BAC Information

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BAC

Clone NameB6Ng01-234L16
Chromosome13 (Build37)
Map Location 116,704,881 - 116,705,922
singlet/doubletsinglet
Overlap genenone
Upstream geneItga2, LOC100040975, Itga1, Pelo, LOC100041023, LOC547402, LOC100041045
Downstream geneEG623174, Isl1, EG668276, Gm280, LOC100041169, Parp8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234L16.b
ACCGA046411
length1,080
definitionB6Ng01-234L16.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcatacagattattggttagtgaggttccagagttctcctaa
acaacacagaccattgccattgctattgctacccactagaatgacaggat
aagaccctattgctgaagacatcacacactaaggctgaagaatatagaaa
aatcaatcttgaactagctgggaaactgctgtgatggttagctttcacaa
ttctgggaggtcttataaaggctgctggagaggaaaatactccaaatttt
ttacccagctctacacctgtacactacaatactggccagacaatcaagat
gtgcccaatagcataaaggtaatatgggataaccaactgctttctgattg
gatttgaggactgttccactttatggccattatgataaccctgatcaaaa
gccagagactggaatgatcataggccaatggacaagtctactattgtttt
gctaaatagacaggaagtattttcaatatgttatattcacagaacttgta
tgctctcacctttgtcagataaactttttgcaatagtgtgcagtggtgag
ggtgctatgaacaaggaaacaattcttcttcctcccagggttgtgccttt
agtaggttttccatgatgcagtggacagaccagtctatgcaatataaaca
gcactacttagtaggttacttaaaaacaataataagtaatataaagttgt
aagaatatgtaaagttttaaatatcaaaagtaaaatgaaatagtgtaagc
aaaaaaaaaaagaaatgaatatattcatgtatgaaactagttaattttat
agttagctaaatgtgcaaaagctaaaacacaaaacaaatggacttaaaaa
gaagtattagatttatgatgcacttttttgctaaaattctttctacatct
tcacactttaccattagttattaagccatattatgaatcaagtatttcta
taagaatgtaggaatgaagctctttacagcccttcactgatgtcatacct
taatacagggtattatatttaccatgattttactaactctctgcttgaaa
tttagcatctgggatttttatcaatttttg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_116704881_116705922
seq2: B6Ng01-234L16.b_86_1128

seq1  AGAGTTCTCCTAAACAACACAGACCATTGCCATTGCTATTGCTACCCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTCCTAAACAACACAGACCATTGCCATTGCTATTGCTACCCACT  50

seq1  AGAATGACAGGATAAGACCCTATTGCTGAAGACATCACACACTAAGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACAGGATAAGACCCTATTGCTGAAGACATCACACACTAAGGCTG  100

seq1  AAGAATATAGAAAAATCAATCTTGAACTAGCTGGGAAACTGCTGTGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATAGAAAAATCAATCTTGAACTAGCTGGGAAACTGCTGTGATGG  150

seq1  TTAGCTTTCACAATTCTGGGAGGTCTTATAAAGGCTGCTGGAGAGGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTTTCACAATTCTGGGAGGTCTTATAAAGGCTGCTGGAGAGGAAAA  200

seq1  TACTCCAAATTTTTTACCCAGCTCTACACCTGTACACTACAATACTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCAAATTTTTTACCCAGCTCTACACCTGTACACTACAATACTGGCC  250

seq1  AGACAATCAAGATGTGCCCAATAGCATAAAGGTAATATGGGATAACCAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCAAGATGTGCCCAATAGCATAAAGGTAATATGGGATAACCAAC  300

seq1  TGCTTTCTGATTGGATTTGAGGACTGTTCCACTTTATGGCCATTATGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCTGATTGGATTTGAGGACTGTTCCACTTTATGGCCATTATGATA  350

seq1  ACCCTGATCAAAAGCCAGAGACTGGAATGATCATAGGCCAATGGACAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGATCAAAAGCCAGAGACTGGAATGATCATAGGCCAATGGACAAGT  400

seq1  CTACTATTGTTTTGCTAAATAGACAGGAAGTATTTTCAATATGTTATATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATTGTTTTGCTAAATAGACAGGAAGTATTTTCAATATGTTATATT  450

seq1  CACAGAACTTGTATGCTCTCACCTTTGTCAGATAAACTTTTTGCAATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAACTTGTATGCTCTCACCTTTGTCAGATAAACTTTTTGCAATAGT  500

seq1  GTGCAGTGGTGAGGGTGCTATGAACAAGGAAACAATTCTTCTTCCTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTGGTGAGGGTGCTATGAACAAGGAAACAATTCTTCTTCCTCCCA  550

seq1  GGGTTGTGCCTTTAGTAGGTTTTCCATGATGCAGTGGACAGACCAGTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGTGCCTTTAGTAGGTTTTCCATGATGCAGTGGACAGACCAGTCTA  600

seq1  TGCAATATAAACAGCACTACTTAGTAGGTTACTTAAAAACAATAATAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATAAACAGCACTACTTAGTAGGTTACTTAAAAACAATAATAAGT  650

seq1  AATATAAAGTTGTAAGAATATGTAAAGTTTTAAATATCAAAAGTAAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGTTGTAAGAATATGTAAAGTTTTAAATATCAAAAGTAAAATG  700

seq1  AAATAGTGTAAGCAAAAAAAAAAAGAAATGAATATATTCATGTATGAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTGTAAGCAAAAAAAAAAAGAAATGAATATATTCATGTATGAAAC  750

seq1  TAGTTAATTTTATAGTTAGCTAAATGTGCAAAAGCTAAAACACAAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAATTTTATAGTTAGCTAAATGTGCAAAAGCTAAAACACAAAACAA  800

seq1  ATGGACTTAAAAAGAAGTATTAGATTTATGATGCAC-TTTTTGCTAAAAT  849
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGGACTTAAAAAGAAGTATTAGATTTATGATGCACTTTTTTGCTAAAAT  850

seq1  TCTTTCTACATCTTCACACTTTACCATTAGTTATTAAGCCATATTATGAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTACATCTTCACACTTTACCATTAGTTATTAAGCCATATTATGAA  900

seq1  TCAAGTATTTCTATAAGAATGTAGGAATGAAGCTCTTTACAGCCCTTCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTATTTCTATAAGAATGTAGGAATGAAGCTCTTTACAGCCCTTCAC  950

seq1  TGATGTCAATACCTTAATACAGGGTATTATA-TTACCATGATTTTACTAA  998
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  TGATGTC-ATACCTTAATACAGGGTATTATATTTACCATGATTTTACTAA  999

seq1  CTCTCTGCTTGAAATTTAGCATCTGGATTTTTTATCATTTTTTG  1042
      ||||||||||||||||||||||||||  ||||||||| ||||||
seq2  CTCTCTGCTTGAAATTTAGCATCTGGGATTTTTATCAATTTTTG  1043


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