BAC Information

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BAC

Clone NameB6Ng01-232C23
Chromosome13 (Build37)
Map Location 80,871,561 - 80,872,529
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98, Lysmd3, Polr3g, 2900024O10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232C23.bB6Ng01-232C23.g
ACCGA044585GA044586
length9731,208
definitionB6Ng01-232C23.b B6Ng01-232C23.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttaaggaaggtgggacaggaatgctgaaccaagcaccaggct
agtcactacattgacagtgcagtaaggggaccagtaaaccctgatgccag
tttctccatacttttcaaggtgcagctgtgctgggctgagagaacatgga
gtatgtgcaagcactagtaagtgggtcaaagagaaatattggaaaatgcc
tgactctccatttctccttccctggcatcttcagtttacttaaattcatc
ttaaatatcagtgtgtttttattcccagtgagttgtcctaaattagactc
taaaaagagaattctaaatgagagagagttctaagtggaaatcaaaacaa
cctgtttctcctcatgagtgtccccttgaacactggctaattttgattat
tgaacgcttatttctctattgttctgctatcatctccattgagatgcctc
agcacatgttttgatttgctctcacattctgatttagaaaaacttccaag
gttctgagccaccaaatatcccacatgacaaatcacaagtgaaacataaa
aaagtcaagtttcaaacacatggcatccttctgcctcaatatgtcatagc
atagcatattcttttcatagatctttgcttaagaatgcacttgtatttct
gacaatgtttttctcatgtcaacataagccatttagaggagcactggagg
accatggaaatgccttctcagttagatggaagtttttttcaactttattg
attgtgaattttcacatcatgcaatccagtcccacttactcatctctcca
tcccttcatatccaccctatgcccttacaacctctctatcaaaaacaaat
attaaaaaaataaaataaatcaaaaaggcatatcttagaaagcatcattc
tggaagctgtagtgtgctgcagtgtgtgccacagtatacctttttgtcca
cacatttttcacttgcaaatatt
gaattctctgtttagctctacactcctttttttggaggttagcttcttga
gttctttatatattttggatattagctgccgggtttgtgaagattttttt
tttccaatctgtaggttatcaatatgtcctgaattgactgtgtcttttga
cttccagaagctttccagtttcatgaggtctcatttataaattcttgatc
ttagagctcaagccattggagttctgtttaggaaatttttccctgtgcca
atgagttcaaagctctttctcactttctcgtctattagatttagcctatc
tcattttatgttgaggtccttgatccacttggacttgcgctttgtgcact
gtgacaaaaaatggatctattttcattgttctacatacagacagccagtt
ataacagcaccatttattgaagatgctttcttttttccagcatatatttt
tggcttctttgacagagatcaagtgtccataagtatgtggttttatttct
ggttcttcaggtctattccattgattgaactgcctgtctctgcaccaata
ccatgcagtttttctcactgttgctttgtagtacagtttgaggtcaggaa
tgtgattcccctagaagatcttttgttgtcaagaattgttttcactatcc
tgttttatttttttttccatatgaacttcaaaatcgctctttccatgtct
gtgaagaattgtgttggaatttggaaggggatatcattgattgtgtagat
tgcttttggttggatagtcatttttactattttaatcctaccaatcaatg
agcacgggagatctctcaatttttctaaggtcttctttcgatttcttttc
ttgtgagacttgaagttactgttatacagatttttcagtttgtttagagc
tacacccaaaatattttatattaatttggtgactattgcaaaggttattt
gtttcccttattttccttctcagcccatttataaatttatataaaaggaa
aggctactgatttggtttgaagttaattttaatataccaggccacttttg
cctgaagttgtttatcagcctgcagaaatttctctggtagaaatttttga
gtttgcctaaggtttactttttttttaaagattaatttaatttgttaata
tagttccacgtaacgttcatcaaacactctaaagagaagtggtgtgtatg
ctgtagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80871561_80872529
seq2: B6Ng01-232C23.b_33_1005

seq1  GAATTCTTTTAAGGAAGGTGGGACAGGAATGCTGAACCAAGCACCAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAGGAAGGTGGGACAGGAATGCTGAACCAAGCACCAGGCT  50

seq1  AGTCACTACATTGACAGTGCAGTAAGGGGACCAGTAAACCCTGATGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTACATTGACAGTGCAGTAAGGGGACCAGTAAACCCTGATGCCAG  100

seq1  TTTCTCCATACTTTTCAAGGTGCAGCTGTGCTGGGCTGAGAGAACATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCATACTTTTCAAGGTGCAGCTGTGCTGGGCTGAGAGAACATGGA  150

seq1  GTATGTGCAAGCACTAGTAAGTGGGTCAAAGAGAAATATTGGAAAATGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGCAAGCACTAGTAAGTGGGTCAAAGAGAAATATTGGAAAATGCC  200

seq1  TGACTCTCCATTTCTCCTTCCCTGGCATCTTCAGTTTACTTAAATTCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCCATTTCTCCTTCCCTGGCATCTTCAGTTTACTTAAATTCATC  250

seq1  TTAAATATCAGTGTGTTTTTATTCCCAGTGAGTTGTCCTAAATTAGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATCAGTGTGTTTTTATTCCCAGTGAGTTGTCCTAAATTAGACTC  300

seq1  TAAAAAGAGAATTCTAAATGAGAGAGAGTTCTAAGTGGAAATCAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGAATTCTAAATGAGAGAGAGTTCTAAGTGGAAATCAAAACAA  350

seq1  CCTGTTTCTCCTCATGAGTGTCCCCTTGAACACTGGCTAATTTTGATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCTCCTCATGAGTGTCCCCTTGAACACTGGCTAATTTTGATTAT  400

seq1  TGAACGCTTATTTCTCTATTGTTCTGCTATCATCTCCATTGAGATGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGCTTATTTCTCTATTGTTCTGCTATCATCTCCATTGAGATGCCTC  450

seq1  AGCACATGTTTTGATTTGCTCTCACATTCTGATTTAGAAAAACTTCCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGTTTTGATTTGCTCTCACATTCTGATTTAGAAAAACTTCCAAG  500

seq1  GTTCTGAGCCACCAAATATCCCACATGACAAATCACAAGTGAAACATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGCCACCAAATATCCCACATGACAAATCACAAGTGAAACATAAA  550

seq1  AAAGTCAAGTTTCAAACACATGGCATCCTTCTGCCTCAATATGTCATAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAAGTTTCAAACACATGGCATCCTTCTGCCTCAATATGTCATAGC  600

seq1  ATAGCATATTCTTTTCATAGATCTTTGCTTAAGAATGCACTTGTATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATATTCTTTTCATAGATCTTTGCTTAAGAATGCACTTGTATTTCT  650

seq1  GACAATG-TTTTCTCATGTCAACATAAGCCA-TTAGAGGAGCACTGGAGG  698
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  GACAATGTTTTTCTCATGTCAACATAAGCCATTTAGAGGAGCACTGGAGG  700

seq1  ACCATGGAAATGCCTTCTCAGTTAGATGGAAGTTTTTTTCAACTTTATTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGAAATGCCTTCTCAGTTAGATGGAAGTTTTTTTCAACTTTATTG  750

seq1  ATTGTGAA-TTTCACATCATGCAATCCAGTCCCACTTACTCATCTCTCCA  797
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGAATTTTCACATCATGCAATCCAGTCCCACTTACTCATCTCTCCA  800

seq1  TCCCTTCATATCCACCCTATGCCCTTACAACCTCTCCATCAAAAACAAA-  846
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TCCCTTCATATCCACCCTATGCCCTTACAACCTCTCTATCAAAAACAAAT  850

seq1  ATTAAAAAAATAAAATAAACAAAAAAGGCATATCATAGAAAGCATCATCA  896
      |||||||||||||||||||  ||||||||||||| |||||||||||||  
seq2  ATTAAAAAAATAAAATAAATCAAAAAGGCATATCTTAGAAAGCATCATTC  900

seq1  TGGAAGCTGTAGTGTGCTGCAGTGTGTGCCACAGTATACCTTTTTGTCCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTGTAGTGTGCTGCAGTGTGTGCCACAGTATACCTTTTTGTCCA  950

seq1  CACATTTTTCACTTGCAAATATT  969
      |||||||||||||||||||||||
seq2  CACATTTTTCACTTGCAAATATT  973