BAC Information

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BAC

Clone NameB6Ng01-242D20
Chromosome13 (Build37)
Map Location 67,241,890 - 67,243,014
singlet/doubletsinglet
Overlap geneZfp759
Upstream geneLOC100041892, EG665974, LOC100041915, 2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708
Downstream geneRsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242D20.bB6Ng01-242D20.g
ACCGA051938GA051939
length1,2191,115
definitionB6Ng01-242D20.b B6Ng01-242D20.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagacatctgcctgctcctgttaagcacaggcaataagctgggtg
tgtggaacctcattctgaaattgccattcctaccacaactgagactaact
ttgctctgtaccaggaagaccgtaaactcaggaatctgtctgcccctgta
agcagaaacaaaaactaagctgggtgggatcttcttcaattaccactccc
taaatctttttatctcctcccttagtattttctgacaaattggctttgag
ttgttcttttagatttgtgaagcctcttatataatccatactacatcctt
atattttgcttgagaaattatatatttttggattcatattttcagagttt
tttcccatagccttaaaggctggctggctggtcccagtatttaccatttt
gctgagacattagctgcacctttgactcctggactcatgctgtttctaag
tattatagagtcatttaattaacagagaggacattccttgaagggggagc
atgtacattattatacaaacaagcagccatcaatactcatgcagcctcat
gctggtcctgttccaggggtgggaactatgtcatcccaaccacagcaact
gcccacctcacatctccctttgactcatccctcccactgtatccccttca
gaaaagagcaagcctttcatcaactgagtttccaccaatccagtaggagg
aaagtagtaccaagaacaggaaagacatcagagacacccccactctgact
gtcaggaaccccacaaaaacctaaagtctacagccgtcacatatgctgcg
gacctaatagagacttctgctgcctccatgattcccacttcagtctctgt
gatccaccatgagccctgcttaaatgattcctcagcagtacttctgcagt
gtcctctactcctaggaatcctagatactttatccctcccttctgcagga
ttccccaagctccaaggaagaaacctgatggagacttccacccacactct
ctactaacgtttggttgtgggtcttgtgcttcattccagtagctttcaga
gaacactgctctagtgatgagtggactaggcatgcatctattagatatta
tggtgtgaatatatgcagccatagacctcacgttgatgaatcttttgttc
caataagatgtcactataaaggtgtggcctttggagtagagtgttatttc
ctgcaagagaatggtctag
gaattcatctatgagagaaaccacacagtgtgaagaatgtgctaaggtct
tttggacttacagaaaccttggggaaaacctcataattcatactagactg
aaatgtcacaagtatgaaaaatattgcaaaccctttaatgagcattctta
tatttctgaaaacaaggtagcttgaactagagtgaaatagtacaaatgtt
aaaatgttcaaaaaaatcttaacttcttcaaacctaaaaattgtcaaaag
cttcatgctgaaccgaagccctataagttttgggaatgtggtaaaggctt
tggaatcattcataaaatcatgccaaaattggagctctcagactgtgtgt
ttgtccttctggatttggggctgattctttcttactgtctttttgtttct
tctgttttagaattgaaacccttgttctataccagtatgtaaaaagaagt
cacttgttcttatgttgtagaagctcacagtcaagagatttccttgagtc
tcatttgacacatgggctgtggtctttcatagtgttgtaattgtttaatc
ctttgtggacctttcaagttgtaggctgtttgacttctgaggtggggcta
aggttggggaaagggaaggaatgttatgatttaaaactttgtggctagag
ctagcatgttgactttggaaacaaactgaatttcctataacccccacatg
catgttagtattcccagtactcacaaagtagaagtaattacctctgaagg
ttttcctctgacctccatgaataggctcccacacaaacataaatttgtgt
gcccagaaataaataaacataattatgcttttgagtgactttgcatttta
tgtggccaagcatcaaaaagtaatgcttatatctcaatttgttagaaatc
atttgagttgcaaacctcctgttgatttgtaggacttatcttaattagtt
taattgatttcagaagtcactttatttcattggaagtatctgtttgactg
agatgctgcagtatcagatataccctttagatcactatttatcatctctg
ctctcactggtgagaaatatgacagctgccttaaggttctgttgtttact
tctcacagtgtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67241890_67243014
seq2: B6Ng01-242D20.g_66_1180

seq1  GAATTCATCTATGAGAGAAACCACACAGTGTGAAGAATGTGCTAAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTATGAGAGAAACCACACAGTGTGAAGAATGTGCTAAGGTCT  50

seq1  TTTGGACTTACAGAAACCTTGGGGAAAACCTCATAATTCATACTAGACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGACTTACAGAAACCTTGGGGAAAACCTCATAATTCATACTAGACTG  100

seq1  AAATGTCACAAGTATGAAAAATATTGCAAACCCTTTAATGAGCATTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCACAAGTATGAAAAATATTGCAAACCCTTTAATGAGCATTCTTA  150

seq1  TATTTCTGAAAACAAGGTAGCTTGAACTAGAGTGAAATAGTACAAATGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGAAAACAAGGTAGCTTGAACTAGAGTGAAATAGTACAAATGTT  200

seq1  AAAATGTTCAAAAAAATCTTAACTTCTTCAAACCTAAAAATTGTCAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTTCAAAAAAATCTTAACTTCTTCAAACCTAAAAATTGTCAAAAG  250

seq1  CTTCATGCTGAACCGAAGCCCTATAAGTTTTGGGAATGTGGTAAAGGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGCTGAACCGAAGCCCTATAAGTTTTGGGAATGTGGTAAAGGCTT  300

seq1  TGGAATCATTCATAAAATCATGCCAAAATTGGAGCTCTCAGACTGTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCATTCATAAAATCATGCCAAAATTGGAGCTCTCAGACTGTGTGT  350

seq1  TTGTCCTTCTGGATTTGGGGCTGATTCTTTCTTACTGTCTTTTTGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTCTGGATTTGGGGCTGATTCTTTCTTACTGTCTTTTTGTTTCT  400

seq1  TCTGTTTTAGAATTGAAACCCTTGTTCTATACCAGTATGTAAAAAGAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTAGAATTGAAACCCTTGTTCTATACCAGTATGTAAAAAGAAGT  450

seq1  CACTTGTTCTTATGTTGTAGAAGCTCACAGTCAAGAGATTTCCTTGAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGTTCTTATGTTGTAGAAGCTCACAGTCAAGAGATTTCCTTGAGTC  500

seq1  TCATTTGACACATGGGCTGTGGTCTTTCATAGTGTTGTAATTGTTTAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGACACATGGGCTGTGGTCTTTCATAGTGTTGTAATTGTTTAATC  550

seq1  CTTTGTGGACCTTTCAAGTTGTAGGCTGTTTGACTTCTGAGGTGGGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGGACCTTTCAAGTTGTAGGCTGTTTGACTTCTGAGGTGGGGCTA  600

seq1  AGGTTGGGGAAAGGGAAGGAATGTTATGATTTAAAACTTTGTGGCTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGGAAAGGGAAGGAATGTTATGATTTAAAACTTTGTGGCTAGAG  650

seq1  CTAGCATGTTGACTTTGGAAACAAACTGAATTTCCTATAACCCCCACATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCATGTTGACTTTGGAAACAAACTGAATTTCCTATAACCCCCACATG  700

seq1  CATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAGTATTCCCAGTACTCACAAAGTAGAAGTAATTACCTCTGAAGG  750

seq1  TTTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCTGACCTCCATGAATAGGCTCCCACACAAACATAAATTTGTGT  800

seq1  GCCCAGAAATAAATAAACATAATTATGCTTTTGAGTGACTTTGCATTTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGAAATAAATAAACATAATTATGCTTTTGAGTGACTTTGCATTTTA  850

seq1  TGTGGCCAAGCATCAAAAAGTAATGCTTATATCTCAA-TTGTTAGAAATC  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGTGGCCAAGCATCAAAAAGTAATGCTTATATCTCAATTTGTTAGAAATC  900

seq1  ATTTGAGTTGCAAACCTCCTGTTGATTTGTAGGACTTATCTTAATTAGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGTTGCAAACCTCCTGTTGATTTGTAGGACTTATCTTAATTAGTT  950

seq1  TAATTGATTTCAGAAGGTCACTTAATTTCATTTGGAAGTATCTGTTTGAC  999
      ||||||||||||||| ||||||| |||||| |||||||||||||||||||
seq2  TAATTGATTTCAGAA-GTCACTTTATTTCA-TTGGAAGTATCTGTTTGAC  998

seq1  TGAGATGCTGCAGTATCAGATAATACCC-TTAGATCAACTATTTATCCAT  1048
      ||||||||||||||||||||| |||||| ||||||| ||||||||| |||
seq2  TGAGATGCTGCAGTATCAGAT-ATACCCTTTAGATC-ACTATTTAT-CAT  1045

seq1  CTCCTGCTTCCTCACTGTGGAAGAAATATGACCAGCTG-CTTATGTTCCT  1097
      || |||||  ||||||| |  |||||||||| |||||| |||| | | ||
seq2  CT-CTGCT--CTCACTG-GTGAGAAATATGA-CAGCTGCCTTAAGGTTCT  1090

seq1  GTTGTTTTAACTTTCTCACCATGTGTTG  1125
      |||||||  || |||||||  |||||||
seq2  GTTGTTT--AC-TTCTCACAGTGTGTTG  1115