BAC Information

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BAC

Clone NameB6Ng01-224D15
Chromosome13 (Build37)
Map Location 117,549,429 - 117,683,165
singlet/doubletdoublet
Overlap geneParp8
Upstream geneEG623174, Isl1, EG668276, Gm280, LOC100041169
Downstream geneLOC668288, LOC623312, Emb, EG623365, LOC382807, Hcn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224D15.bB6Ng01-224D15.g
ACCGA038747GA038748
length1,1931,093
definitionB6Ng01-224D15.b B6Ng01-224D15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,681,974 - 117,683,165)(117,549,429 - 117,550,523)
sequence
gaattcaattagatttgcaaagcttttaatctttattaagtaggccatgt
agtcttctcatctcatgagtggtggaggacacttgtctcataattaagaa
taatattctagttatatattagagaattttgtctgtgaacactgtgatca
gtgacagagtccaagagtctcatacaaagtttttctcgatgaccattctg
tgctaatgcagtttcggggtcagtgtgggttcagtggatgactatgtggt
tggccttacacaaaatcgacctcttcagtgattaacattatagccaactt
ctgacagacttaaattatacatgtagttacacaataatggttgatgaaag
ttttgtttgctcttttatatatgtgtatgttgtgtgtgttgttttaatga
ttcatagggatacacccagccatatataagttgacaagaataagagactg
cttttaggaagtcatcttacaaagactttcccctacaactgaatcacggc
tactactgtaaaattatacttgtattaggaaaccttgacaacctttataa
ttttatatgaattttattttaaaagtccatttaaaggcatgctcttgcaa
catggagaaaattgtgtcagtcaagtacacaaggattgttttccatgata
gtttcactgagaaaagataatttctgatagtttgtcaaagaaactgcgta
tattttttcatgttcttagcccagtaagagattgagtactggaacctttg
ctagtagctgtataattttccttaaaggaatcattgcaagtgataagatt
taaatattctaatgagggtgtagactgttttgggtcagcaatagaacaaa
ttaactttctttgcatgtaataatgacagccattccctactaaaagatga
gaaattaagaatatcattttgtttaggcaaagttgcagatgatgcaactg
tgacaagaatttagtaaagaaacttaacattttataatatactatctgac
attactaatgtggccatctgcattcatttctgagagtaagagctgcatgt
taacattttcccccaatgaaaaatactttttttttttttttaacttggct
tttatagaacaattggtgccaaagcatccaatctgagaacccgccgcctt
tcctgtgtcaggtatgacctaagaccatgttactgttagggag

gaattcaggtcttcatgtttacaaggaagtaattgattaggtgacccatc
tccacagctctcaaacaacaacatggagaagagtttcaagtgaatgctgc
aataatctgtgcaaaatgttcattacctcaacaaagatgaagttctttac
ttggcaggatggatcaagatctcttttattgttctaacagtgtgtagact
tcatgagtcaaaaacacctcattttgttgctggtgaaaagaaagatgtta
tgtgatgttattagcccatagatggaggaataaacaaaaggacatttgga
gataattggttgtggttttctgaatcagacttatcttaaagattactagg
ttaatttaacaaagacagcagcagacataattatttccaatctattttgt
cccgcagcagtagacccatttctcccagtcttctaacctgcatgtacctg
ccttgtatgttgaattcctttcttagttaaaataaaactattttgaggat
tcccatttcatggtagcaagaattactacttacaaattatgggatatgat
cagagacctcaagtgaccaaatcctactttcacaaaactcaaattttacc
tctgtgactggtgctcttcattccaaaacaactctgcttcttgatcttgt
atttagaaccagattctgcacataatctctacaaatattacttcatttaa
tgttaacaatggtcctgaaggacaaacaatggtatttgtcttgctttaga
aatgataacaccaaggcttacagattctgaacaagttggtcaaagcaata
taacacaaccatctcttctggagtccttccttttttgtttgtttatttat
attagtaattcatttactaagatatttatctaatacttacatgtattttt
tagatttattaattattttctttatttttgtcccaaatgttgctcccctc
ccagtcccctcaaataattcttcctccatcacccctctctcactctgaga
aggagcccatcaccagtatccccatcactatattatcaagtttctacagt
atgaaggccagataagtcagttctctgcctacatctattgccg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117681974_117683165
seq2: B6Ng01-224D15.b_44_1236 (reverse)

seq1  CTCCC-AACAGT-ACATGGTCTTAGCTCATACCTGCACCAGGAA--GCCG  46
      ||||| |||||| |||||||||||| |||||||||   ||||||  || |
seq2  CTCCCTAACAGTAACATGGTCTTAGGTCATACCTGACACAGGAAAGGCGG  50

seq1  CGG--TCTCGGATTGGAATGCTTTTTGCACCATTTG-TCTATAAAAAGCA  93
      |||  |||| |||||| |||| ||| |||||| ||| ||||| |||||| 
seq2  CGGGTTCTCAGATTGG-ATGC-TTTGGCACCAATTGTTCTAT-AAAAGCC  97

seq1  AAGTTTAAAAAAAAAAAAAAAAGTAATTTTTTCATT-GGGGAAAATG-TA  141
      |||||  ||||||||||||||||||  ||||||||| |||||||||| ||
seq2  AAGTT--AAAAAAAAAAAAAAAGTA--TTTTTCATTGGGGGAAAATGTTA  143

seq1  ACATTGCAGCTCTTACCTTCTTCAGAAATGAATGCAGATGGCCACATTAG  191
      ||| ||||||||||||  || |||||||||||||||||||||||||||||
seq2  ACA-TGCAGCTCTTAC--TC-TCAGAAATGAATGCAGATGGCCACATTAG  189

seq1  TATTGTCAGATAGTATATTATTAAAATGTTAAGTTTCTTTACT-AATTC-  239
      || ||||||||||||||||| |||||||||||||||||||||| ||||| 
seq2  TAATGTCAGATAGTATATTA-TAAAATGTTAAGTTTCTTTACTAAATTCT  238

seq1  TGTCACAGTTGCATCATCTGCAACTTTGCCTAAACAAAATGATATTCTTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGTTGCATCATCTGCAACTTTGCCTAAACAAAATGATATTCTTA  288

seq1  ATTTCTCATCTTTTAGTA-GGAATGGCTGTCATTATTACATGCAAAGAAA  338
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATTTCTCATCTTTTAGTAGGGAATGGCTGTCATTATTACATGCAAAGAAA  338

seq1  GTTAATTTGTTCTATTGCTGACCCAAAACAGTCTACACCCTCATTAGAAT  388
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTGTTCTATTGCTGACCCAAAACAGTCTACACCCTCATTAGAAT  388

seq1  ATTTAAATCTTATCACTTGCAATGATTCCTTTAAGGAAAATTATACAGCT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATCTTATCACTTGCAATGATTCCTTTAAGGAAAATTATACAGCT  438

seq1  ACTAGCAAAGGTTCCAGTACTCAATCTCTTACTGGGCTAAGAACATGAAA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGCAAAGGTTCCAGTACTCAATCTCTTACTGGGCTAAGAACATGAAA  488

seq1  AAATATACGCAGTTTCTTTGACAAACTATCAGAAATTATC-TTTCTCAGT  537
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AAATATACGCAGTTTCTTTGACAAACTATCAGAAATTATCTTTTCTCAGT  538

seq1  GAAACTATCATGGAAAACAATCCTTGTGTACTTGACTGACACAATTTTCT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATCATGGAAAACAATCCTTGTGTACTTGACTGACACAATTTTCT  588

seq1  CCATGTTGCAAGAGCATGCCTTTAAATGGACTTTTAAAATAAAATTCATA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTTGCAAGAGCATGCCTTTAAATGGACTTTTAAAATAAAATTCATA  638

seq1  TAAAATTATAAAGGTTGTCAAGGTTTCCTAATACAAGTATAATTTTACAG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTATAAAGGTTGTCAAGGTTTCCTAATACAAGTATAATTTTACAG  688

seq1  TAGTAGCCGTGATTCAGTTGTAGGGGAAAGTCTTTGTAAGATGACTTCCT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCCGTGATTCAGTTGTAGGGGAAAGTCTTTGTAAGATGACTTCCT  738

seq1  AAAAGCAGTCTCTTATTCTTGTCAACTTATATATGGCTGGGTGTATCCCT  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAGTCTCTTATTCTTGTCAACTTATATATGGCTGGGTGTATCCCT  788

seq1  ATGAATCATTAAAACAACACACACAACATACACATATATAAAAGAGCAAA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCATTAAAACAACACACACAACATACACATATATAAAAGAGCAAA  838

seq1  CAAAACTTTCATCAACCATTATTGTGTAACTACATGTATAATTTAAGTCT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTTTCATCAACCATTATTGTGTAACTACATGTATAATTTAAGTCT  888

seq1  GTCAGAAGTTGGCTATAATGTTAATCACTGAAGAGGTCGATTTTGTGTAA  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAGTTGGCTATAATGTTAATCACTGAAGAGGTCGATTTTGTGTAA  938

seq1  GGCCAACCACATAGTCATCCACTGAACCCACACTGACCCCGAAACTGCAT  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACCACATAGTCATCCACTGAACCCACACTGACCCCGAAACTGCAT  988

seq1  TAGCACAGAATGGTCATCGAGAAAAACTTTGTATGAGACTCTTGGACTCT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGAATGGTCATCGAGAAAAACTTTGTATGAGACTCTTGGACTCT  1038

seq1  GTCACTGATCACAGTGTTCACAGACAAAATTCTCTAATATATAACTAGAA  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGATCACAGTGTTCACAGACAAAATTCTCTAATATATAACTAGAA  1088

seq1  TATTATTCTTAATTATGAGACAAGTGTCCTCCACCACTCATGAGATGAGA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTTAATTATGAGACAAGTGTCCTCCACCACTCATGAGATGAGA  1138

seq1  AGACTACATGGCCTACTTAATAAAGATTAAAAGCTTTGCAAATCTAATTG  1187
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTACATGGCCTACTTAATAAAGATTAAAAGCTTTGCAAATCTAATTG  1188

seq1  AATTC  1192
      |||||
seq2  AATTC  1193


seq1: chr13_117549429_117550523
seq2: B6Ng01-224D15.g_67_1159

seq1  GAATTCAGGTCTTCATGTTTACAAGGAAGTAATTGATTAGGTGACCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCTTCATGTTTACAAGGAAGTAATTGATTAGGTGACCCATC  50

seq1  TCCACAGCTCTCAAACAACAACATGGAGAAGAGTTTCAAGTGAATGCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGCTCTCAAACAACAACATGGAGAAGAGTTTCAAGTGAATGCTGC  100

seq1  AATAATCTGTGCAAAATGTTCATTACCTCAACAAAGATGAAGTTCTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCTGTGCAAAATGTTCATTACCTCAACAAAGATGAAGTTCTTTAC  150

seq1  TTGGCAGGATGGATCAAGATCTCTTTTATTGTTCTAACAGTGTGTAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGGATGGATCAAGATCTCTTTTATTGTTCTAACAGTGTGTAGACT  200

seq1  TCATGAGTCAAAAACACCTCATTTTGTTGCTGGTGAAAAGAAAGATGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGAGTCAAAAACACCTCATTTTGTTGCTGGTGAAAAGAAAGATGTTA  250

seq1  TGTGATGTTATTAGCCCATAGATGGAGGAATAAACAAAAGGACATTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATGTTATTAGCCCATAGATGGAGGAATAAACAAAAGGACATTTGGA  300

seq1  GATAATTGGTTGTGGTTTTCTGAATCAGACTTATCTTAAAGATTACTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTGGTTGTGGTTTTCTGAATCAGACTTATCTTAAAGATTACTAGG  350

seq1  TTAATTTAACAAAGACAGCAGCAGACATAATTATTTCCAATCTATTTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTAACAAAGACAGCAGCAGACATAATTATTTCCAATCTATTTTGT  400

seq1  CCCGCAGCAGTAGACCCATTTCTCCCAGTCTTCTAACCTGCATGTACCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCAGCAGTAGACCCATTTCTCCCAGTCTTCTAACCTGCATGTACCTG  450

seq1  CCTTGTATGTTGAATTCCTTTCTTAGTTAAAATAAAACTATTTTGAGGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTATGTTGAATTCCTTTCTTAGTTAAAATAAAACTATTTTGAGGAT  500

seq1  TCCCATTTCATGGTAGCAAGAATTACTACTTACAAATTATGGGATATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTCATGGTAGCAAGAATTACTACTTACAAATTATGGGATATGAT  550

seq1  CAGAGACCTCAAGTGACCAAATCCTACTTTCACAAAACTCAAATTTTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCTCAAGTGACCAAATCCTACTTTCACAAAACTCAAATTTTACC  600

seq1  TCTGTGACTGGTGCTCTTCATTCCAAAACAACTCTGCTTCTTGATCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGACTGGTGCTCTTCATTCCAAAACAACTCTGCTTCTTGATCTTGT  650

seq1  ATTTAGAACCAGATTCTGCACATAATCTCTACAAATATTACTTCATTTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAACCAGATTCTGCACATAATCTCTACAAATATTACTTCATTTAA  700

seq1  TGTTAACAATGGTCCTGAAGGACAAACAATGGTATTTGTCTTGCTTTAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACAATGGTCCTGAAGGACAAACAATGGTATTTGTCTTGCTTTAGA  750

seq1  AATGATAACACCAAGGCTTACAGATTCTGAACAAGTTGGTCAAAGCAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATAACACCAAGGCTTACAGATTCTGAACAAGTTGGTCAAAGCAATA  800

seq1  TAACACAACCATCTCTTCTGGAGTCCTTCCTTTTTTGTTTGTTTATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAACCATCTCTTCTGGAGTCCTTCCTTTTTTGTTTGTTTATTTAT  850

seq1  ATTAGTAATTCATTTACTAAGATATTTATCTAATACTTACATGTA-TTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATTAGTAATTCATTTACTAAGATATTTATCTAATACTTACATGTATTTTT  900

seq1  TAGA-TTATTAATTATTTTCTTTATTTTTGTCCCAAATGTTGCTCCCCTC  948
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTATTAATTATTTTCTTTATTTTTGTCCCAAATGTTGCTCCCCTC  950

seq1  CCAGTCCCCCTCAAATAATTCTTCCTCCCATCACCCCTCTCCTCCACCTC  998
      ||||| |||||||||||||||||||| ||||||||||||| |||   |||
seq2  CCAGT-CCCCTCAAATAATTCTTCCT-CCATCACCCCTCT-CTC--ACTC  995

seq1  TGAGAAGGAGCCCATCACCCAGTATCCCCCATCACTATA-TATCAAGTTT  1047
      ||||||||||||||||| ||||||| ||||||||||||| ||||||||||
seq2  TGAGAAGGAGCCCATCA-CCAGTAT-CCCCATCACTATATTATCAAGTTT  1043

seq1  CTACAGTAATGAGGCCAGATAAGTCAGTCCTCTG-CTACATCTA-TGCCG  1095
      ||||||||   ||||||||||||||||| ||||| ||||||||| |||||
seq2  CTACAGTATGAAGGCCAGATAAGTCAGTTCTCTGCCTACATCTATTGCCG  1093


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