MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-237C08
Chromosome	13 (Build37)
Map Location	11,377,003 - 11,378,084
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC100039648
Downstream gene	Zp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100039648 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039648
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	Zp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664793 MGI:3690088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ryr2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20191 MGI:99685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039678 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039678
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Mtr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:238505 MGI:894292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039826 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	Actn2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11472 MGI:109192
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149263870 GeneID:664793 MGI:3690088
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : zona pellucida glycoprotein 4 transcript_id : XM_001481274.1

name	Ryr2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430577 GeneID:20191 MGI:99685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ryanodine receptor 2, cardiac transcript_id : NM_023868.2

name	Mtr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487478 GeneID:238505 MGI:894292
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-methyltetrahydrofolate-homocysteine methyltransferase transcript_id : NM_001081128.1

name	LOC100039826 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149263884 GeneID:100039826
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : similar to DAZ associated protein 2 transcript_id : XM_001473616.1

name	Actn2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:59709448 GeneID:11472 MGI:109192
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actinin alpha 2 transcript_id : NM_033268.3

name	Zp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149263871 GeneID:664793 MGI:3690088
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : zona pellucida glycoprotein 4 protein_id : XP_001481324.1 transl_except : (pos:11614445..11614447,aa:OTHER) transl_except : (pos:11614478..11614480,aa:OTHER) transl_except : (pos:11615001..11615003,aa:OTHER) transl_except : (pos:11615025..11615027,aa:OTHER) transl_except : (pos:11615987..11615989,aa:OTHER) transl_except : (pos:11618261..11618263,aa:OTHER) transl_except : (pos:11618802..11618804,aa:OTHER) transl_except : (pos:11620619..11620621,aa:OTHER) transl_except : (pos:11620640..11620642,aa:OTHER) transl_except : (pos:11620673..11620675,aa:OTHER) transl_except : (pos:11620682..11620684,aa:OTHER) transl_except : (pos:11620697..11620699,aa:OTHER)

name	Ryr2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430578 GeneID:20191 MGI:99685
definition	GO_component : GO:0016021 - integral to membrane [Evidence IC]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0005219 - ryanodine-sensitive calcium-release channel activity [Evidence IDA] GO_process : GO:0006874 - calcium ion homeostasis [Evidence IEA]; GO:0006816 - calcium ion transport [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0031000 - response to caffeine [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : ryanodine receptor type 2; calcium release channel product : ryanodine receptor 2, cardiac protein_id : NP_076357.2

name	Mtr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487479 GeneID:238505 MGI:894292
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0031419 - cobalamin binding [Evidence IEA]; GO:0050897 - cobalt ion binding [Evidence IEA]; GO:0004156 - dihydropteroate synthase activity [Evidence IEA]; GO:0008898 - homocysteine S-methyltransferase activity [Evidence IEA]; GO:0008705 - methionine synthase activity [Evidence IMP] [Evidence IEA]; GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0009396 - folic acid and derivative biosynthesis [Evidence IEA]; GO:0009086 - methionine biosynthesis [Evidence IMP] [Evidence IEA] codon_start : 1 note : Methionine synthase product : 5-methyltetrahydrofolate-homocysteine methyltransferase protein_id : NP_001074597.1

name	LOC100039826 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149263885 GeneID:100039826
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473666.1

name	Actn2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59709449 CCDS:CCDS26239.1 GeneID:11472 MGI:109192
definition	GO_component : GO:0005865 - striated muscle thin filament [Evidence TAS]; GO:0030018 - Z disc [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0051015 - actin filament binding [Evidence IDA] [Evidence TAS]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030674 - protein binding, bridging [Evidence TAS]; GO:0042803 - protein homodimerization activity [Evidence TAS] [Evidence IDA]; GO:0030375 - thyroid hormone receptor coactivator activity [Evidence IDA]; GO:0051370 - ZASP binding [Evidence IDA] GO_process : GO:0006936 - muscle contraction [Evidence IPI] codon_start : 1 exception : mismatches in translation product : actinin alpha 2 protein_id : NP_150371.3

name	LOC100039648 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039648
definition	number : 1 pseudo : _no_value

name	LOC100039648 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039648
definition	number : 2 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 4 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 3 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 2 pseudo : _no_value

name	LOC100039678 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039678
definition	number : 1 pseudo : _no_value

clone name	MSMg01-095O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-267F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-369I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-302A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481H01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-260B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220N14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003E04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-237C08.b	B6Ng01-237C08.g
ACC	GA048186	GA048187
length	1,083	1,155
definition	B6Ng01-237C08.b	B6Ng01-237C08.g
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcatttcccagcacccactcaggtcagacaggtcataagcaactgt ccctccatctccagggcatttgacacttccagcttctgtgacacctgcac tcaagtgcacatgcccacctagacatacacatacacacacatgcacacaa acacatacacatacacatgcacatatccaaacacacagacatatacacat gcagatacatagacacacacacactcatgcacatgcacacacacacacac aaacatatacatgcacgcatacatgtacatatacagacacacacacagaa atgcactcatgcagacatacacacatgcatatacacacacagacacatgc atgaacacatacagagacacacacacacatgcatgcacacacacacacag agctaactcaaaattcatgaaatctagaaaaggaagttggtcttactgag gagcactggtatagctgagaaaggatgccccaggggtgtgaatcctccca gcttccttccttcctttgtatttattttcacagctgacctcttcctgggt gtttgaagaggatttgtggggaactcgccacaaatccgatatccaaatat gaatagagaattgaaagggcaatatctggacctttctgtttttaaaatga ttaatttttcagaaaggttcattgagaccttaaccataaagccagtggcc atgatgatagagctgaagggaaagactgctccatcagaggcagatgagaa ggggacggactgactctgaatactgacttccacactctgaagatcagctt acttccatgggcacagccttttcacctgggaaatatgggaattagaatga accatccaaagggacatttttggttctaatgtttgatgatgatactcagc taaaaacagtggactaattttagatatatgggtggggggttatacctgaa agcaagcaccccccccccattatccacatttttttttcgagacagggttt ctctgtatagcctggctgtctgaaactcactctgtagacaggctgccacg aaactcaaaaatccttcctgctctctggctccc	gaattcagaactcttcagctggggaacaggggtatccgtaagtgcagctt tacaaggtaagtctggtcttgaactttctaacgaaattcaagacagtcta tcagaagtaaagtgggaaatagctttacaaggtaagtctggtcttgaact ttctaacgaaattcaagacagtctatcagaagtaaagtgggaaatagctt tacaaggtatgtttggccttgaactttctctagtgttaggagcctttttg ttccttttcacatgttatcaagcggttaaggcagggctgaaaattctgga tgaaattcagggcaatctatcagaagtaaagcggggagagagagtaggag caaagaggaaatatggcacacaaaataagtatacaggcctttccacgggt cttgaacccgaggaaaagtttaggtcaggtaagaatacctggggagagat tagaaggaaagaaaagaataaagatcaatcagcggaggtttctaggagaa ggagcctatactcatcactagatgagctcaaggagccagttcttagtagt tctgaatcagatgaaaaggctattagggcctggaaggcgctctcccaagc aggtgaagccactggacaactaacaaagatcgtccagagacctcaggagt cattctcagattttatggccaggatgacagaggcagcagagcatattttt ggagattcggagcaagccgcacctctggtagaatagctcatttatgagca agccacacagaagtgcagagcggccatagccccaagaaagaacaaaggtt tacaagactggctcaggtttgtcgggagcttggcggacctctcaccaatg cagcttagcggccgccatcctccaatcccaaaaatgctccatgggcagaa atgaatcacacatagatctgtccaggaacaactagatgttattatggcaa atagctcagctgggatgtgaacaaaagttctgggattgtgcgttacttca tcagtatgagaatttactagggcagcttacctggtcaaaagtctttctca ggttatatgtacgagtgacgcttgattgaacgacttcgagaatggaactc agctcactccacggctgacgtcctgatcaaggattaccaaaggaatctct ctgag
quality values	Open. Hide. 58 33 27 31 58 26 24 54 58 58 58 58 35 26 62 47 54 62 62 36 39 54 62 47 33 62 62 62 47 47 62 49 56 42 46 37 38 43 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 49 44 47 62 62 62 62 59 59 62 62 62 59 62 59 62 62 62 59 62 62 59 62 62 62 59 59 62 54 54 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 54 42 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 58 58 58 58 58 54 49 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 58 58 58 52 58 54 58 54 58 47 58 58 58 54 54 58 54 58 58 58 58 54 46 58 58 58 54 58 54 52 54 58 58 58 58 58 58 58 58 58 58 58 52 58 49 58 42 25 58 58 58 49 58 58 58 58 58 58 49 58 58 53 58 54 50 53 49 58 58 58 53 58 50 58 46 53 54 58 41 32 58 58 58 54 49 58 58 48 49 58 51 58 54 58 50 40 58 53 58 58 49 49 58 48 46 49 58 50 53 49 52 54 58 58 41 33 44 50 58 49 50 54 51 24 58 58 58 47 33 58 58 50 28 54 46 29 41 50 51 32 58 58 58 51 49 41 31 58 41 43 58 51 20 49 49 42 49 54 58 51 39 37 40 50 50 50 50 50 40 49 39 52 50 58 51 50 52 54 34 50 37 54 49 40 49 38 49 46 29 29 53 51 24 53 39 54 32 50 52 52 54 41 21 49 46 49 54 50 37 47 27 40 51 52 51 39 49 32 53 42 40 32 35 10 44 35 35 40 49 32 42 54 28 53 41 29 54 54 52 39 24 20 47 41 24 42 51 38 35 54 53 42 45 51 46 40 42 39 42 53 31 30 32 53 42 40 32 32 37 42 53 53 33 35 53 53 34 34 32 34 40 32 45 30 31 31 31 45 37 31 32 19 33 53 53 51 31 31 31 29 31 22 27 40 51 51 31 31 31 30 30 30 36 51 45 42 51 43 25 32 31 31 47 30 45 26 14 28 34 24 45 34 27 31 33 33 31 31 29 38 31 43 13 46 12 31 47 19 32 24 33 34 48 48 48 27 28 43 24 31 36 30 18 32 29 42 21 46 33 27 31 25 36 32 15 31 37 21 31 30 37 33 33 35 32 30 32 48 46 46 34 37 32 31 31 32 27 16 23 32 32 21 26 48 44 36 32 17 31 18 27 24 6 18 32 48 28 22 34 48 48 48 48 30 11 12 18 18 21 24 36 25 25 32 44 34 24 21 13 23 25 22 20 18 24 24 30 30 36 30 28 12 26 25 19 17 21 21 21 32 19 14 7 28 37 43 40 48 48 37 40 31 17 9 37 22 33 9 21 21 34 25 4 28 13 22 31 22 9 14 7 26 7 14 6 7 3 3 6 23 14 9 12 9 8 9 17 3 32 7 24 19 7 17 7 14 10 7 14 16 24 11 15 13 8 9 13 18 10 19 4 16 7 7 12 18 28 8 13 10 7 5 15 24 28 21 16 5 16 7 7 10 16 9 8 11 4 6 5 4 4 5 4 28 11 11 24 5	Open. Hide. 62 47 56 47 62 47 37 56 62 62 62 59 51 50 32 35 21 24 38 56 62 62 62 62 59 59 51 59 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 56 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 42 62 62 62 62 62 58 54 58 58 58 54 58 58 58 54 54 58 54 58 58 54 58 42 54 54 58 58 58 58 58 58 58 54 41 58 58 42 38 58 54 58 58 58 54 58 58 58 58 54 58 58 58 58 54 58 54 48 58 58 58 58 46 48 58 54 58 58 58 47 58 58 58 58 46 28 58 53 58 58 54 54 51 54 58 54 34 58 54 35 58 58 50 58 58 54 58 54 51 58 58 54 50 58 58 52 58 58 52 58 46 47 58 54 46 58 58 53 51 50 51 58 47 50 43 39 43 54 58 51 53 53 49 52 40 53 53 50 58 54 53 51 50 58 44 50 53 42 42 53 29 58 58 58 58 50 49 51 32 51 50 41 52 53 41 58 51 25 58 50 58 50 51 40 26 54 35 39 51 53 53 51 42 33 44 34 53 52 53 42 33 54 45 53 46 49 39 49 54 32 51 45 51 51 38 39 37 42 49 49 52 51 52 42 30 35 45 33 30 45 52 42 41 51 32 53 54 40 33 37 54 45 45 34 16 54 46 30 45 37 33 46 46 52 53 42 32 30 31 19 54 53 45 32 37 53 53 18 53 33 32 36 31 32 45 41 25 23 32 27 6 28 32 35 39 40 33 31 46 13 41 31 39 30 34 53 53 53 29 43 46 33 26 30 20 37 31 7 28 41 24 31 19 31 31 30 46 27 31 21 21 38 33 35 34 34 45 33 31 31 32 33 31 31 29 31 37 38 33 26 48 35 26 30 31 42 13 42 25 37 34 20 32 25 31 27 32 29 26 38 31 31 32 38 34 31 22 46 22 31 33 34 23 41 33 37 31 20 23 38 31 30 13 29 29 32 46 31 31 29 31 24 23 46 17 27 27 31 48 32 31 36 20 29 30 27 23 31 30 33 23 31 31 8 13 9 5 29 19 31 18 32 31 44 24 31 28 30 29 19 35 30 21 22 18 26 10 18 28 31 27 33 24 18 27 14 17 24 42 27 9 13 16 20 22 22 21 34 22 15 12 22 31 17 18 18 29 21 32 32 17 25 14 14 32 32 48 26 20 39 43 34 19 21 30 19 23 18 31 15 24 33 48 30 8 12 19 30 39 23 25 33 17 18 23 23 16 4 5 14 6 8 14 20 24 24 14 11 3 8 15 20 16 17 8 15 12 20 9 22 23 17 16 24 24 24 17 8 6 6 21 13 24 8 15 19 24 24 31 13 10 24 19 24 27 26 27 20 24 25 11 34 17 12 15 23 7 13 15 6 9 11 38 38 21 11 19 12 14 9 14 26 14 10 14 9 20 9 15 13 6 8 12 11 14 9 10 11 3 12 7 5 18 4 6 11 13 15 5 20 17 6 24 15 16 20 15 15 11 26 17 5 13 10 15 8 5 23 5 5 25 5 8 6 20 18 28 9 13 9 16 19 14 17 4 11 10 16 15 8 4 4 4 4 4 5 12 10 14 4 1 1 3 1 3 3 2 1 3 4 7 8 6 3 3 3 3 2 7 7 5 9 6 2 8 15 4 4 5 16 15 14 6 6 10 23 6 19 8 7 17 5 4 7 9 4 4 7 14 3 1 3 5 2 2 2 5 8 3 2 3 3 4 8 4 6 14 16 5 8 16 10 21 13 3 3 3 4 11 6 3 3 2 3 8 9 8 22 5 5 6 7 15 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr13_11377003_11378084
seq2: B6Ng01-237C08.b_48_1130 (reverse)

seq1  GGGAGGCAGAG-GCAGG-AGAATTTCTGAG-TTCGTGGCCAGCCTGGTCT  47
      ||||| ||||| ||||| || |||| |||| ||||||| |||||| ||||
seq2  GGGAGCCAGAGAGCAGGAAGGATTTTTGAGTTTCGTGG-CAGCCT-GTCT  48

seq1  ACAGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCG  97
      |||||||||||| || |||||||| |||||||||||||||||||||||||
seq2  ACAGAGTGAGTTTCA-GACAGCCA-GGCTATACAGAGAAACCCTGTCTCG  96

seq1  AAAAAAAAAATGTGGATAAT-GGGGGGGGGTGCTTGCTTTCAGGTATAA-  145
       ||||||||||||||||||| |||||||||||||||||||||||||||| 
seq2  -AAAAAAAAATGTGGATAATGGGGGGGGGGTGCTTGCTTTCAGGTATAAC  145

seq1  CCCCCACCATAATATCTAAAATTAGTCCACTGTTTTTAGCTGAGTATCAT  195
      ||||||||   |||||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCATATATCTAAAATTAGTCCACTGTTTTTAGCTGAGTATCAT  195

seq1  CATCAAACATTAGAACCAAAAATGTCCC-TTGGATGGTTCATTCTAATTC  244
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATCAAACATTAGAACCAAAAATGTCCCTTTGGATGGTTCATTCTAATTC  245

seq1  CCATATTTCCCAGGTGAAAAGGCTGTGCCCATGGAAGTAAGCTGATCTTC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTTCCCAGGTGAAAAGGCTGTGCCCATGGAAGTAAGCTGATCTTC  295

seq1  AGAGTGTGGAAGTCAGTATTCAGAGTCAGTCCGTCCCCTTCTCATCTGCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTGGAAGTCAGTATTCAGAGTCAGTCCGTCCCCTTCTCATCTGCC  345

seq1  TCTGATGGAGCAGTCTTTCCCTTCAGCTCTATCATCATGGCCACTGGCTT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGAGCAGTCTTTCCCTTCAGCTCTATCATCATGGCCACTGGCTT  395

seq1  TATGGTTAAGGTCTCAATGAACCTTTCTGAAAAATTAATCATTTTAAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTAAGGTCTCAATGAACCTTTCTGAAAAATTAATCATTTTAAAAA  445

seq1  CAGAAAGGTCCAGATATTGCCCTTTCAATTCTCTATTCATATTTGGATAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGTCCAGATATTGCCCTTTCAATTCTCTATTCATATTTGGATAT  495

seq1  CGGATTTGTGGCGAGTTCCCCACAAATCCTCTTCAAACACCCAGGAAGAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGATTTGTGGCGAGTTCCCCACAAATCCTCTTCAAACACCCAGGAAGAG  545

seq1  GTCAGCTGTGAAAATAAATACAAAGGAAGGAAGGAAGCTGGGAGGATTCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTGTGAAAATAAATACAAAGGAAGGAAGGAAGCTGGGAGGATTCA  595

seq1  CACCCCTGGGGCATCCTTTCTCAGCTATACCAGTGCTCCTCAGTAAGACC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTGGGGCATCCTTTCTCAGCTATACCAGTGCTCCTCAGTAAGACC  645

seq1  AACTTCCTTTTCTAGATTTCATGAATTTTGAGTTAGCTCTGTGTGTGTGT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTTTTCTAGATTTCATGAATTTTGAGTTAGCTCTGTGTGTGTGT  695

seq1  GTGCATGCATGTGTGTGTGTGTCTCTGTATGTGTTCATGCATGTGTCTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGCATGTGTGTGTGTGTCTCTGTATGTGTTCATGCATGTGTCTGT  745

seq1  GTGTGTATATGCATGTGTGTATGTCTGCATGAGTGCATTTCTGTGTGTGT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATATGCATGTGTGTATGTCTGCATGAGTGCATTTCTGTGTGTGT  795

seq1  GTCTGTATATGTACATGTATGCGTGCATGTATATGTTTGTGTGTGTGTGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTATATGTACATGTATGCGTGCATGTATATGTTTGTGTGTGTGTGT  845

seq1  GTGCATGTGCATGAGTGTGTGTGTGTCTATGTATCTGCATGTGTATATGT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTGCATGAGTGTGTGTGTGTCTATGTATCTGCATGTGTATATGT  895

seq1  CTGTGTGTTTGGATATGTGCATGTGTATGTGTATGTGTTTGTGTGCATGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGTTTGGATATGTGCATGTGTATGTGTATGTGTTTGTGTGCATGT  945

seq1  GTGTGTATGTGTATGTCTAGGTGGGCATGTGCACTTGAGTGCAGGTGTCA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTGTATGTCTAGGTGGGCATGTGCACTTGAGTGCAGGTGTCA  995

seq1  CAGAAGCTGGAAGTGTCAAATGCCCTGGAGATGGAGGGACAGTTGCTTAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTGGAAGTGTCAAATGCCCTGGAGATGGAGGGACAGTTGCTTAT  1045

seq1  GACCTGTCTGACCTGAGTGGGTGCTGGGAAATGAATTC  1082
      ||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTCTGACCTGAGTGGGTGCTGGGAAATGAATTC  1083

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information