BAC Information

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BAC

Clone NameB6Ng01-222O07
Chromosome13 (Build37)
Map Location 13,693,025 - 13,834,573
singlet/doubletdoublet
Overlap geneLyst
Upstream geneEro1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1
Downstream geneLOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1, Mrpl32, Psma2, AW209491
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222O07.bB6Ng01-222O07.g
ACCGA037784GA037785
length1,1061,120
definitionB6Ng01-222O07.b B6Ng01-222O07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,693,025 - 13,694,137)(13,833,456 - 13,834,573)
sequence
gaattcaagttgtcgggtttggtagcaagcacttttacccactgaaccat
ctcactggttcactattattattgtttgtatgtatgtgagcctgagtcag
tgtaagtgcaacacatatgtgatggtgcccacaagatcagaataggtgtt
agatcccctggagctggagtgaaaagctgccgtgagcctcctgatatatg
tgctgggaacagaaactgggtcctctgcaagagccgcaagtgcccttaac
taccaagttaactttccagccccactcctcattttttttttaaataaaat
actagcaatgttgttttggcagtgtaatctggttttactcacattaagga
aacaatgtaaatggatcttcatgcttgttacatttcttttttaattagtg
tactgtcatgaaagttcacagtccaaagagacatttagaaatgatctagt
tttaatttttctgaatataagagtaatagggaacaggctgggattaataa
catatacctagttctggggactcaggagtaataggggacaggctgggatt
caaaacatatacctagttctggggactcaggagtaataggggacaggctg
ggattcataacatatacctagttctagggactcaggaggctggatcagga
gcgccctaagtttggagtgacctaggctgattagttagaccctgtttcaa
aacaaactgacaaaccaacatcaagccaacacttagaaagcgagggtggg
ggtcataaatatttgaggaaaaacaaaagttcaaaaatatcttttatttt
tagtctgacatttcatacactgtattactaataccctgaacatttttgtg
tgttttaggaatgtaattctgtagccaaaatatgtctgagtaccatagga
catgtagcaattggcttctagtatgtgattcatgaatatttttattttct
ttatatgtattcttgtttttgttgttgtgttattatagaagtggtctcac
tagcctggctagctaggattcacttggaggcatatttcattgtttaacta
gtgctagaatgcacacggctggtcaccatgcctgagccttactgtcatat
tctttg
gaattccaggacagcgaagactatgcagagaaaccctgtcttgaaaaacc
aaaaccaaccaaacaactacaacaacaacaaaaacaaaaaacactagctg
ctcttccagaggacctagattcaattctcagcactcacatggaggctcac
aattgtctgtaactccagtcctgggagattcaatgctcttctggcctctg
catgtactgcatgcatgtggtacagacacacatgtaggcagaacccccat
acccataaataaaacaataataaaagttattgttttatttacctttaact
aacaggctacaatcttttctatctacgcttttctgggtgtcttatttctc
cattaccgagtggtagtatggaagtgctcagcctgaatctgggtagacaa
agggaagcaagagcagccatttggctggcaaggctaggttagaaaaggta
ctttagcttctgtccccttctcttgggatacttgcctttggagccctgag
tagccaaatagtttgtgaggaagcccaaatcaacctccctgaagaacacc
tctgaaaaagcacagatcaacttaaggaaaggagcagtggatctaccact
cccctgccctatcagcccaagctctgaatgtaaccaaggacacttccttg
acttggacttgcaattaatagcaaatttattgttgctttgagtcactagg
tgttggggtgacttgtcataaagccataataggaatacacatgaagaact
acagacaaaacagaccgtggatgagctctaaactgagatccacatgtgtt
caccccaagctgcaggtgctgatattctgacgtatactttcatactagta
ctgcatactgtgcaccattggagccgcactgaagtgatttcgaatagcca
acatgatgaaacagctccagggcagctagcagattaagtgcattgataat
ttcaccaaatatcccaaggatagcaaacattctaaggtgttttgtctaaa
actgacttaactaaggatatatcctcaccatcatatatttctcaagggtt
cacatgaaattaaggaaggcacccaaagtacccctcccaggagttgctgg
aaactcagtcagggcacagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13693025_13694137
seq2: B6Ng01-222O07.b_44_1149

seq1  GAATTCAAGTTGTCGGGTTTGGTAGCAAGCACTTTTACCCACTGAACCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTTGTCGGGTTTGGTAGCAAGCACTTTTACCCACTGAACCAT  50

seq1  CTCACTGGTTCACTATTATTATTGTTTGTATGTATGTGAGCCTGAGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGGTTCACTATTATTATTGTTTGTATGTATGTGAGCCTGAGTCAG  100

seq1  TGTAAGTGCAACACATATGTGATGGTGCCCACAAGATCAGAATAGGTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTGCAACACATATGTGATGGTGCCCACAAGATCAGAATAGGTGTT  150

seq1  AGATCCCCTGGAGCTGGAGTGAAAAGCTGCCGTGAGCCTCCTGATATATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCCTGGAGCTGGAGTGAAAAGCTGCCGTGAGCCTCCTGATATATG  200

seq1  TGCTGGGAACAGAAACTGGGTCCTCTGCAAGAGCCGCAAGTGCCCTTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAACAGAAACTGGGTCCTCTGCAAGAGCCGCAAGTGCCCTTAAC  250

seq1  TACCAAGTTAACTTTCCAGCCCCACTCCTCATTTTTTTTTTAAATAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGTTAACTTTCCAGCCCCACTCCTCATTTTTTTTTTAAATAAAAT  300

seq1  ACTAGCAATGTTGTTTTGGCAGTGTAATCTGGTTTTACTCACATTAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAATGTTGTTTTGGCAGTGTAATCTGGTTTTACTCACATTAAGGA  350

seq1  AACAATGTAAATGGATCTTCATGCTTGTTACATTTCTTTTTTAATTAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGTAAATGGATCTTCATGCTTGTTACATTTCTTTTTTAATTAGTG  400

seq1  TACTGTCATGAAAGTTCACAGTCCAAAGAGACATTTAGAAATGATCTAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCATGAAAGTTCACAGTCCAAAGAGACATTTAGAAATGATCTAGT  450

seq1  TTTAATTTTTCTGAATATAAGAGTAATAGGGAACAGGCTGGGATTAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTTTCTGAATATAAGAGTAATAGGGAACAGGCTGGGATTAATAA  500

seq1  CATATACCTAGTTCTGGGGACTCAGGAGTAATAGGGGACAGGCTGGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACCTAGTTCTGGGGACTCAGGAGTAATAGGGGACAGGCTGGGATT  550

seq1  CAAAACATATACCTAGTTCTGGGGACTCAGGAGTAATAGGGGACAGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACATATACCTAGTTCTGGGGACTCAGGAGTAATAGGGGACAGGCTG  600

seq1  GGATTCATAACATATACCTAGTTCTAGGGACTCAGGAGGCTGGATCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCATAACATATACCTAGTTCTAGGGACTCAGGAGGCTGGATCAGGA  650

seq1  GCGCCCTAAGTTTGGAGTGACCTAGGCTGATTAGTTAGACCCTGTTTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCCTAAGTTTGGAGTGACCTAGGCTGATTAGTTAGACCCTGTTTCAA  700

seq1  AACAAACTGACAAACCAACATCAAGCCAACACTTAGAAAGCGAGGGTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTGACAAACCAACATCAAGCCAACACTTAGAAAGCGAGGGTGGG  750

seq1  GGTCATAAATATTTGAGGAAAAACAAAAGTTCAAAAATATCTTTTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATAAATATTTGAGGAAAAACAAAAGTTCAAAAATATCTTTTATTTT  800

seq1  TAGTCTGACATTTCATACACTGTATTACTAATACCCTGAACATTTTTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGACATTTCATACACTGTATTACTAATACCCTGAACATTTTTGTG  850

seq1  TGTTTTAGGAATGTAATTCTGTAGCCAAAATATGTCTGAGTACCATAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTTTTAGGAATGTAATTCTGTAGCCAAAATATGTCTGAGTACCATAGG-  899

seq1  ACATGTAGCAATTGGCTTCTAGTATGTGATTCATGAATATTTTTATTTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACATGTAGCAATTGGCTTCTAGTATGTGATTCATGAATATTTTTA-TTTT  948

seq1  CTTTATATGTTATTCTTGTTTTTGTTGTTGTTGTTATTATAGAAGGTGTC  1000
      ||||||||| |||||||||||||||||||| ||||||||||||||  |||
seq2  CTTTATATG-TATTCTTGTTTTTGTTGTTG-TGTTATTATAGAAGTGGTC  996

seq1  TCACTAGCCCTGGCTAGCCTAGAATTCACTT-GAGGCATATTTCATGTTT  1049
      ||||||| ||||||||| |||| |||||||| ||||||||||||||  ||
seq2  TCACTAG-CCTGGCTAG-CTAGGATTCACTTGGAGGCATATTTCATTGTT  1044

seq1  TAACCTAAGTGCTAGAATTGCACAC-GCGTGTCACCATG-CTGAGCTTAC  1097
      ||||   |||||||||| ||||||| ||  ||||||||| |||||| |  
seq2  TAAC--TAGTGCTAGAA-TGCACACGGCTGGTCACCATGCCTGAGCCTTA  1091

seq1  CTGTCCATATTCTTTG  1113
      |||| |||||||||||
seq2  CTGT-CATATTCTTTG  1106

seq1: chr13_13833456_13834573
seq2: B6Ng01-222O07.g_70_1189 (reverse)

seq1  CCTGTTCCCTGACTGAAGGTCTCAGACAACT-CTGGGAGGGGTACTTTTG  49
      ||||| ||||||||||  || ||   ||||| ||||||||||||||||  
seq2  CCTGTGCCCTGACTGA--GTTTCCAGCAACTCCTGGGAGGGGTACTTT--  46

seq1  AGTTGCTTTCCTTAATTTCATGTG-ACCCTTGAG-AATATATGATGTTGA  97
       | ||| ||||||||||||||||| ||||||||| ||||||||||| |||
seq2  GGGTGCCTTCCTTAATTTCATGTGAACCCTTGAGAAATATATGATGGTGA  96

seq1  -GATATATCTTTAGGTAAGTCAGTTTTAGACAAAACACCTTAGAATGTTT  146
       |||||||| |||| |||||||||||||||||||||||||||||||||||
seq2  GGATATATCCTTAGTTAAGTCAGTTTTAGACAAAACACCTTAGAATGTTT  146

seq1  GCTATCTTTGGGATATTTGGTG-AATTATCAATGCACTTAATCTGCTAGC  195
      |||||| ||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTATCCTTGGGATATTTGGTGAAATTATCAATGCACTTAATCTGCTAGC  196

seq1  TGCCCTGGAGCTGTTTCATCATGTTGGCTATTCGAAATCACTTCAGTGCG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGGAGCTGTTTCATCATGTTGGCTATTCGAAATCACTTCAGTGCG  246

seq1  GCTCCAATGGTGCACAGTATGCAGTACTAGTATGAAAGTATACGTCAG-A  294
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTCCAATGGTGCACAGTATGCAGTACTAGTATGAAAGTATACGTCAGAA  296

seq1  TATCAGCACCTGCAGCTTGGGGTGAACACATGTGGATCTCAGTTTAGAGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCACCTGCAGCTTGGGGTGAACACATGTGGATCTCAGTTTAGAGC  346

seq1  TCATCCACGGTCTGTTTTGTCTGTAGTTCTTCATGTGTATTCCTATTATG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCACGGTCTGTTTTGTCTGTAGTTCTTCATGTGTATTCCTATTATG  396

seq1  GCTTTATGACAAGTCACCCCAACACCTAGTGACTCAAAGCAACAATAAAT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTATGACAAGTCACCCCAACACCTAGTGACTCAAAGCAACAATAAAT  446

seq1  TTGCTATTAATTGCAAGTCCAAGTCAAGGAAGTGTCCTTGGTTACATTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTATTAATTGCAAGTCCAAGTCAAGGAAGTGTCCTTGGTTACATTCA  496

seq1  GAGCTTGGGCTGATAGGGCAGGGGAGTGGTAGATCCACTGCTCCTTTCCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTTGGGCTGATAGGGCAGGGGAGTGGTAGATCCACTGCTCCTTTCCT  546

seq1  TAAGTTGATCTGTGCTTTTTCAGAGGTGTTCTTCAGGGAGGTTGATTTGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGATCTGTGCTTTTTCAGAGGTGTTCTTCAGGGAGGTTGATTTGG  596

seq1  GCTTCCTCACAAACTATTTGGCTACTCAGGGCTCCAAAGGCAAGTATCCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCACAAACTATTTGGCTACTCAGGGCTCCAAAGGCAAGTATCCC  646

seq1  AAGAGAAGGGGACAGAAGCTAAAGTACCTTTTCTAACCTAGCCTTGCCAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAGGGGACAGAAGCTAAAGTACCTTTTCTAACCTAGCCTTGCCAG  696

seq1  CCAAATGGCTGCTCTTGCTTCCCTTTGTCTACCCAGATTCAGGCTGAGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGGCTGCTCTTGCTTCCCTTTGTCTACCCAGATTCAGGCTGAGCA  746

seq1  CTTCCATACTACCACTCGGTAATGGAGAAATAAGACACCCAGAAAAGCGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATACTACCACTCGGTAATGGAGAAATAAGACACCCAGAAAAGCGT  796

seq1  AGATAGAAAAGATTGTAGCCTGTTAGTTAAAGGTAAATAAAACAATAACT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAAAAGATTGTAGCCTGTTAGTTAAAGGTAAATAAAACAATAACT  846

seq1  TTTATTATTGTTTTATTTATGGGTATGGGGGTTCTGCCTACATGTGTGTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTGTTTTATTTATGGGTATGGGGGTTCTGCCTACATGTGTGTC  896

seq1  TGTACCACATGCATGCAGTACATGCAGAGGCCAGAAGAGCATTGAATCTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCACATGCATGCAGTACATGCAGAGGCCAGAAGAGCATTGAATCTC  946

seq1  CCAGGACTGGAGTTACAGACAATTGTGAGCCTCCATGTGAGTGCTGAGAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTGGAGTTACAGACAATTGTGAGCCTCCATGTGAGTGCTGAGAA  996

seq1  TTGAATCTAGGTCCTCTGGAAGAGCAGCTAGTGTTTTTTGTTTTTGTTGT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCTAGGTCCTCTGGAAGAGCAGCTAGTGTTTTTTGTTTTTGTTGT  1046

seq1  TGTTGTAGTTGTTTGGTTGGTTTTGGTTTTTCAAGACAGGGTTTCTCTGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAGTTGTTTGGTTGGTTTTGGTTTTTCAAGACAGGGTTTCTCTGC  1096

seq1  ATAGTCTTCGCTGTCCTGGAATTC  1118
      ||||||||||||||||||||||||
seq2  ATAGTCTTCGCTGTCCTGGAATTC  1120