BAC Information

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BAC

Clone NameB6Ng01-242M02
Chromosome13 (Build37)
Map Location 4,973,346 - 4,974,529
singlet/doubletsinglet
Overlap genenone
Upstream geneAkr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
Downstream gene1700016G22Rik, Klf6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242M02.bB6Ng01-242M02.g
ACCGA052315GA052316
length1,187618
definitionB6Ng01-242M02.b B6Ng01-242M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaaagtgttctaaggctggtgaaactacccttttaactagaat
aaaagtgcatttaatttaaattttaatcatgtaagatagacttttgacct
ctctacagagatgagcaatgttgaagagcttctatgttctctgttcttct
cacatggatgtttctttactcacaactatgtaaacctcagcatcacatca
gataatgactctctggggttggatgcttgactactagaacctctctttag
ttatttcattgttagatgcccaatttcatttcaaacatgtatacatttgt
gagtatatctacttttatatcttaaaaatcttttctccttttgggatggt
tccatattccctcagactgtaagtacctgaaccctacaacatgtgcatca
ataataaatccgatctatgccaagtgctcctcctgttgcatccttagttg
ggacctagtgtcatcaggattgactataaaccccttcaggccttttgctc
tgtactacatttaagtgcaactaaggttgctttctttcaggaacttcctg
tttcacaccatctaacaccttccaggaaggagctgattcctatgaattcc
tatcctacagtcctgggtgccaaggcaggccttgtatctttaaccatctt
ttactttcatacatgcttctgagttgacaaccatagccatgtttgggtgg
cctttaaagaccccataaggcactttctctcccacttacaatcctaaggt
gtttaaaactcatcactaatgcttaactctgaaaatgcttctgctatttt
tcactgaagtgtattcatcttctatgatatgtttcattaagtcaagtcaa
tatacatgagtcacaaaatccagtttatatcccatgcccaatcttcatct
acctgttgctgcattgagttcctggataacatcattttcaatttgtgctg
ccccccacggaactagtgaaagaagcctcattctggggaccctggggact
gctttaagccaattgttcttgtttgcctgtgctttccacccttcaaggca
gtttgctgtgtatctctctctcagagcacaacttctgcttcaggatcaat
ggccattgatgggtttttttatcattgcttgtagccttctacctaccagt
aacttgtctactttgtctgacccaagaaatatgcctg

gaattctttgtttacctctgaaccccaatttttaatggggttatttgaat
ttctggagtccagcttcttgagctctttgtatatattggatattagtcca
cgatcagatttaggattagattgtatctctagctgcatatgtagcagaag
atggtctagtcggccacgactgggaagagaggccccttggtattgcaaac
tttacatgccccagtacaggggaatgccagggccaagaagcaggagtagg
tgggtaggggagcagggcggagggagggtatagggaacattcaggatagc
atttgaaatgtatataaagaaaatatctaataaaaaaatcctaaaatgaa
aaaaaaaattaaagcttcatgcgtgtgtctttcattcagaacactggggc
aggtagcaaagaatgcactgctgccaggggaatttgagtggagtttaatt
agtgattgtaatgcatttccctgataactaaggacattgaacatttcttt
atttgcttctcggctattagagattcctctgttgagaattctctgtttca
tctctgtactcccatttttaaattggggttattttggttttgctgatgtc
taactttcttggagttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4973346_4974529
seq2: B6Ng01-242M02.b_46_1232

seq1  GAATTCAAAAAGTGTTCTAAGGCTGGTGAAACTACCCTTTTAACTAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAAGTGTTCTAAGGCTGGTGAAACTACCCTTTTAACTAGAAT  50

seq1  AAAAGTGCATTTAATTTAAATTTTAATCATGTAAGATAGACTTTTGACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGCATTTAATTTAAATTTTAATCATGTAAGATAGACTTTTGACCT  100

seq1  CTCTACAGAGATGAGCAATGTTGAAGAGCTTCTATGTTCTCTGTTCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAGAGATGAGCAATGTTGAAGAGCTTCTATGTTCTCTGTTCTTCT  150

seq1  CACATGGATGTTTCTTTACTCACAACTATGTAAACCTCAGCATCACATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGATGTTTCTTTACTCACAACTATGTAAACCTCAGCATCACATCA  200

seq1  GATAATGACTCTCTGGGGTTGGATGCTTGACTACTAGAACCTCTCTTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGACTCTCTGGGGTTGGATGCTTGACTACTAGAACCTCTCTTTAG  250

seq1  TTATTTCATTGTTAGATGCCCAATTTCATTTCAAACATGTATACATTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCATTGTTAGATGCCCAATTTCATTTCAAACATGTATACATTTGT  300

seq1  GAGTATATCTACTTTTATATCTTAAAAATCTTTTCTCCTTTTGGGATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATATCTACTTTTATATCTTAAAAATCTTTTCTCCTTTTGGGATGGT  350

seq1  TCCATATTCCCTCAGACTGTAAGTACCTGAACCCTACAACATGTGCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTCCCTCAGACTGTAAGTACCTGAACCCTACAACATGTGCATCA  400

seq1  ATAATAAATCCGATCTATGCCAAGTGCTCCTCCTGTTGCATCCTTAGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAAATCCGATCTATGCCAAGTGCTCCTCCTGTTGCATCCTTAGTTG  450

seq1  GGACCTAGTGTCATCAGGATTGACTATAAACCCCTTCAGGCCTTTTGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTAGTGTCATCAGGATTGACTATAAACCCCTTCAGGCCTTTTGCTC  500

seq1  TGTACTACATTTAAGTGCAACTAAGGTTGCTTTCTTTCAGGAACTTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTACATTTAAGTGCAACTAAGGTTGCTTTCTTTCAGGAACTTCCTG  550

seq1  TTTCACACCATCTAACACCTTCCAGGAAGGAGCTGATTCCTATGAATTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACCATCTAACACCTTCCAGGAAGGAGCTGATTCCTATGAATTCC  600

seq1  TATCCTACAGTCCTGGGTGCCAAGGCAGGCCTTGTATCTTTAACCATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTACAGTCCTGGGTGCCAAGGCAGGCCTTGTATCTTTAACCATCTT  650

seq1  TTACTTTCATACATGCTTCTGAGTTGACAACCATAGCCATGTTTGGGTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCATACATGCTTCTGAGTTGACAACCATAGCCATGTTTGGGTGG  700

seq1  CCTTTAAAGACCCCATAAGGCACTTTCTCTCCCACTTACAATCCTAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAGACCCCATAAGGCACTTTCTCTCCCACTTACAATCCTAAGGT  750

seq1  GTTTAAAACTCATCACTAATGCTTAACTCTGAAAATGCTTCTGCTATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAACTCATCACTAATGCTTAACTCTGAAAATGCTTCTGCTATTTT  800

seq1  TCACTGAAGTGTATTCATCTTCTATGATATGTTTCATTAAGTCAAGTCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAAGTGTATTCATCTTCTATGATATGTTTCATTAAGTCAAGTCAA  850

seq1  TATACATGAGTCACAAAATCCAGTTTATATCCCATGCCCAATCTTCATCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATGAGTCACAAAATCCAGTTTATATCCCATGCCCAATCTTCATCT  900

seq1  ACCTGTTGCTGCATTGAGTTCCTGGATAACATCATTTTCAATTTGTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTTGCTGCATTGAGTTCCTGGATAACATCATTTTCAATTTGTGCTG  950

seq1  -CCCCCACGGAACTAGTGAA--GAGCCTCATTCT-GGGACCCTGGGGACT  996
       |||||||||||||||||||   ||||||||||| |||||||||||||||
seq2  CCCCCCACGGAACTAGTGAAAGAAGCCTCATTCTGGGGACCCTGGGGACT  1000

seq1  GCTTTAAGCCAATTGT--CTGTT--GCTGTGCTTTCCACCCTTC-AGGCA  1041
      ||||||||||||||||   ||||   |||||||||||||||||| |||||
seq2  GCTTTAAGCCAATTGTTCTTGTTTGCCTGTGCTTTCCACCCTTCAAGGCA  1050

seq1  GTTTGCTGTGTATCTCTCTTCTCAGAAGCAC-ACTTCTGC-TCAGAATCA  1089
      |||||||||||||||||| |||||| ||||| |||||||| |||| ||||
seq2  GTTTGCTGTGTATCTCTC-TCTCAG-AGCACAACTTCTGCTTCAGGATCA  1098

seq1  AATTGGCCATGAATGG--TTTTTTATCCAATTTCCTTGTAG-CTTCTAAC  1136
      |  |||||||  ||||  |||||||||    || ||||||| ||||| ||
seq2  A--TGGCCATTGATGGGTTTTTTTATC---ATTGCTTGTAGCCTTCT-AC  1142

seq1  CTACCAGTAACTTTGTCTACTTTGTCTTGACCACAAGAAATATGCCTG  1184
      ||||||||||| |||||||||||||| ||||| |||||||||||||||
seq2  CTACCAGTAAC-TTGTCTACTTTGTC-TGACC-CAAGAAATATGCCTG  1187


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