATTTAATTGAATATAAACATTGTGCATATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAACTCTCATACAGATAATTTAATTGAATATAAACATTGTGCATATT  750

seq1  CACAGCAATTTCCATACATTTATTTTAATAAATTAGCTTACCAGGTCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATTTCCATACATTTATTTTAATAAATTAGCTTACCAGGTCAAA  800

seq1  TATGCCACTGCACAAATTTCTCGCAGACTGTCATTTGTCCTACAACAATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCACTGCACAAATTTCTCGCAGACTGTCATTTGTCCTACAACAATC  850

seq1  GTATCTTGTATGTGAAGTCAGTGTTGTTTCTACTTCATGGGGTACATATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTGTATGTGAAGTCAGTGTTGTTTCTACTTCATGGGGTACATATT  900

seq1  TAGGGGCTTTATTTCTCCTAATAGTAAAATCTTTCTCATTGGGAAAATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCTTTATTTCTCCTAATAGTAAAATCTTTCTCATTGGGAAAATGG  950

seq1  GTGAATTTACTTACCTCATTTCTCCCATGTTATATATTCGTGTTAAATAA  1000
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GTGAATTTACTTACCTCATTTCTCCCATG-TATATATTCGTGTTAAATAA  999

seq1  TTTTCTTCAAACATGTTATATTAACACTTTATTTATACAATATGTGCTCT  1050
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCAAACATG-TATATTAACACTTTATTTATACAATATGTGCTCT  1048

seq1  TAAGGTTCTTATGTTGTCTTAAATGTGCTATTCCTCTAACTTTTTATAAT  1100
      |||||||| |||| |||||| ||||||||||  |||||||||||||||  
seq2  TAAGGTTC-TATG-TGTCTT-AATGTGCTAT--CTCTAACTTTTTATA--  1091

seq1  TTAACTTAAACAACACTTTTAATACTTCCTAAGAATTA  1138
       | |||  ||| |||||||| |||||||   |||||||
seq2  -TTACT--AAC-ACACTTTT-ATACTTC--TAGAATTA  1122


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