BAC Information

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BAC

Clone NameB6Ng01-232M18
Chromosome13 (Build37)
Map Location 76,091,506 - 76,092,389
singlet/doubletsinglet
Overlap geneLOC622313
Upstream genePcsk1, LOC672443, LOC666764, LOC100042606, LOC100042986, Ell2, LOC666786, Glrx, Rhobtb3, LOC666553
Downstream geneSpata9, Rfesd, LOC100043008, Gpr150, Arsk, AK129128, Gm276, Mctp1, LOC666603, EG666607
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232M18.bB6Ng01-232M18.g
ACCGA045040GA045041
length1,012890
definitionB6Ng01-232M18.b B6Ng01-232M18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactgaaccagaaaagaaattcctcccgacacataata
atcaaaacaacaaatgcactaaataaagataaaatactaaaagccgtaag
ggaaaaaggtcaagtaacatataaaggcaagcctatcagaattacaccag
atttttcaccagagactatgaaagccagaagagcctggacagatgttata
gacactaagagaacacaaatgccagcccaggatactatacacagacaaac
tttcaattaccttagatggagaaacaaaagtattccacgacagaactaaa
ttcacacattatctttccacgaatcctgcccttcaaaggataataacaga
aaaaaaacaatacaaggacagaaaccacgtcctagaaaaagcaagaaggt
aatccctcaacaaacctaaaggaagacagccacaagaacagaatgccaac
tttaacaacaagaataataggaatcaacaattacttttccttaatatctc
ttaatatcaatggactcaactccccaataaaaagacatagactaacagac
cggctacacaaacaagacccaacattttgctgcttacaggaaactcatct
cagagaaaaagataaacactacctcagaatgaaaggctggaaaacaattt
tccaagcaaattgtatgaagaaacaagctggagtagccattctaatatct
aataaaatagacttccaacccaaagtaatcaaaaaagacaaggaggggca
cttcatactcatcaaaggtaaaatcctccaagaggaactctcaattctga
atatctatgctccaaatgcaagggcagccacattcattaaagaaacttta
gtaagctcaaagcacacattgcacctcacacaataatagtgggagacttc
aacataccactttcaccagtgggacagatcatgggaaacagaaactaaac
agggaccacagtgaaactaacagaagttatgaaacaaattggatctgaca
gatatctacaaa
gaattcctgataaggagacttggtgaagacagtctctttccagaggtcgg
gggtcaggtagctgtaagtcttggagatggcatcaaaggtggccttagca
aagttgcccagggtggcagtgcagcctctggctgaagtgtagcagtcatc
tataccggccatcatcaggagcttcttgggcacaggagcagagacaatgc
cagtgcctctgggggcagggatgagacgcaccagcacagagccacagcgg
cctgtcaccttgcatggaacagtgtggggcttgccaatcttgttccccca
gtagcctctccgcacagggactatggaaagcttgccaagatgatggcccc
tcggatggcagtagcaacctccttggagcacttaacaccaagaccaacgt
gaccattgtagtccccaatagcgacaaaagccttgaacctggtccgctgg
ccagcccgagtctgcttctgcactggcatgattttcagaacctcatcctt
tagggacgcacccaggaagaaatcaatgatctcagactccttaatgggca
gggagaacaggtagatctcctccaaggacttgatcttcatgtccttaacc
aggcggcccagcttggtgacggggatccactcctttgtcttcagctttac
ctccacgagccccgcggcctcgaccactgccatggcctcggccacgacca
cggcccctaagaccgctgccgaatcctgtgcggaagccgccgcggcctcc
taaatcctgggccccgggtcctccgggccctcccgctgcaccggcgtcat
ccgccaatttggtgttttcccgaaaaaaaaagaagcagcattcagttact
tcttgagcagtgttttacccaaccttgtgggttgctaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_76091506_76092389
seq2: B6Ng01-232M18.g_70_959 (reverse)

seq1  GGGTAGCAACCCAC-AGGTT-GGTAAAACACTGCTCAAG-AGTAACTGAC  47
      |||||||||||||| ||||| |||||||||||||||||| ||||||||| 
seq2  GGGTAGCAACCCACAAGGTTGGGTAAAACACTGCTCAAGAAGTAACTGAA  50

seq1  TGCTGCTTC-TTCTTCTTCGGGAAAACACCAAA-TGGCGGATGACGCCGG  95
      ||||||||| || || ||||||||||||||||| ||||||||||||||||
seq2  TGCTGCTTCTTTTTTTTTCGGGAAAACACCAAATTGGCGGATGACGCCGG  100

seq1  TGCAGCGGGAGGGCCCGGAGGACCCGGGGGCCCAGGA-TTAGGAGGCCGC  144
      ||||||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  TGCAGCGGGAGGGCCCGGAGGACCC-GGGGCCCAGGATTTAGGAGGCCGC  149

seq1  GGCGGCTTCCGCACAGGATTCGGCAGCGGTCTTAGGGGCCGTGGTCGTGG  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCTTCCGCACAGGATTCGGCAGCGGTCTTAGGGGCCGTGGTCGTGG  199

seq1  CCGAGGCCATGGCCGTGGTCGAGGCCGCGGGGCTCGTGGAGGTAAAGCTG  244
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCGAGGCCATGGCAGTGGTCGAGGCCGCGGGGCTCGTGGAGGTAAAGCTG  249

seq1  AAGAC-AAGGAGTGGATCCCCGTCACCAAGCTGGGCCGCCTGGTTAAGGA  293
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAAGGAGTGGATCCCCGTCACCAAGCTGGGCCGCCTGGTTAAGGA  299

seq1  CATGAAGATCAAGTCCTTGGAGGAGATCTACCTGTTCTCCCTGCCCATTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGATCAAGTCCTTGGAGGAGATCTACCTGTTCTCCCTGCCCATTA  349

seq1  AGGAGTCTGAGATCATTGATTTCTTCCTGGGTGCGTCCCTAAAGGATGAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTCTGAGATCATTGATTTCTTCCTGGGTGCGTCCCTAAAGGATGAG  399

seq1  GTTCTGAAAATCATGCCAGTGCAGAAGCAGACTCGGGCTGGCCAGCGGAC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAAAATCATGCCAGTGCAGAAGCAGACTCGGGCTGGCCAGCGGAC  449

seq1  CAGGTTCAAGGCTTTTGTCGCTATTGGGGACTACAATGGTCACGTTGGTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCAAGGCTTTTGTCGCTATTGGGGACTACAATGGTCACGTTGGTC  499

seq1  TTGGTGTTAAGTGCTCCAAGGAGGTTGCTACTGCCATCCGAGGGGCCATC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTAAGTGCTCCAAGGAGGTTGCTACTGCCATCCGAGGGGCCATC  549

seq1  ATCTTGGCAAGCTTTCCATAGTCCCTGTGCGGAGAGGCTACTGGGGGAAC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGCAAGCTTTCCATAGTCCCTGTGCGGAGAGGCTACTGGGGGAAC  599

seq1  AAGATTGGCAAGCCCCACACTGTTCCATGCAAGGTGACAGGCCGCTGTGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGGCAAGCCCCACACTGTTCCATGCAAGGTGACAGGCCGCTGTGG  649

seq1  CTCTGTGCTGGTGCGTCTCATCCCTGCCCCCAGAGGCACTGGCATTGTCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCTGGTGCGTCTCATCCCTGCCCCCAGAGGCACTGGCATTGTCT  699

seq1  CTGCTCCTGTGCCCAAGAAGCTCCTGATGATGGCCGGTATAGATGACTGC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTGTGCCCAAGAAGCTCCTGATGATGGCCGGTATAGATGACTGC  749

seq1  TACACTTCAGCCAGAGGCTGCACTGCCACCCTGGGCAACTTTGCTAAGGC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTCAGCCAGAGGCTGCACTGCCACCCTGGGCAACTTTGCTAAGGC  799

seq1  CACCTTTGATGCCATCTCCAAGACTTACAGCTACCTGACCCCCGACCTCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGATGCCATCTCCAAGACTTACAGCTACCTGACCCCCGACCTCT  849

seq1  GGAAAGAGACTGTCTTCACCAAGTCTCCTTATCAGGAATTC  884
      |||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGACTGTCTTCACCAAGTCTCCTTATCAGGAATTC  890