BAC Information

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BAC

Clone NameB6Ng01-237L21
Chromosome13 (Build37)
Map Location 65,701,551 - 65,702,602
singlet/doubletsinglet
Overlap genenone
Upstream genePpia-ps13_866.1, LOC238678, LOC631470, Cntnap3, EG432767, 4930458L03Rik, LOC218301, LOC628515, 4932441B19Rik, Gm274, Hiatl1, LOC100042311, Olfr465-ps1, Olfr466, Nlrp4f, ENSMUSG00000074847, Zfp369, LOC100042347, LOC100042341, LOC665738, EG665742, LOC665750, LOC665753, EG544944, EG665767, LOC665777, EG628648, LOC665809, LOC100042404
Downstream geneLOC628722, LOC665851, Vmn2r-ps99, LOC628794, EG665897, LOC100041855, EG628746, LOC100042434, LOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237L21.bB6Ng01-237L21.g
ACCGA048618GA048619
length6591,062
definitionB6Ng01-237L21.b B6Ng01-237L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccattaaaacaatctctctattgggatttattggttaggagac
attcaatacatgcttctatttctttaggggctatagagatgtttaaatag
tttacctgtccctgatttaactttccaattggtatttggatagaaaatca
cccatttcattaggattttacaattttgtggagtataggcttttggagta
agacctaatgattctttgaacttcctcaatgtgacttgttttgtctttct
catcattactgactttgtttatttagattctgtttcgctgtcctttgctt
attttcgctagggtttgtctctcttgttggttttctcaaagaatcagctc
ttagctttcttgatttgttatattgttttctttgttatgagctgatttat
ttcagccttgattttcattattttcttcctcctactccttgttgatattc
ttgcaccttttttttctagagatttcaggtgtacttttcaattgctggtt
tcagcatttaaaatttctttatgggggcattaagtgctatgaacattcct
ctttgcactgttttcattgtgtctcataaaactggatatattgtaccttc
attttcattggattccataaagtgtttttccttccttccttccttccttt
cttccttcc
gaattccaaagaaggaggccataatgtcagtgaaagaatgaacttgccaa
gaagagtgagggcaagcaggcaaagatcaagtttcctttttccacattct
ttataggctgccaccagaagatgtggcccaggtttaaaggtggatcttct
caaaaagacctgaatttagggtgagtcttcacacttcaactgattaatca
agaaaagtctttcacaggtgtactcagtcacttggattttagttaattct
agatgtagtcaacttgacaatcaaaaataccagcctgagctacatgacat
tctatctcaaaataaaggatataaaatagagacagatgtatctctcaatg
ggtagaggtgtttgctgccaagctgacaacctgaacttgactcccaggac
ccacgtgatagaaggaaaaaaaaatcaactaatatgaattgtcctctgac
ctccatacatatggacacattaattaattaaaatgcactaacatatttaa
aaaattaaaaagtagtaattacatcagcacacaactaccatattttaaca
gaaaaaaattataaattagtaattagaggaaagttccaccttaatatttt
gtaccatcattctagacaactgtttagtcaaaaaagagatttaaaagaaa
aatccttgggactgggtagataagatagctcagtgataaacagtgagtat
tgctcttccagaggacccaagttcagttcccagcttccatatgaggcagt
tcacaatcacctgtaactccagccctaggggatctgacacctttagcctc
tatcagcacctgcctgcatagatgtgcacataattacacacactattaat
aagtatttaaaataaatattttaataacgaaaactcatctgcgtgtagta
acacacctctttaatcccagccctcaagaggcagagtgggcccaacctgg
gtctacatagcacgttcccatccagaattccatagaaagattcttattct
ccaaaaagaaaaaagaacgaaaagaaagagaagtgaagggggggtaaggg
gaggaaaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_65701551_65702602
seq2: B6Ng01-237L21.g_62_1123

seq1  GAATTCCAAAGAAGGAGGCCATAATGTCAGTGAAAGAATGAACTTGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGAAGGAGGCCATAATGTCAGTGAAAGAATGAACTTGCCAA  50

seq1  GAAGAGTGAGGGCAAGCAGGCAAAGATCAAGTTTCCTTTTTCCACATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGTGAGGGCAAGCAGGCAAAGATCAAGTTTCCTTTTTCCACATTCT  100

seq1  TTATAGGCTGCCACCAGAAGATGTGGCCCAGGTTTAAAGGTGGATCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGGCTGCCACCAGAAGATGTGGCCCAGGTTTAAAGGTGGATCTTCT  150

seq1  CAAAAAGACCTGAATTTAGGGTGAGTCTTCACACTTCAACTGATTAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGACCTGAATTTAGGGTGAGTCTTCACACTTCAACTGATTAATCA  200

seq1  AGAAAAGTCTTTCACAGGTGTACTCAGTCACTTGGATTTTAGTTAATTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTCTTTCACAGGTGTACTCAGTCACTTGGATTTTAGTTAATTCT  250

seq1  AGATGTAGTCAACTTGACAATCAAAAATACCAGCCTGAGCTACATGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAGTCAACTTGACAATCAAAAATACCAGCCTGAGCTACATGACAT  300

seq1  TCTATCTCAAAATAAAGGATATAAAATAGAGACAGATGTATCTCTCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTCAAAATAAAGGATATAAAATAGAGACAGATGTATCTCTCAATG  350

seq1  GGTAGAGGTGTTTGCTGCCAAGCTGACAACCTGAACTTGACTCCCAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGTGTTTGCTGCCAAGCTGACAACCTGAACTTGACTCCCAGGAC  400

seq1  CCACGTGATAGAAGGAAAAAAAAATCAACTAATATGAATTGTCCTCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGTGATAGAAGGAAAAAAAAATCAACTAATATGAATTGTCCTCTGAC  450

seq1  CTCCATACATATGGACACATTAATTAATTAAAATGCACTAACATATTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATACATATGGACACATTAATTAATTAAAATGCACTAACATATTTAA  500

seq1  AAAATTAAAAAGTAGTAATTACATCAGCACACAACTACCATATTTTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAAAAGTAGTAATTACATCAGCACACAACTACCATATTTTAACA  550

seq1  GAAAAAAATTATAAATTAGTAATTAGAGGAAAGTTCCACCTTAATATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAATTATAAATTAGTAATTAGAGGAAAGTTCCACCTTAATATTTT  600

seq1  GTACCATCATTCTAGACAACTGTTTAGTCAAAAAAGAGATTTAAAAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCATCATTCTAGACAACTGTTTAGTCAAAAAAGAGATTTAAAAGAAA  650

seq1  AATCCTTGGGACTGGGTAGATAAGATAGCTCAGTGATAAACAGTGAGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTGGGACTGGGTAGATAAGATAGCTCAGTGATAAACAGTGAGTAT  700

seq1  TGCTCTTCCAGAGGACCCAAGTTCAGTTCCCAGCTTCCATATGAGGCAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCCAGAGGACCCAAGTTCAGTTCCCAGCTTCCATATGAGGCAGT  750

seq1  TCACAATCACCTGTAACTCCAGCCCTAGGGGATCTGACACCTTTAGCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATCACCTGTAACTCCAGCCCTAGGGGATCTGACACCTTTAGCCTC  800

seq1  TATCAGCACCTGCCTGCATAGATGTGCACATAATTACACACACTATTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGCACCTGCCTGCATAGATGTGCACATAATTACACACACTATTAAT  850

seq1  AAGTATTTAAAATAAATATTTTAATAACGAAAACTCATCTGCGTGTAGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTAAAATAAATATTTTAATAACGAAAACTCATCTGCGTGTAGTA  900

seq1  ACACACCTCTTTAATCCCAGCCCTCAAGAGGCAGAGGTGGGCCAACCT-G  949
      ||||||||||||||||||||||||||||||||||||  || ||||||| |
seq2  ACACACCTCTTTAATCCCAGCCCTCAAGAGGCAGAGTGGGCCCAACCTGG  950

seq1  GTCTACATAGCACGTTCCCATCCAGAATTCCATAGAAAGATTCT--ATCT  997
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  GTCTACATAGCACGTTCCCATCCAGAATTCCATAGAAAGATTCTTATTCT  1000

seq1  CCAAAAAG-AAAAAGAACGAAAAG-AAGAGAAGTGAAGGGGGG---AAGG  1042
      |||||||| ||||||||||||||| ||||||||||||||||||   | ||
seq2  CCAAAAAGAAAAAAGAACGAAAAGAAAGAGAAGTGAAGGGGGGGTAAGGG  1050

seq1  GAG--AAGGGGG  1052
      |||  |||||||
seq2  GAGGAAAGGGGG  1062