BAC Information

Click to search

BAC

Clone NameB6Ng01-225I08
Chromosome13 (Build37)
Map Location 67,086,949 - 67,278,655
singlet/doubletdoublet
Overlap genePtdss1, Zfp712, Zfp708, Zfp759, Rsl1
Upstream geneEG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1
Downstream geneLOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225I08.bB6Ng01-225I08.g
ACCGA039693GA039694
length1,1441,167
definitionB6Ng01-225I08.b B6Ng01-225I08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,086,949 - 67,088,097)(67,277,483 - 67,278,655)
sequence
gaattcacaatggtttgttgccagcattagtcatctacttgtagatatta
gttacttttctcactgctctgaccaaataaatggcaaaacaactcaaagg
agaaagggtttcttctggttcatactttgagggtgcagtctaccatagta
gagaaggcaggtttgtcaagcactgtttgtcaaggctgtggcagcaaaga
ggacatgaagtggagctagccataaacctcaaggcttgtttcccagagat
ccactgcctccattgagacccctcctaacagttttatagcctcctaaaca
gcactaccaactgtagactaactattaatatgtaaatacaagcttgttga
ggaggacattttgttcttaaactgtaacaccatgctttttgaaaagggac
tcaaatctgagtgaacaaacagaactctcatatgctcaggatgttctgta
tgccttactcgaagatagtcacacttgtgtcccagcaaaagaagggagag
gaggcagtctccagcccacaacaacaagctctatagcagcagctgaactc
tgaccagaaaacagatagtgtacaagccatgcgtgaacgcaacctcattg
tttagaaagtcccagtcaaagggtgactctgaccagcaacaaaatcgact
gcgttctaggattagttcatggtctaggtttcaaggctggatttctgtct
tctgtaagaatttatgagtttaaatgatgcttagtaatgcatcatgggct
tttggggggaggggctgttaaagagcagtgttctttaatttcagatagca
gccatttaactttgtttgggtgcataccgaaggaaaaagactcccaagct
cttttttcaagaagactttagaaccagccatgtatttgatgatggctgtg
actttttgtgccttgccagtggacagagggaccaagctaatcatttcacc
aatactttgactgtctagattctgttccaaaacatagatcctttaaattt
aattgaacatcttattcctctgctatctttctagctactatataccctaa
cctcatcattcttacctcacttttgagcttaataaagtctgatacttttg
ttaatattttaatttaaaggaagtcatgagttaattgcatatgt
gaattcctcagcagactgtgagacaatattcgacagatgctacctaagat
cagtgagaaatgaactgtccaaagggactcctgttagtctgaatttatcc
aacggctccccagcccaatttgtcctaatcaacagaactgaaattgttga
gcaccctgcttctgcctgcctctgtgtcatgggaacatatcattgatttt
attaaccaagacatgctcacttcagtatgagagctttctggcacaagtct
gccttaacaccatcaaaaaagtgactcccggtctgaccaatactcagttg
catttccccgagtgttacattacaatagagactcagcaacaagaaaaatc
ttggaagtccatgtaaaaacatacacagggcacactgtttgcaaaatata
aatcctaagagacttaagccaccataaatgtctgagagatgtgaaggaga
gacctaaagaatgatgttcataatacattatttcaaggcacatgggaaag
cctggctgttggatctttggacttgaactctgtcccctgacgcccacttt
cctacatacctgggtacacaggggccgttccttgtctcttcatgtcccaa
ggcccttgtatttgctccagaaatgtcaccaggaatggcttagagacagc
aagacctggttggagaacaagaagttaagattgcttaagtgttcttttac
tctctctttcagtacagtgtttataaggaaagacatgatacaataaataa
ctgcagacaattagttccttcaagggtttctgacatggacagtaaaatac
agaaaggaatgtacaatatcctgattctgagtttctttagagggaaaaca
tgaaactgaatggagaaacaatttcattaacaaatgtggtccacgcctga
tgtgggtgcatttctaacagtctcagaagactaaagggaggcatgcttcc
cacacagacattcaaacacagcaaggaaaataatgacatgtttcttagct
gtacagtaacctcccctattttctcaatgatggatatgaactcgttgtga
aatacttccatgagaatattgtacaagcgggagagctaacatgtcatgta
gggtgagaattgtattctcttatagaatacatgcctcactcagaacctca
ggtggctgaaaattctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67086949_67088097
seq2: B6Ng01-225I08.b_46_1189

seq1  GAATTCACAATGGTTTGTTGCCAGCATTAGTCATCTACTTGTAGATATTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAATGGTTTGTTGCCAGCATTAGTCATCTACTTGTAGATATTA  50

seq1  GTTACTTTTCTCACTGCTCTGACCAAATAAATGGCAAAACAACTCAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTTTCTCACTGCTCTGACCAAATAAATGGCAAAACAACTCAAAGG  100

seq1  AGAAAGGGTTTCTTCTGGTTCATACTTTGAGGGTGCAGTCTACCATAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGGTTTCTTCTGGTTCATACTTTGAGGGTGCAGTCTACCATAGTA  150

seq1  GAGAAGGCAGGTTTGTCAAGCACTGTTTGTCAAGGCTGTGGCAGCAAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGCAGGTTTGTCAAGCACTGTTTGTCAAGGCTGTGGCAGCAAAGA  200

seq1  GGACATGAAGTGGAGCTAGCCATAAACCTCAAGGCTTGTTTCCCAGAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATGAAGTGGAGCTAGCCATAAACCTCAAGGCTTGTTTCCCAGAGAT  250

seq1  CCACTGCCTCCATTGAGACCCCTCCTAACAGTTTTATAGCCTCCTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGCCTCCATTGAGACCCCTCCTAACAGTTTTATAGCCTCCTAAACA  300

seq1  GCACTACCAACTGTAGACTAACTATTAATATGTAAATACAAGCTTGTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTACCAACTGTAGACTAACTATTAATATGTAAATACAAGCTTGTTGA  350

seq1  GGAGGACATTTTGTTCTTAAACTGTAACACCATGCTTTTTGAAAAGGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACATTTTGTTCTTAAACTGTAACACCATGCTTTTTGAAAAGGGAC  400

seq1  TCAAATCTGAGTGAACAAACAGAACTCTCATATGCTCAGGATGTTCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATCTGAGTGAACAAACAGAACTCTCATATGCTCAGGATGTTCTGTA  450

seq1  TGCCTTACTCGAAGATAGTCACACTTGTGTCCCAGCAAAAGAAGGGAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTACTCGAAGATAGTCACACTTGTGTCCCAGCAAAAGAAGGGAGAG  500

seq1  GAGGCAGTCTCCAGCCCACAACAACAAGCTCTATAGCAGCAGCTGAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGTCTCCAGCCCACAACAACAAGCTCTATAGCAGCAGCTGAACTC  550

seq1  TGACCAGAAAACAGATAGTGTACAAGCCATGCGTGAACGCAACCTCATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGAAAACAGATAGTGTACAAGCCATGCGTGAACGCAACCTCATTG  600

seq1  TTTAGAAAGTCCCAGTCAAAGGGTGACTCTGACCAGCAACAAAATCGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAAGTCCCAGTCAAAGGGTGACTCTGACCAGCAACAAAATCGACT  650

seq1  GCGTTCTAGGATTAGTTCATGGTCTAGGTTTCAAGGCTGGATTTCTGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCTAGGATTAGTTCATGGTCTAGGTTTCAAGGCTGGATTTCTGTCT  700

seq1  TCTGTAAGAATTTATGAGTTTAAATGATGCTTAGTAATGCATCATGGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGAATTTATGAGTTTAAATGATGCTTAGTAATGCATCATGGGCT  750

seq1  TTTGGGGGGAGGGGCTGTTAAAGAGCAGTGTTCTTTAATTTCAGATAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGGAGGGGCTGTTAAAGAGCAGTGTTCTTTAATTTCAGATAGCA  800

seq1  GCCATTTAACTTTGTTTGGGTGCATACCGAAGGAAAAAGACTCCCAAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTTAACTTTGTTTGGGTGCATACCGAAGGAAAAAGACTCCCAAGCT  850

seq1  C-TTTTTCAAGAAGACTTTAGAACCAGCCATGTATTTGATGATGGCTGTG  899
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCAAGAAGACTTTAGAACCAGCCATGTATTTGATGATGGCTGTG  900

seq1  AC-TTTTGTGCCTTGCCAGTGGACAGAGGGACCAAGCTAATCA-TTCACC  947
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTTTTTGTGCCTTGCCAGTGGACAGAGGGACCAAGCTAATCATTTCACC  950

seq1  AATAC-TTGACTGTCTAGATTCTGTTCCAAAACATAGATCCTTTAAA-TT  995
      ||||| ||||||||||||||||||||||||||||||||||||||||| ||
seq2  AATACTTTGACTGTCTAGATTCTGTTCCAAAACATAGATCCTTTAAATTT  1000

seq1  AATTGAACATCTTTATTCTCCTGCTATCTTTCTAGCTAACTATATAACCC  1045
      ||||||||||| ||||||  ||||||||||||||||| ||||||| ||||
seq2  AATTGAACATC-TTATTCCTCTGCTATCTTTCTAGCT-ACTATAT-ACCC  1047

seq1  TAACCTCATCCATTCTTACCTCCAACCTCTGAGCCTTAATAAAGGTCTGA  1095
      ||||||||| ||||||||||||  || | |||| ||||||||| ||||||
seq2  TAACCTCAT-CATTCTTACCTC--ACTTTTGAG-CTTAATAAA-GTCTGA  1092

seq1  TACTTTTTGTTAATATTTTAATTTAAAGGGAAATCATGAGTTATATGCAT  1145
      ||| ||||||||||||||||||||||| |||| ||||||||||  |||||
seq2  TAC-TTTTGTTAATATTTTAATTTAAA-GGAAGTCATGAGTTAATTGCAT  1140

seq1  ATGT  1149
      ||||
seq2  ATGT  1144

seq1: chr13_67277483_67278655
seq2: B6Ng01-225I08.g_67_1233 (reverse)

seq1  GAGAA-TTTCAGCCACCTTGTGTTCCTGGGTGAGCATTGTA-TCTAT-AG  47
      ||||| ||||||||||| || | | ||| |||||   |||| ||||| ||
seq2  GAGAATTTTCAGCCACC-TGAGGTTCTGAGTGAGGCATGTATTCTATAAG  49

seq1  AGAATTCCTATCTCACCCCTACCATGAACATG-TAGCTCTCCCGCTTTGT  96
      ||||| |   ||||| ||||| |||| ||||| |||||||||||| ||||
seq2  AGAATACAATTCTCA-CCCTA-CATG-ACATGTTAGCTCTCCCGC-TTGT  95

seq1  ACAATA-TCTCATGGAAGTATTTCAACAACGAGTTTCATATCCATCATTT  145
      |||||| ||||||||||||||||| |||||||| ||||||||||||| ||
seq2  ACAATATTCTCATGGAAGTATTTC-ACAACGAG-TTCATATCCATCA-TT  142

seq1  GAAGAAAAATTAGGGAGGTTACTGTACAGCTAAGAAACATGTCATTATTT  195
      ||   |||||  ||||||||||||||||||||||||||||||||||| ||
seq2  GA--GAAAATAGGGGAGGTTACTGTACAGCTAAGAAACATGTCATTA-TT  189

seq1  TTCCTTGCTGTGTTTGAAATGTCTGTGTTGGAAGCATGCCT-CCTTTAGT  244
      |||||||||||||||| ||||||||||| |||||||||||| ||||||||
seq2  TTCCTTGCTGTGTTTG-AATGTCTGTGTGGGAAGCATGCCTCCCTTTAGT  238

seq1  CTTCTGAGACTGTTAGAAATGCACCCACATCAGGCGTGGACCACATTTGT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGACTGTTAGAAATGCACCCACATCAGGCGTGGACCACATTTGT  288

seq1  TAATGAAATTGTTTCTCCATTCAGTTTCATGTTTTCCCTCTAAAGAAACT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAATTGTTTCTCCATTCAGTTTCATGTTTTCCCTCTAAAGAAACT  338

seq1  CAGAATCAGGATATTGTACATTCCTTTCTGTATTTTACTGTCCATGTCAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCAGGATATTGTACATTCCTTTCTGTATTTTACTGTCCATGTCAG  388

seq1  AAACCCTTGAAGGAACTAATTGTCTGCAGTTATTTATTGTATCATGTCTT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTGAAGGAACTAATTGTCTGCAGTTATTTATTGTATCATGTCTT  438

seq1  TCCTTATAAACACTGTACTGAAAGAGAGAGTAAAAGAACACTTAAGCAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATAAACACTGTACTGAAAGAGAGAGTAAAAGAACACTTAAGCAAT  488

seq1  CTTAACTTCTTGTTCTCCAACCAGGTCTTGCTGTCTCTAAGCCATTCCTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTTCTTGTTCTCCAACCAGGTCTTGCTGTCTCTAAGCCATTCCTG  538

seq1  GTGACATTTCTGGAGCAAATACAAGGGCCTTGGGACATGAAGAGACAAGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATTTCTGGAGCAAATACAAGGGCCTTGGGACATGAAGAGACAAGG  588

seq1  AACGGCCCCTGTGTACCCAGGTATGTAGGAAAGTGGGCGTCAGGGGACAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCCCCTGTGTACCCAGGTATGTAGGAAAGTGGGCGTCAGGGGACAG  638

seq1  AGTTCAAGTCCAAAGATCCAACAGCCAGGCTTTCCCATGTGCCTTGAAAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAGTCCAAAGATCCAACAGCCAGGCTTTCCCATGTGCCTTGAAAT  688

seq1  AATGTATTATGAACATCATTCTTTAGGTCTCTCCTTCACATCTCTCAGAC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTATGAACATCATTCTTTAGGTCTCTCCTTCACATCTCTCAGAC  738

seq1  ATTTATGGTGGCTTAAGTCTCTTAGGATTTATATTTTGCAAACAGTGTGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGTGGCTTAAGTCTCTTAGGATTTATATTTTGCAAACAGTGTGC  788

seq1  CCTGTGTATGTTTTTACATGGACTTCCAAGATTTTTCTTGTTGCTGAGTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTATGTTTTTACATGGACTTCCAAGATTTTTCTTGTTGCTGAGTC  838

seq1  TCTATTGTAATGTAACACTCGGGGAAATGCAACTGAGTATTGGTCAGACC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTAATGTAACACTCGGGGAAATGCAACTGAGTATTGGTCAGACC  888

seq1  GGGAGTCACTTTTTTGATGGTGTTAAGGCAGACTTGTGCCAGAAAGCTCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCACTTTTTTGATGGTGTTAAGGCAGACTTGTGCCAGAAAGCTCT  938

seq1  CATACTGAAGTGAGCATGTCTTGGTTAATAAAATCAATGATATGTTCCCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGAAGTGAGCATGTCTTGGTTAATAAAATCAATGATATGTTCCCA  988

seq1  TGACACAGAGGCAGGCAGAAGCAGGGTGCTCAACAATTTCAGTTCTGTTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACAGAGGCAGGCAGAAGCAGGGTGCTCAACAATTTCAGTTCTGTTG  1038

seq1  ATTAGGACAAATTGGGCTGGGGAGCCGTTGGATAAATTCAGACTAACAGG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGACAAATTGGGCTGGGGAGCCGTTGGATAAATTCAGACTAACAGG  1088

seq1  AGTCCCTTTGGACAGTTCATTTCTCACTGATCTTAGGTAGCATCTGTCGA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCTTTGGACAGTTCATTTCTCACTGATCTTAGGTAGCATCTGTCGA  1138

seq1  ATATTGTCTCACAGTCTGCTGAGGAATTC  1173
      |||||||||||||||||||||||||||||
seq2  ATATTGTCTCACAGTCTGCTGAGGAATTC  1167