BAC Information

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BAC

Clone NameB6Ng01-222D16
Chromosome13 (Build37)
Map Location 68,626,795 - 68,773,687
singlet/doubletdoublet
Overlap geneLOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2
Upstream geneZfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
Downstream geneLOC666205, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222D16.bB6Ng01-222D16.g
ACCGA037306GA037307
length1,1471,105
definitionB6Ng01-222D16.b B6Ng01-222D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,626,795 - 68,627,943)(68,772,585 - 68,773,687)
sequence
gaattcccactgctgtgaaagttacccccacttctaaatctcctttgtgt
tgggatgtttggatacacagatctactgcaaggcactgaagcaataatta
agtcaataaatgagtcagaagttgggcatcgtttttgtccaaggttttac
taagaacaacacagagactagaaaaggacaactagtttcagtaggagcta
tcaacaatgagtgaggccatcaaaatcattcaaacaaaaactgaagacag
aaacggagctgtttgagcattagtctggattccctggagataactcatta
ctcagtttcattctcaattcaacaattttcttgcagttattaagtaaatg
aagatcacacaagctagagtaggtgctggctgtctgttccccgctcgcta
tgccttggcaggtagcgatatctccattatctccactatggcaaagtgtt
gagagcaggctgggaactggaacacagcacggtggaaatagggaagggca
ggattggaagcctttgtcaccggaaagataaaggcagtaggtttaagcag
agctcctacataattggtttgtggaacatatttggccttttctgattgat
cctaagttgggatgcactgacaaaaaaatagagaaactgggcttgtcaat
caaatcttggccagaagagacagatttttctttgtcttcctgaaatgttt
ggtagagacattggggtgacatgacagagcaggctaattcctgagtggat
ggaaaggtattggctggctgctacagtaccagactcacggttctaccttg
atataaaggttcaatcaccatcttcctcttaaacatgaggtttaggagag
tgctccctctgagtctcctgagcatgaggtttttgagagtgttccatctg
agtctcctgatcatgacgtcttggaggtgctctctttgagtctcctgagc
acgaggtcacagagggagctccttctgagtttcctaagcatgaaggctgt
ggagggtgctcccttctgaatctccgagcacgagatcctggagagtgctc
cctattagtgttcttgagcagagttcttggagggtgcttccctctgaatc
tctgagcacgaagatctggaggggcctccctctgagtcttggcatga
gaattcatagtgacttcctgatcacactatttcttccctgtcttcttcca
tgttccctgagcttttggttgcaaaagctgtgttgtagatgcatctgctc
gcctgggtactacaggatcagttattttctgtattgtggtcaattgtgat
tttgtgtgagtgtctctgtctgttacaaagagaagttcatttggtgaggg
gtgacagctacacttggctgtggacataaggataactgtttataatgcag
tttctttataatacagttagggattatgctggtctagggaagttatgtag
taagttctcctcaaatatccatgatgtcactagccctagatagttgtata
gagagttttcaataccaggcattatttacaagctgttgtgagtccaatta
ggcagatgtttcatcttagttttttgtcttactttataagtgagaaaatc
aaagctcagagaagttaagtgactcacccaaaaatcacatacccagcgac
tggagaacgcagcattgagtcctcttttgtctgactagggcagtattcac
agagtgccttctccagtgtaagctggggataacagcatttagctctctct
gctcaccggggcagtgggtagatgtcactgcagaaagctgacaggtatgg
tcacagttcctgagagcaccaagaacaaatcttccttagatgacaccctg
agtccctgcaagaccaaaaaggctagaatcagaacaccagaagtttccca
aaacagaacatagtcacacagcacaggactagtggaggaggaggagggga
gagccaactcaatttgggacgagatgttgtcaaatagtcacttgcatttt
taaaatctcagtaagcacggcttttcattcggcaccattcccttgttgtt
tccaaaacaaccagcttaaaatatgcactttcagaaatcaaatgtgtcat
ctctgggcagctagggcactagtttcagcatttggaaatggctggttaga
aactgatatttaatcggtaggagaaatgactgcccaattctgcccatact
ttgtatcagggctcaggtcttgggactttcaaaagacttggagtttgtct
gcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68626795_68627943
seq2: B6Ng01-222D16.b_47_1193

seq1  GAATTCCCACTGCTGTGAAAGTTACCCCCACTTCTAAATCTCCTTTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTGCTGTGAAAGTTACCCCCACTTCTAAATCTCCTTTGTGT  50

seq1  TGGGATGTTTGGATACACAGATCTACTGCAAGGCACTGAAGCAATAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATGTTTGGATACACAGATCTACTGCAAGGCACTGAAGCAATAATTA  100

seq1  AGTCAATAAATGAGTCAGAAGTTGGGCATCGTTTTTGTCCAAGGTTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATAAATGAGTCAGAAGTTGGGCATCGTTTTTGTCCAAGGTTTTAC  150

seq1  TAAGAACAACACAGAGACTAGAAAAGGACAACTAGTTTCAGTAGGAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACAACACAGAGACTAGAAAAGGACAACTAGTTTCAGTAGGAGCTA  200

seq1  TCAACAATGAGTGAGGCCATCAAAATCATTCAAACAAAAACTGAAGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAATGAGTGAGGCCATCAAAATCATTCAAACAAAAACTGAAGACAG  250

seq1  AAACGGAGCTGTTTGAGCATTAGTCTGGATTCCCTGGAGATAACTCATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGAGCTGTTTGAGCATTAGTCTGGATTCCCTGGAGATAACTCATTA  300

seq1  CTCAGTTTCATTCTCAATTCAACAATTTTCTTGCAGTTATTAAGTAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTTCATTCTCAATTCAACAATTTTCTTGCAGTTATTAAGTAAATG  350

seq1  AAGATCACACAAGCTAGAGTAGGTGCTGGCTGTCTGTTCCCCGCTCGCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCACACAAGCTAGAGTAGGTGCTGGCTGTCTGTTCCCCGCTCGCTA  400

seq1  TGCCTTGGCAGGTAGCGATATCTCCATTATCTCCACTATGGCAAAGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGGCAGGTAGCGATATCTCCATTATCTCCACTATGGCAAAGTGTT  450

seq1  GAGAGCAGGCTGGGAACTGGAACACAGCACGGTGGAAATAGGGAAGGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCAGGCTGGGAACTGGAACACAGCACGGTGGAAATAGGGAAGGGCA  500

seq1  GGATTGGAAGCCTTTGTCACCGGAAAGATAAAGGCAGTAGGTTTAAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGAAGCCTTTGTCACCGGAAAGATAAAGGCAGTAGGTTTAAGCAG  550

seq1  AGCTCCTACATAATTGGTTTGTGGAACATATTTGGCCTTTTCTGATTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTACATAATTGGTTTGTGGAACATATTTGGCCTTTTCTGATTGAT  600

seq1  CCTAAGTTGGGATGCACTGACAAAAAAATAGAGAAACTGGGCTTGTCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGTTGGGATGCACTGACAAAAAAATAGAGAAACTGGGCTTGTCAAT  650

seq1  CAAATCTTGGCCAGAAGAGACAGATTTTTCTTTGTCTTCCTGAAATGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTTGGCCAGAAGAGACAGATTTTTCTTTGTCTTCCTGAAATGTTT  700

seq1  GGTAGAGACATTGGGGTGACATGACAGAGCAGGCTAATTCCTGAGTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGACATTGGGGTGACATGACAGAGCAGGCTAATTCCTGAGTGGAT  750

seq1  GGAAAGGTATTGGCTGGCTGCTACAGTACCAGACTCACGGTTCTACCTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGTATTGGCTGGCTGCTACAGTACCAGACTCACGGTTCTACCTTG  800

seq1  ATAT-AAGGTTCAATCACCATCTTCCTCTTAAACATGAGGTTTAGGAGAG  849
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGGTTCAATCACCATCTTCCTCTTAAACATGAGGTTTAGGAGAG  850

seq1  TGCTCCCTCTGAGTCTCCTGAGCATGAGGTTTTTGAGAGTGTTCCATCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCTCTGAGTCTCCTGAGCATGAGGTTTTTGAGAGTGTTCCATCTG  900

seq1  AGTCTCCTGATCATGACGTCTTGGAGGGTGCTCTCTTTGAGTCTCCTGAG  949
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGTCTCCTGATCATGACGTCTTGGA-GGTGCTCTCTTTGAGTCTCCTGAG  949

seq1  CACGAGGTCACAGAGGGAGCTCCTTCTGAGTTTCCTAAGCATG-AGGCTG  998
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACGAGGTCACAGAGGGAGCTCCTTCTGAGTTTCCTAAGCATGAAGGCTG  999

seq1  TGGAGGGTGCTCCC-TCTGAATCTCCCGAGCACGAGATCCTGGAGAGTGC  1047
      |||||||||||||| ||||||||| |||||||||||||||||||||||||
seq2  TGGAGGGTGCTCCCTTCTGAATCT-CCGAGCACGAGATCCTGGAGAGTGC  1048

seq1  TCCCTATTAGTG-TCTTGAGCAAGAGGTTCTGGAGGGTGC-TCCCTCTGA  1095
      |||||||||||| |||||||| |||| |  |||||||||| |||||||||
seq2  TCCCTATTAGTGTTCTTGAGC-AGAGTTCTTGGAGGGTGCTTCCCTCTGA  1097

seq1  ATCTCCTGAGCACG-AGATCCTGGAGGGCGCTCCCTCTGAGTCTCTTGAG  1144
      |||| ||||||||| |||| ||||||||  |||||||||||  ||||| |
seq2  ATCT-CTGAGCACGAAGAT-CTGGAGGGGCCTCCCTCTGAG--TCTTG-G  1142

seq1  CATGA  1149
      |||||
seq2  CATGA  1147

seq1: chr13_68772585_68773687
seq2: B6Ng01-222D16.g_66_1170 (reverse)

seq1  TCTGCAGACAAACT-CAAGTCTTTTTGAAAGTTCCCAAGACCTGAGCCCT  49
      |||||||||||||| |||||| ||||||||| ||||||||||||||||| 
seq2  TCTGCAGACAAACTCCAAGTC-TTTTGAAAG-TCCCAAGACCTGAGCCC-  47

seq1  TGATACAAAGTTAATGGCAGGATTGTGCAGTCATTTCTCCTACGATTTAA  99
      |||||||||| ||  ||||| |||| |||||||||||||||||   ||||
seq2  TGATACAAAG-TATGGGCAGAATTGGGCAGTCATTTCTCCTACCGATTAA  96

seq1  ATATCAGTTTCT-ACCAGCCATTTCCAAATGCTG-AACTAGTG-CCTAGC  146
      |||||||||||| ||||||||||||||||||||| |||||||| ||||||
seq2  ATATCAGTTTCTAACCAGCCATTTCCAAATGCTGAAACTAGTGCCCTAGC  146

seq1  TGCCCAGAGATGACACATTTGATTTCTG-AAGTGCATATTTTAAGCTGGT  195
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TGCCCAGAGATGACACATTTGATTTCTGAAAGTGCATATTTTAAGCTGGT  196

seq1  TGTTTTGGAAACAACAA-GGAATGGTGCCGAATGAAAAGCCGTGCTTACT  244
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTTTTGGAAACAACAAGGGAATGGTGCCGAATGAAAAGCCGTGCTTACT  246

seq1  GAGATTTTAAAAATGCAAGTGACTATTTGACAACATCTCGTCCCAAATTG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTAAAAATGCAAGTGACTATTTGACAACATCTCGTCCCAAATTG  296

seq1  AGTTGGCTCTCCCCTCCTCCTCCTCCACTAGTCCTGTGCTGTGTGACTAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTCTCCCCTCCTCCTCCTCCACTAGTCCTGTGCTGTGTGACTAT  346

seq1  GTTCTGTTTTGGGAAACTTCTGGTGTTCTGATTCTAGCCTTTTTGGTCTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTTTTGGGAAACTTCTGGTGTTCTGATTCTAGCCTTTTTGGTCTT  396

seq1  GCAGGGACTCAGGGTGTCATCTAAGGAAGATTTGTTCTTGGTGCTCTCAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGACTCAGGGTGTCATCTAAGGAAGATTTGTTCTTGGTGCTCTCAG  446

seq1  GAACTGTGACCATACCTGTCAGCTTTCTGCAGTGACATCTACCCACTGCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTGACCATACCTGTCAGCTTTCTGCAGTGACATCTACCCACTGCC  496

seq1  CCGGTGAGCAGAGAGAGCTAAATGCTGTTATCCCCAGCTTACACTGGAGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGAGCAGAGAGAGCTAAATGCTGTTATCCCCAGCTTACACTGGAGA  546

seq1  AGGCACTCTGTGAATACTGCCCTAGTCAGACAAAAGAGGACTCAATGCTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTCTGTGAATACTGCCCTAGTCAGACAAAAGAGGACTCAATGCTG  596

seq1  CGTTCTCCAGTCGCTGGGTATGTGATTTTTGGGTGAGTCACTTAACTTCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCCAGTCGCTGGGTATGTGATTTTTGGGTGAGTCACTTAACTTCT  646

seq1  CTGAGCTTTGATTTTCTCACTTATAAAGTAAGACAAAAAACTAAGATGAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTTGATTTTCTCACTTATAAAGTAAGACAAAAAACTAAGATGAA  696

seq1  ACATCTGCCTAATTGGACTCACAACAGCTTGTAAATAATGCCTGGTATTG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGCCTAATTGGACTCACAACAGCTTGTAAATAATGCCTGGTATTG  746

seq1  AAAACTCTCTATACAACTATCTAGGGCTAGTGACATCATGGATATTTGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCTCTATACAACTATCTAGGGCTAGTGACATCATGGATATTTGAG  796

seq1  GAGAACTTACTACATAACTTCCCTAGACCAGCATAATCCCTAACTGTATT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTTACTACATAACTTCCCTAGACCAGCATAATCCCTAACTGTATT  846

seq1  ATAAAGAAACTGCATTATAAACAGTTATCCTTATGTCCACAGCCAAGTGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAACTGCATTATAAACAGTTATCCTTATGTCCACAGCCAAGTGT  896

seq1  AGCTGTCACCCCTCACCAAATGAACTTCTCTTTGTAACAGACAGAGACAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCACCCCTCACCAAATGAACTTCTCTTTGTAACAGACAGAGACAC  946

seq1  TCACACAAAATCACAATTGACCACAATACAGAAAATAACTGATCCTGTAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACAAAATCACAATTGACCACAATACAGAAAATAACTGATCCTGTAG  996

seq1  TACCCAGGCGAGCAGATGCATCTACAACACAGCTTTTGCAACCAAAAGCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGGCGAGCAGATGCATCTACAACACAGCTTTTGCAACCAAAAGCT  1046

seq1  CAGGGAACATGGAAGAAGACAGGGAAGAAATAGTGTGATCAGGAAGTCAC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAACATGGAAGAAGACAGGGAAGAAATAGTGTGATCAGGAAGTCAC  1096

seq1  TATGAATTC  1103
      |||||||||
seq2  TATGAATTC  1105