BAC Information

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BAC

Clone NameB6Ng01-239I21
Chromosome13 (Build37)
Map Location 34,747,042 - 34,747,702
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000000712, LOC193403, Vmn2r-ps94, OTTMUSG00000000720, Serpinb6c, Serpinb6a, Nqo2, 4930482L21Rik, Ripk1, Bphl, Tubb2a, LOC100042686, Tubb2b, 2310047M15Rik, 3110004L20Rik, LOC620132, EG666666, 1300014I06Rik
Downstream geneD0H6S2654E, EG432746, LOC666677, Prpf4b, 4933417A18Rik, LOC666697, 1810022C23Rik, Peci
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-239I21.bB6Ng01-239I21.g
ACCGA049949GA049950
length6601,184
definitionB6Ng01-239I21.b B6Ng01-239I21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacgcagtcttttgtatactcctgctatttattcctatggatgg
aattgaagtatctggttcccaaagctcttacctgtgagcaaagttccacc
ttggatacaagtcggtaactgtaaacctggctgggctgtggagcaggtga
cccggagagctcctgttggctctccactttcacattctattatgtagctc
ccagcactgaatcagccaaataagcttgacttataacccgaaaccaccca
tgtcttgtgtatctgttactgacatttatgtaacacaggccctcaaaggt
gtttgcaaccctgcacagcactggagagcttttgaattcttgctttaaag
tcccaacttaatttgagatgctgttcaaaaagttccagattttgactctt
ttttttttttttttttttttttggacttcagattaggcgtggtcagcctg
gtactgtttagatccatatcaaaaaacacctttggtcccaagcattgcct
agtgccaataactacagctcctatgattgaggggaacaacaaccgtgtca
tgtccagaagtcagcataccatggctcctccccacccaccgacatacaca
ctttctgctccctgatctatgatgttctctgagccttagatagggggtgg
gggtggggaa

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataataaccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgtcggggccctagcaaa
cacagaagtggatgctcacagtcagctaatggatggatcatagggctccc
aatgggaggagctagagaaagtagccaaggagctaaggggatctgcaacc
ctataggtggacacataatgaactaacccagtacccgggagctctttgac
tctagctgcatatatattcaaagatggcctagtcgtcattcacttgaaag
agaggtccaattggacttgcaactttatatgccaagttacatggtaacct
ccaggactcaaaatggtggcgaaatctgggactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_34747042_34747702
seq2: B6Ng01-239I21.b_48_707 (reverse)

seq1  TTCCCCACCCCCACCCCCTATCTAAGGCTCAGAGAACATCATAGATCAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCACCCCCACCCCCTATCTAAGGCTCAGAGAACATCATAGATCAGG  50

seq1  GAGCAGAAAGTGTGTATGTCGGTGGGTGGGGAGGAGCCATGGTATGCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAAAGTGTGTATGTCGGTGGGTGGGGAGGAGCCATGGTATGCTGA  100

seq1  CTTCTGGACATGACACGGTTGTTGTTCCCCTCAATCATAGGAGCTGTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGACATGACACGGTTGTTGTTCCCCTCAATCATAGGAGCTGTAGT  150

seq1  TATTGGCACTAGGCAATGCTTGGGACCAAAGGTGTTTTCTGATATGGATC  200
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TATTGGCACTAGGCAATGCTTGGGACCAAAGGTGTTTTTTGATATGGATC  200

seq1  TAAACAGTACCAGGCTGACCACGCCTAATCTGAAGTCCAAAAAAAAAAAA  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAAACAGTACCAGGCTGACCACGCCTAATCTGAAGTCC-AAAAAAAAAAA  249

seq1  AAAAAAAAAAAAAGAGTCAAAATCTGGAACTTTTTGAACAGCATCTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGAGTCAAAATCTGGAACTTTTTGAACAGCATCTCAAA  299

seq1  TTAAGTTGGGACTTTAAAGCAAGAATTCAAAAGCTCTCCAGTGCTGTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGGGACTTTAAAGCAAGAATTCAAAAGCTCTCCAGTGCTGTGCA  349

seq1  GGGTTGCAAACACCTTTGAGGGCCTGTGTTACATAAATGTCAGTAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCAAACACCTTTGAGGGCCTGTGTTACATAAATGTCAGTAACAGA  399

seq1  TACACAAGACATGGGTGGTTTCGGGTTATAAGTCAAGCTTATTTGGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAGACATGGGTGGTTTCGGGTTATAAGTCAAGCTTATTTGGCTGA  449

seq1  TTCAGTGCTGGGAGCTACATAATAGAATGTGAAAGTGGAGAGCCAACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTGCTGGGAGCTACATAATAGAATGTGAAAGTGGAGAGCCAACAGG  499

seq1  AGCTCTCCGGGTCACCTGCTCCACAGCCCAGCCAGGTTTACAGTTACCGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCCGGGTCACCTGCTCCACAGCCCAGCCAGGTTTACAGTTACCGA  549

seq1  CTTGTATCCAAGGTGGAACTTTGCTCACAGGTAAGAGCTTTGGGAACCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATCCAAGGTGGAACTTTGCTCACAGGTAAGAGCTTTGGGAACCAG  599

seq1  ATACTTCAATTCCATCCATAGGAATAAATAGCAGGAGTATACAAAAGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTTCAATTCCATCCATAGGAATAAATAGCAGGAGTATACAAAAGACT  649

seq1  GCGTGGAATTC  661
      |||||||||||
seq2  GCGTGGAATTC  660


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