BAC Information

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BAC

Clone NameB6Ng01-225K19
Chromosome13 (Build37)
Map Location 86,714,759 - 86,715,860
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225K19.bB6Ng01-225K19.g
ACCGA039809GA039810
length1,2161,094
definitionB6Ng01-225K19.b B6Ng01-225K19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagttctataccctgtttttggttgtgttgttttggat
ttttttggtgataaacttcttgagttcttcatatattttggatattagtt
ctcaatcagatgtgtggttagtgaaaaatttttttccaatctgtaggtta
ccaatttgtcttattgactatgtcctttgccttccagaagctttccagtt
tcatgagatgctctttatcaattctttatcttagagcatgagccattgga
attctgtttaagaaattttcccctgtgccaataagttcgaggcttttccc
tactttcttttctattagattcagtgtatctggttttatgttgaggtcct
tgatcccctgggacttgagcattgtacatggtgacaaatatggttttatt
ttcattcttctatgtacacacagccagttagatgagcaccatttattgaa
gatgccttctgtctctgtaccaataccatgcagttttgtcattattgctc
tgtagtagcgcttgaggtccaggatagtgattcacccagctgttctttta
ttgttaataatatttttctttatcaggagttttttgcctttccagatgat
tttgaaaattgctctttccattctttgaagaattgtgttgggattttgaa
agggcattgaatttataggttgcattgaatttatagattgcgagaaagtg
gacatccttgtcttgtaccttattttagtgggattgcttcaattaaaagt
aaattgcttttattgtgtttaggtttgggccttgaatttcttatttcttc
aatacttttaacatgaatggctgttgtattttttcaaatgctttttctcc
atctaaggacataaacatgtgattcttttttctttaagcttgttaatatc
ttgtattatattcctggattttgatatattaaaccaaccttgcatccctg
gaagcctaattgatcatggtgaatgatggttttaaggtttggattcagtt
tgtaagaaatttatgagtatttttgctttgatagtcatatgtaagaatgg
tctaatagttctctatttttgttgggttccttgtgtgatttagtatcaag
aaattgtggctcatgattgatatatatgatccttggttttaatttatgat
attttgaggactggatcaggcttctgtagtccgcaaattctgcactaagg
tctacgtgtgcgactg
gaattctttttcttttcctttttaaatttggacccttcttgaagtaggaa
taagaaacacagccctgaaaaccaaaggtgattgaaactatacctaagtc
aaatagtcatgaaaatctagaggtcaactctttgttttaaaataatcata
tgtagttttattaatacatattcatttgaacttttatgtatatttatcat
tattttagtgtataaaactagcatatcaaacaagaaaaaagtctagcaat
tagtttcaaatctcagatatcattataatatactacttctcaccagatct
tcatagtattcttcacagtactgttgcagtttttaaggaataatgtgaca
tacttatgaatcattatacaaatggttccatggtgggtttatgcatagac
cttcataaaagtaatattcattgcaaaaacacttcctctaggttttcttt
tagagaatgttaagacttactataaagtgagggaaggtcctatttgccat
taataatttcataagtccttatctgaaatctaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaagagctagtatcattgacgctaaagaagcaataatgatac
agaatcaatcccagagccattgctgccttttattctcatcagctttgttc
aagcttagggataattgaagcttatatatgatgctagggaggatgacaat
attcacaatattgatcctacattcccaaaaagattgaatgattttctatc
ttccgttatcttgttcagtctcttacttcaaagttgtaaaattttgatag
tgtgagtcctatgatatattagtgcaagagagatttattttattcttttt
ttcttttttttattacatattttcctcaattacatttcccatgctatccc
agaagtcccgcataccctttgcccccccaccccacctattccgatttttt
ggccctgcattcccctgtactggggaatataaagtttgcctgtcatgggc
cttctctttttcagtgatgctgactaggtcatcttttgatacatatgcag
ctagagtcagagctcaggtactgtagtcatatggtctactacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86714759_86715860
seq2: B6Ng01-225K19.g_64_1157

seq1  GAATTCTTTTTCTTTTCCTTTTTAAATTTGGACCCTTCTTGAAGTAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTCTTTTCCTTTTTAAATTTGGACCCTTCTTGAAGTAGGAA  50

seq1  TAAGAAACACAGCCCTGAAAACCAAAGGTGATTGAAACTATACCTAAGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACACAGCCCTGAAAACCAAAGGTGATTGAAACTATACCTAAGTC  100

seq1  AAATAGTCATGAAAATCTAGAGGTCAACTCTTTGTTTTAAAATAATCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTCATGAAAATCTAGAGGTCAACTCTTTGTTTTAAAATAATCATA  150

seq1  TGTAGTTTTATTAATACATATTCATTTGAACTTTTATGTATATTTATCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTTTATTAATACATATTCATTTGAACTTTTATGTATATTTATCAT  200

seq1  TATTTTAGTGTATAAAACTAGCATATCAAACAAGAAAAAAGTCTAGCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAGTGTATAAAACTAGCATATCAAACAAGAAAAAAGTCTAGCAAT  250

seq1  TAGTTTCAAATCTCAGATATCATTATAATATACTACTTCTCACCAGATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCAAATCTCAGATATCATTATAATATACTACTTCTCACCAGATCT  300

seq1  TCATAGTATTCTTCACAGTACTGTTGCAGTTTTTAAGGAATAATGTGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTATTCTTCACAGTACTGTTGCAGTTTTTAAGGAATAATGTGACA  350

seq1  TACTTATGAATCATTATACAAATGGTTCCATGGTGGGTTTATGCATAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTATGAATCATTATACAAATGGTTCCATGGTGGGTTTATGCATAGAC  400

seq1  CTTCATAAAAGTAATATTCATTGCAAAAACACTTCCTCTAGGTTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAAAGTAATATTCATTGCAAAAACACTTCCTCTAGGTTTTCTTT  450

seq1  TAGAGAATGTTAAGACTTACTATAAAGTGAGGGAAGGTCCTATTTGCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAATGTTAAGACTTACTATAAAGTGAGGGAAGGTCCTATTTGCCAT  500

seq1  TAATAATTTCATAAGTCCTTATCTGAAATCTAAAAAAAAAAAAAAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTTCATAAGTCCTTATCTGAAATCTAAAAAAAAAAAAAAAAAAA  550

seq1  AAAAAAAAAAAGAGCTAGTATCATTGACGCTAAAGAAGCAATAATGATAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAGAGCTAGTATCATTGACGCTAAAGAAGCAATAATGATAC  600

seq1  AGAATCAATCCCAGAGCCATTGCTGCCTTTTATTCTCATCAGCTTTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCAATCCCAGAGCCATTGCTGCCTTTTATTCTCATCAGCTTTGTTC  650

seq1  AAGCTTAGGGATAATTGAAGCTTATATATGATGCTAGGGAGGATGACAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAGGGATAATTGAAGCTTATATATGATGCTAGGGAGGATGACAAT  700

seq1  ATTCACAATATTGATCCTACATTCCCAAAAAGATTGAATGATTTTCTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAATATTGATCCTACATTCCCAAAAAGATTGAATGATTTTCTATC  750

seq1  TTCCGTTATCTTGTTCAGTCTCTTACTTCAAAGTTGTAAAATTTTGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGTTATCTTGTTCAGTCTCTTACTTCAAAGTTGTAAAATTTTGATAG  800

seq1  TGTGAGTCCTATGATATATTAGTGCAAGAGAGATTTATTTTATTCTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGTCCTATGATATATTAGTGCAAGAGAGATTTATTTTATTCTTTTT  850

seq1  TTCTTTTTTTTATTACATATTTTCCTCAATTACATTTCCAATGCTATCCC  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTCTTTTTTTTATTACATATTTTCCTCAATTACATTTCCCATGCTATCCC  900

seq1  AGAAGTCCCGCATACCCTT--GCCCCCCACCCCACCTATTCCGATTTTTT  948
      |||||||||||||||||||   ||||||||||||||||||||||||||||
seq2  AGAAGTCCCGCATACCCTTTGCCCCCCCACCCCACCTATTCCGATTTTTT  950

seq1  GGCCCTGGCATTCCCCTGTACTGGGGAATATAAAGTTTGCCTGTCCAATG  998
      |||||| ||||||||||||||||||||||||||||||||||||||  |||
seq2  GGCCCT-GCATTCCCCTGTACTGGGGAATATAAAGTTTGCCTGTC--ATG  997

seq1  GGCC-TCTC-TTTTCAGTGATGGCTGACTAGGTCATCTTTTGATACATAT  1046
      |||| |||| ||||||||||| ||||||||||||||||||||||||||||
seq2  GGCCTTCTCTTTTTCAGTGAT-GCTGACTAGGTCATCTTTTGATACATAT  1046

seq1  GCAGCTAGAGTCAAGAGCTTCGGGGTACTGGTTAGTTCATAATGGTCTAC  1096
      |||||||||||| ||||||    |||||||  ||| |||| |||||||| 
seq2  GCAGCTAGAGTC-AGAGCT--CAGGTACTG--TAG-TCAT-ATGGTCTA-  1088

seq1  CTACAG  1102
      ||||||
seq2  CTACAG  1094