BAC Information

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BAC

Clone NameB6Ng01-243D14
Chromosome13 (Build37)
Map Location 120,128,617 - 120,129,697
singlet/doubletsinglet
Overlap geneNnt
Upstream geneMrps30, LOC668309, LOC100041278, Fgf10, LOC100041298, LOC100041757
Downstream genePaip1, LOC100041802, 4833420G17Rik, 3110070M22Rik, EG633640
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243D14.bB6Ng01-243D14.g
ACCGA052665GA052666
length1,1791,078
definitionB6Ng01-243D14.b B6Ng01-243D14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaggtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattggaaggagcaatttgcaaatttgtctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactacagagcaattgtgataaaaactgca
ctggtactggtatagagacagacaagtagaccaatggaatagaattgaag
atccagaaatgaacccacacacctatggtcacttgatcttcgacaaggga
gctaaaaccatccagtggaaagaaagacagcattttcaacaattggtgct
ggcacactggtttgttatcgtgtagaagaatgcgaatcgatccatactta
tctgcttgtacttagttcaaatctagtgatcaggactttcacataaaaac
agagaacactgaactatgaaggagaaagtggggaaaagctgagatatggg
cacagggaaaactcctgaaccgaacagcattgctgctgtagatcggaatc
gcatgactaatgaactcaaagtttctgca
gaattcccaaccctgagctggtgagaagctctagccaaactttgaaatgg
aggactgctttttcttctgacctcttccctgcctttctagcttccatcaa
ttccattaaagctgtggttggatgaatacccatcaagagattctgcaaat
gacatttcttctctgaatttgttcattcattcactttttgtgaacccttc
atatttggcagacatggtgcctggtattgaaagataaatatggtggccaa
gaaataggattaatatacaaaggacagcatgtctgactggaagaaaccaa
tcgatgcttcagtcttcttgctttaactgtagaactctgggtgttatgtc
ctctgtcttttaaacactccagtgtgttactgtcacttttattttgtgat
gttctgtatcaatgtctgaaaaattatgcatcttcaacaccaggtgtgta
gtatttttttttcctccacctttaattacagcgactgcaatggaacatta
acacaatgtttgttggcatgatgttaacttttaaattggaaacaattcca
gcctaaatggctgttttaagagatcagaacttatcagaaactatcatgag
aaaatataacgcctttaaatttgagagaatattatttaattaataccatc
gaaagttcacctaagacatatatggaagagtaaatttccaaagttacagt
gttgcttttatgaaggaagttatagtttgtaagtcccaaggcactgggtt
ttccaacttcagcgtttgtagaatggcgaatggccgtatatctcgccgaa
ttccccttctgcttgcagagatcagatagagctaggagaaagcagaggtg
ccaagaacaaggagtgcagatttggaggggacactgggccctctgtacac
ttgacctatcaagtaaagccagctgcttacttgtctcctgtccaggtttg
gaatccacccagttgcgggccgatgcctgggtcagcttaatgtgctcctg
ggccgagcgggagtgctctatgatatggtgtagaaatgatgagatcacag
tgattttccaggtaagtggcggtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_120128617_120129697
seq2: B6Ng01-243D14.g_65_1142 (reverse)

seq1  CACACACCGCCACTTACCTGGAAAATCACTGTTGATCTCATCCATTTCTA  50
      ||||||||||||||||||||||||||||||| ||||||||| ||||||| 
seq2  CACACACCGCCACTTACCTGGAAAATCACTG-TGATCTCAT-CATTTCT-  47

seq1  ACACAATATCATAGGGCACTCCCGCCTCGG-CCAGGAGCACATTAAGCTG  99
      |||| ||||||||| ||||||||| ||||| |||||||||||||||||||
seq2  ACACCATATCATAGAGCACTCCCG-CTCGGCCCAGGAGCACATTAAGCTG  96

seq1  A-CCAGGCATTCGGCCCGCAACTGGGTGGATTCCAAACCTGGACAGGAGA  148
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGCA-TCGGCCCGCAACTGGGTGGATTCCAAACCTGGACAGGAGA  145

seq1  CAAGTAAGCAGCTGGCTTTACTTGATAGGTCAAGTGTACAGAGGGCCCAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTAAGCAGCTGGCTTTACTTGATAGGTCAAGTGTACAGAGGGCCCAG  195

seq1  TGTCCCCTCCAAATCTGCACTCCTTGTTCTTGGCACCTCTGCTTTCTCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCTCCAAATCTGCACTCCTTGTTCTTGGCACCTCTGCTTTCTCCT  245

seq1  AGCTCTATCTGATCTCTGCAAGCAGAAGGGGAATTCGGCGAGATATACGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTATCTGATCTCTGCAAGCAGAAGGGGAATTCGGCGAGATATACGG  295

seq1  CCATTCGCCATTCTACAAACGCTGAAGTTGGAAAACCCAGTGCCTTGGGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCGCCATTCTACAAACGCTGAAGTTGGAAAACCCAGTGCCTTGGGA  345

seq1  CTTACAAACTATAACTTCCTTCATAAAAGCAACACTGTAACTTTGGAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAAACTATAACTTCCTTCATAAAAGCAACACTGTAACTTTGGAAAT  395

seq1  TTACTCTTCCATATATGTCTTAGGTGAACTTTCGATGGTATTAATTAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCTTCCATATATGTCTTAGGTGAACTTTCGATGGTATTAATTAAAT  445

seq1  AATATTCTCTCAAATTTAAAGGCGTTATATTTTCTCATGATAGTTTCTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCTCTCAAATTTAAAGGCGTTATATTTTCTCATGATAGTTTCTGA  495

seq1  TAAGTTCTGATCTCTTAAAACAGCCATTTAGGCTGGAATTGTTTCCAATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTGATCTCTTAAAACAGCCATTTAGGCTGGAATTGTTTCCAATT  545

seq1  TAAAAGTTAACATCATGCCAACAAACATTGTGTTAATGTTCCATTGCAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTTAACATCATGCCAACAAACATTGTGTTAATGTTCCATTGCAGT  595

seq1  CGCTGTAATTAAAGGTGGAGGAAAAAAAAATACTACACACCTGGTGTTGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTAATTAAAGGTGGAGGAAAAAAAAATACTACACACCTGGTGTTGA  645

seq1  AGATGCATAATTTTTCAGACATTGATACAGAACATCACAAAATAAAAGTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCATAATTTTTCAGACATTGATACAGAACATCACAAAATAAAAGTG  695

seq1  ACAGTAACACACTGGAGTGTTTAAAAGACAGAGGACATAACACCCAGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACACACTGGAGTGTTTAAAAGACAGAGGACATAACACCCAGAGT  745

seq1  TCTACAGTTAAAGCAAGAAGACTGAAGCATCGATTGGTTTCTTCCAGTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGTTAAAGCAAGAAGACTGAAGCATCGATTGGTTTCTTCCAGTCA  795

seq1  GACATGCTGTCCTTTGTATATTAATCCTATTTCTTGGCCACCATATTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGCTGTCCTTTGTATATTAATCCTATTTCTTGGCCACCATATTTAT  845

seq1  CTTTCAATACCAGGCACCATGTCTGCCAAATATGAAGGGTTCACAAAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATACCAGGCACCATGTCTGCCAAATATGAAGGGTTCACAAAAAG  895

seq1  TGAATGAATGAACAAATTCAGAGAAGAAATGTCATTTGCAGAATCTCTTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAATGAACAAATTCAGAGAAGAAATGTCATTTGCAGAATCTCTTG  945

seq1  ATGGGTATTCATCCAACCACAGCTTTAATGGAATTGATGGAAGCTAGAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTATTCATCCAACCACAGCTTTAATGGAATTGATGGAAGCTAGAAA  995

seq1  GGCAGGGAAGAGGTCAGAAGAAAAAGCAGTCCTCCATTTCAAAGTTTGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGAAGAGGTCAGAAGAAAAAGCAGTCCTCCATTTCAAAGTTTGGC  1045

seq1  TAGAGCTTCTCACCAGCTCAGGGTTGGGAATTC  1081
      |||||||||||||||||||||||||||||||||
seq2  TAGAGCTTCTCACCAGCTCAGGGTTGGGAATTC  1078