BAC Information

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BAC

Clone NameB6Ng01-234N21
Chromosome13 (Build37)
Map Location 80,586,971 - 80,588,084
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234N21.bB6Ng01-234N21.g
ACCGA046499GA046500
length1,1121,123
definitionB6Ng01-234N21.b B6Ng01-234N21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagagattagttttaaagttaaaaatagaaatataaggaggggta
ggattatcaatatcttgattggtgagtctctggggatctggtactgctat
gactcagactattcttgcttcacgccaaggaggggtagctcttgacttct
ggacttcaaggttggctaactgtccttttgcaagctaggaaggggtctct
tttacataagcctatggttgtttaggtagctgacttggccagttctgtaa
agtaaaaacagtcctggtctcttgaactgctagtttgcagcctgccatgg
agtcagtctagctcaggccaattcactactttcacctaaagaaaggaagg
gggcataatgaactaaagctagggggaaaaaaccctagaggttaaacttc
aaattctttgttagatggatttttctaatctccttccagctttgttgatt
gcaacatacttttcagccttggagaggttccacactttgttcacagctgt
ccttggcagctagctctcccactgtgctggcatatccaatatcttgggct
ctccaatacaatccaggttgcacctcataagcatcaggcagtgttttctc
tgggcctccgtgcagggactgtcctgtaacatgcctagcctcagcagttt
ccatgaaaagtggaagaaggctcctcaatatcttcactatttctttcatg
actctaaatccataactacgtggctgaagctgcaagttcatttgcttgta
tgggctggacctggcatccttcttgaactatactgccttaagttttctgt
ttgtttggtttttttttttccctaggaaatcccccagactttttcctttc
acaagctgcaggattagctggttgaggttgtcattcccttaattccattt
aacatcaggcttttttttcttaccttctgatctctttgagtacaaaacta
gactccaatattacatttccttcttgctctttttttccctcaatcgtatg
attggaatctctttttctcttctcctctgtaatgtaagaattgtattttt
aaaccttgcctttattaaagtgctgttatatgctagttatgaattgcatg
gtgagaatatat
gaattccaggaagtctttaatttccttctttatttcttctctgtccatgt
tacccttgagtagagaattgttcagtttccatatgtttgtgggttttctg
ttgtatttgttgttattaaagtcttgccttagtccatggtgatctgatag
gatgaatgggattatttcaattttctcagatctgttgaggctttttctgt
gctcaattatattgtcagttttggaaaaggtaccattagttgctaaggag
aaattatatccttttgttttagagcaaaatgttctttgcatatctgttaa
attcatttggttcataatctcttagtttcactgtgtctttgttaagtttc
tgtttcaatgacctgtccatttgtgaaagtaggttgttgaagtctcccac
tgttattatgtgggtttaaatgtatgttttgagctttagttaagtaatta
attaagaatttttaaaatggtgaaatatggcttagcaggtgacattaatt
ctaatatcctgacttcagaccctggaaaaatgggaaagagaactcactcc
cagaagttgtcctttgaccgttacatgcacaccatgacatacattgagtt
tggtgcttttggtcattttcctctgaggtgagtcacgacctgataccatg
taaaaccatgttcttcaaagtgtgcagctacctttttttcattcagtttg
tagagggaatgagcagccttcttggctccgattaggaacctcatagtaag
aggtagtagggctgtttctagtaggtgacttgtctgcagatgctcttgga
gataattaactttcacctttatattagtctctatatctttggatatttta
tgataaaagcttcccccttttctccatggtttaagttcttcaagaactca
attccattttaatatggttaatgtcatgcagcatttcaacattaagattg
aaattgtctccccaaaaaatcaaacttcccagcagcgtctacagagaaag
aagaagatgtaaattacctaccgaatgggatactggccactgaaacagcg
aaatggcagtaccaaaggtaaccagccagattgggacagcccaatacttc
agttggttgggtgttgattgaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80586971_80588084
seq2: B6Ng01-234N21.g_66_1188 (reverse)

seq1  TGTCAATCAACA-CCAACCACCTG-AGTATT-GGCTGTCCCAATCCTGCT  47
      |||||||||||| ||||||| ||| |||||| |||||||||||||  |||
seq2  TGTCAATCAACACCCAACCAACTGAAGTATTGGGCTGTCCCAATCTGGCT  50

seq1  GGTT--CCTTGGTACTGCCATTTCTGCTGTTTCAGTGGCCAGTAT-CCAT  94
      ||||  | |||||||||||||||| |||||||||||||||||||| ||||
seq2  GGTTACCTTTGGTACTGCCATTTC-GCTGTTTCAGTGGCCAGTATCCCAT  99

seq1  TCTGTAGTAATTTTACATCTTC-TCTTTCTCTGTAGACGCTGCTGGG-AG  142
      || ||||  | ||||||||||| |||||||||||||||||||||||| ||
seq2  TCGGTAGGTAATTTACATCTTCTTCTTTCTCTGTAGACGCTGCTGGGAAG  149

seq1  TTTGATTTTTTGGGGAGAC-ATTTCAATCTTTACTGTTGAAATGCTGCAT  191
      ||||||||||||||||||| ||||||||| ||| ||||||||||||||||
seq2  TTTGATTTTTTGGGGAGACAATTTCAATC-TTAATGTTGAAATGCTGCAT  198

seq1  GACATTAACCATATTAAAATGGAATTGAGTTCTTGAAGAACTTAAACCAT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTAACCATATTAAAATGGAATTGAGTTCTTGAAGAACTTAAACCAT  248

seq1  GGAGAAAAGGGGGAAGCTTTTATCATAAAATATCCAAAGATATAGAGACT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGGGGGAAGCTTTTATCATAAAATATCCAAAGATATAGAGACT  298

seq1  AATATAAAGGTG-AAGTTAATTATCTCCAAGAGCATCTGCAGACAAGTCA  340
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGGTGAAAGTTAATTATCTCCAAGAGCATCTGCAGACAAGTCA  348

seq1  CCTACTAGAAACAGCCCTACTACCTCTTACTATGAGGTTCCTAATCGGAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTAGAAACAGCCCTACTACCTCTTACTATGAGGTTCCTAATCGGAG  398

seq1  CCAAGAAGGCTGCTCATTCCCTCTACAAACTGAATG-AAAAAAGGTAGCT  439
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAAGAAGGCTGCTCATTCCCTCTACAAACTGAATGAAAAAAAGGTAGCT  448

seq1  GCACACTTTGAAGAACATGGTTTTACATGGTATCAGGTCGTGACTCACCT  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACTTTGAAGAACATGGTTTTACATGGTATCAGGTCGTGACTCACCT  498

seq1  CAGAGGAAAATGACCAAAAGCACCAAACTCAATGTATGTCATGGTGTGCA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAAAATGACCAAAAGCACCAAACTCAATGTATGTCATGGTGTGCA  548

seq1  TGTAACGGTCAAAGGACAACTTCTGGGAGTGAGTTCTCTTTCCCATTTTT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACGGTCAAAGGACAACTTCTGGGAGTGAGTTCTCTTTCCCATTTTT  598

seq1  CCAGGGTCTGAAGTCAGGATATTAGAATTAATGTCACCTGCTAAGCCATA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTCTGAAGTCAGGATATTAGAATTAATGTCACCTGCTAAGCCATA  648

seq1  TTTCACCATTTTAAAAATTCTTAATTAATTACTTAACTAAAGCTCAAAAC  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACCATTTTAAAAATTCTTAATTAATTACTTAACTAAAGCTCAAAAC  698

seq1  ATACATTTAAACCCACATAATAACAGTGGGAGACTTCAACAACCTACTTT  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTAAACCCACATAATAACAGTGGGAGACTTCAACAACCTACTTT  748

seq1  CACAAATGGACAGGTCATTGAAACAGAAACTTAACAAAGACACAGTGAAA  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGGACAGGTCATTGAAACAGAAACTTAACAAAGACACAGTGAAA  798

seq1  CTAAGAGATTATGAACCAAATGAATTTAACAGATATGCAAAGAACATTTT  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGATTATGAACCAAATGAATTTAACAGATATGCAAAGAACATTTT  848

seq1  GCTCTAAAACAAAAGGATATAATTTCTCCTTAGCAACTAATGGTACCTTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTAAAACAAAAGGATATAATTTCTCCTTAGCAACTAATGGTACCTTT  898

seq1  TCCAAAACTGACAATATAATTGAGCACAGAAAAAGCCTCAACAGATCTGA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACTGACAATATAATTGAGCACAGAAAAAGCCTCAACAGATCTGA  948

seq1  GAAAATTGAAATAATCCCATTCATCCTATCAGATCACCATGGACTAAGGC  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGAAATAATCCCATTCATCCTATCAGATCACCATGGACTAAGGC  998

seq1  AAGACTTTAATAACAACAAATACAACAGAAAACCCACAAACATATGGAAA  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTTAATAACAACAAATACAACAGAAAACCCACAAACATATGGAAA  1048

seq1  CTGAACAATTCTCTACTCAAGGGTAACATGGACAGAGAAGAAATAAAGAA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACAATTCTCTACTCAAGGGTAACATGGACAGAGAAGAAATAAAGAA  1098

seq1  GGAAATTAAAGACTTCCTGGAATTC  1114
      |||||||||||||||||||||||||
seq2  GGAAATTAAAGACTTCCTGGAATTC  1123