BAC Information

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BAC

Clone NameB6Ng01-231L18
Chromosome13 (Build37)
Map Location 63,033,406 - 63,034,465
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366, LOC380850, LOC630951, Fbp2, Fbp1
Downstream geneLOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231L18.bB6Ng01-231L18.g
ACCGA044250GA044251
length1,0641,200
definitionB6Ng01-231L18.b B6Ng01-231L18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcctgacttcaaaagtgagtgaaaaaattactgctctctctg
caatgcaaatggctaccctccaaatcagatagctttttttgacggtggaa
agttgtaacaaaacaagatgaaggcacacaagaagccatgtcagaagtta
gaatgaataaagaatcatgtgcaatggggctagagagactaaactgatgt
tgagaatgaatactggtcttgcagaggacccaagttcaattcccagcatt
cacattacacagctcacaactgcttgtaactctaactccagcaatctgat
tctctcttttagcttcctcagtaacagcccacatgttacatatgtaagta
aaaatgtgtacaagaatggagtctactggtcaaaatgaatttatcactta
actttattaaagacttggatcagaattaaacagagtgctttaaggcatct
gtgacacaccatatcaaattaggattgtctccggtctgttactcagaatg
atccgcctgcatggacaaagaataattaatgccagagttgattgaaatag
taatctgaggggtctcgggtgacagctcaattagtgaagtgcttgtcttg
caagcttgaggacatgagctcaacctgcttgaaccggctgccatggtgtg
tgcctgtaattccagtgctgtggagacagagacaggcagattcctgggga
caagtgacagccaacttaacctatgcagttactgaggggccctgtctcca
gaaaacagggtggatggcacaattgaagttgtcctctggcctccttaagc
atgtacacatgcctgtacatacatcacacctaaacatgcacacatagccg
ggcgtggtggcgcatgcctttaattccagcactcaggaggcagaaggcag
gaggattttccgattcaaggccagcctgttctcaaagtgaggtcccagga
tatccagagcctttccaagaaaccctgtctcgaaaaatccaaaaaatgaa
atacccaaaacaaaaacatgctacactttgtatacaccacaatttgccag
agttccttgtgttt
gaattctcacctgaggaatactgaatggctgagaagcacctgaaaaaaat
gttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccatctcataccagtcagaatgggtaagatcaaaaactcaggtgacag
cagatgctggcgaggatgtggaaaaagaggaacactcctccattgttggt
gggattgcaagcttgaacaaccactctggaaatcagtttggtagttgctc
agaaaattggacatagtaccagaagatccagcaatacctctcctgggcat
atacccagaagatgctccaacatgtaataaggatacctcctctactatgt
tcatagtagccttatttataatagccagaagcagaaagaacccagatgtc
cctcaacagaggaatggatacagaaaatgtggtacatttacacaatggag
tactatttagctattaaaaacaatgaatttatgaaattcttaggcaaatg
gatgtatttggaggatatcatcctgagtgaggtaaaccaatcacaaaaga
actcacttgatatgcactcactgataagtggttattagcccagaaactta
gaatacccaagatacaatttgcaaaacacaagaaaatcaagaagaaggaa
gaccaacgtgtggatacttcattcctccttagaatagagaacaaaatacc
catgaaaagagttacagagacaaagtttggagttgagacgaaaggatgga
ccacccagagactgccccacttggggatccatcccataatcagccaccaa
acgcagacactatggcatatgccagcatgattttgctgaaaggaccctga
tatagctgtctcttgtgaggctaggccagtgcctggcaaaatacagaagt
agatgctcatagtcatctactggatggaacacagggccctccaatggagg
agctaggagaaagtacccaaagagctgaaggggtctggcaaccctatagt
ggaacaacaataatgaactaccagtacctcagagctcggtgtctcttagc
tgccatatgtagcagaaagatggccctagtcgtcatcactgaaagaagag
gcccccttagtctgcacctttattgcccccgttaccgggatgccagacag
aatggagttggctggctagggaacctggcgcattctattatttacatgag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_63033406_63034465
seq2: B6Ng01-231L18.b_46_1109

seq1  GAATTCTCTCCTGACTTCAAAAGTGAGTGAAAAAATTACTGCTCTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTGACTTCAAAAGTGAGTGAAAAAATTACTGCTCTCTCTG  50

seq1  CAATGCAAATGGCTACCCTCCAAATCAGATAGCTTTTTTTGACGGTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAAATGGCTACCCTCCAAATCAGATAGCTTTTTTTGACGGTGGAA  100

seq1  AGTTGTAACAAAACAAGATGAAGGCACACAAGAAGCCATGTCAGAAGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAACAAAACAAGATGAAGGCACACAAGAAGCCATGTCAGAAGTTA  150

seq1  GAATGAATAAAGAATCATGTGCAATGGGGCTAGAGAGACTAAACTGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAATAAAGAATCATGTGCAATGGGGCTAGAGAGACTAAACTGATGT  200

seq1  TGAGAATGAATACTGGTCTTGCAGAGGACCCAAGTTCAATTCCCAGCATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGAATACTGGTCTTGCAGAGGACCCAAGTTCAATTCCCAGCATT  250

seq1  CACATTACACAGCTCACAACTGCTTGTAACTCTAACTCCAGCAATCTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTACACAGCTCACAACTGCTTGTAACTCTAACTCCAGCAATCTGAT  300

seq1  TCTCTCTTTTAGCTTCCTCAGTAACAGCCCACATGTTACATATGTAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTTTTAGCTTCCTCAGTAACAGCCCACATGTTACATATGTAAGTA  350

seq1  AAAATGTGTACAAGAATGGAGTCTACTGGTCAAAATGAATTTATCACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGTACAAGAATGGAGTCTACTGGTCAAAATGAATTTATCACTTA  400

seq1  ACTTTATTAAAGACTTGGATCAGAATTAAACAGAGTGCTTTAAGGCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTAAAGACTTGGATCAGAATTAAACAGAGTGCTTTAAGGCATCT  450

seq1  GTGACACACCATATCAAATTAGGATTGTCTCCGGTCTGTTACTCAGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACACACCATATCAAATTAGGATTGTCTCCGGTCTGTTACTCAGAATG  500

seq1  ATCCGCCTGCATGGACAAAGAATAATTAATGCCAGAGTTGATTGAAATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGCCTGCATGGACAAAGAATAATTAATGCCAGAGTTGATTGAAATAG  550

seq1  TAATCTGAGGGGTCTCGGGTGACAGCTCAATTAGTGAAGTGCTTGTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAGGGGTCTCGGGTGACAGCTCAATTAGTGAAGTGCTTGTCTTG  600

seq1  CAAGCTTGAGGACATGAGCTCAACCTGCTTGAACCGGCTGCCATGGTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTGAGGACATGAGCTCAACCTGCTTGAACCGGCTGCCATGGTGTG  650

seq1  TGCCTGTAATTCCAGTGCTGTGGAGACAGAGACAGGCAGATTCCTGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTAATTCCAGTGCTGTGGAGACAGAGACAGGCAGATTCCTGGGGA  700

seq1  CAAGTGACAGCCAACTTAACCTATGCAGTTACTGAGGGGCCCTGTCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACAGCCAACTTAACCTATGCAGTTACTGAGGGGCCCTGTCTCCA  750

seq1  GAAAACAGGGTGGATGGCACAATTGAAGTTGTCCTCTGGCCTCCTTAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACAGGGTGGATGGCACAATTGAAGTTGTCCTCTGGCCTCCTTAAGC  800

seq1  ATGTACACATGCCTGTACATACATCACACCTAAACATGCACACATAGCCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACACATGCCTGTACATACATCACACCTAAACATGCACACATAGCCG  850

seq1  GGCGTGGTGGCGCACGCCTTTAATCCCAGCACTCAGGAGGCAG-AGGCAG  899
      |||||||||||||| ||||||||| |||||||||||||||||| ||||||
seq2  GGCGTGGTGGCGCATGCCTTTAATTCCAGCACTCAGGAGGCAGAAGGCAG  900

seq1  GTGGA-TTTCCGAGTTCAAGGCCAGCCTGGTCTACAAAGTGA-GTTCCAG  947
      | ||| ||||||| ||||||||||||||| ||| |||||||| || ||||
seq2  GAGGATTTTCCGA-TTCAAGGCCAGCCTGTTCT-CAAAGTGAGGTCCCAG  948

seq1  GATATCCAGAGCTATACAGAGAAACCCTGTCTCGAAAAA-CCAAAAAAAG  996
      ||||||||||||  | |  |||||||||||||||||||| |||||||| |
seq2  GATATCCAGAGCCTTTCCAAGAAACCCTGTCTCGAAAAATCCAAAAAATG  998

seq1  AAA-ACCCAAAACAAAAACATGC-ACACATATGTATACA-CACAATTAGC  1043
      ||| ||||||||||||||||||| |||| | |||||||| ||||||| ||
seq2  AAATACCCAAAACAAAAACATGCTACAC-TTTGTATACACCACAATTTGC  1047

seq1  CAGAGTTCTTTGTGTTT  1060
      |||||||| ||||||||
seq2  CAGAGTTCCTTGTGTTT  1064