BAC Information

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BAC

Clone NameB6Ng01-247O01
Chromosome13 (Build37)
Map Location 67,494,569 - 67,540,395
singlet/doubletdoublet
Overlap gene2810487A22Rik, Zfp459
Upstream gene2410141K09Rik, C330014B19Rik, Mzf6d, Vmn2r-ps106, LOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456
Downstream geneC330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247O01.bB6Ng01-247O01.g
ACCGA056100GA056101
length9371,101
definitionB6Ng01-247O01.b B6Ng01-247O01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,539,664 - 67,540,395)(67,494,569 - 67,495,672)
sequence
accccccttagtagggggtgatgagggatccccgcggatttcactgtggt
taataagtacatggacatgcgtaaaaaataaaacaactcataaagcatgc
atgcatacatgaaggccttgtttatgctacaccttgagtggagcaactat
tggtaatcgatagctcctgtgggagacagtcggtctgagaggcatctatg
tccagtccgttgtcctaaatccctacacatagaacaagcactagatgaca
ttaagaaaagcccatgaagtagaggataaaatacttttaagggtaagaag
taatagatggaggattgaggagactccgtgaaaacatgcgctgcgcatgt
gttctcccacaacaaataaccaatttcaaaacagttgattttgcacataa
ccaaagttgatctattttagcagtgattacatcacatgactctggctgcc
acagagagacggcatcttcctgggaaggcatcatgcagagatgacacaca
gtcagactcacttagcatctcccacttggctttgtcatgagtaaaacaag
aaagatgagcagtggactcttccatcccactttgtttggtatgcatactg
atcacaactgctttggttactggttatctacaattattaatgttagtaaa
atagtttaacaattgagttatttggccgggcggtggtggtgcacgccttt
aatcccagcacttgggaggcagaggcaggcatatttctgagttcgaggcc
agcctggtctacaaagtgagttccgggacagccagggctacacagagaaa
ccctgtctcgaaaaaaaacaaaaaacaaacaaacaaacaattgagttatt
tggtgtataaaaaaattaaacacaacatatcacttagttgtttttttgtt
ttgggggggggttttttttgtgtttttgtgtgttttt
gaattcatatttgaaattatacctctaataaaaagattaaattatttaaa
ataatgctcatcatataaataaagagggggacaaatgtacaaaaccatga
ggctaggtcacattaggtcagactaagaaacataggcattataggaaaag
agatttaaagaaaatacagtcagtggtcaaatttatttatgttcctaagt
tataaacttctattcaggttagaaaacacttctgacttaaagatgtctat
ctagtcactatgtcttcactaactttcttaaactttaagtacatggaaaa
tggtgtcatgccaagaaatgataattacttatatgccttttcattcttgg
aaaggccagacatactattgtcttttctgtatttttcctgatgaaatgaa
acaaggcacagagactgtctggaggactgacctggactgtggaaaggggc
accacaaagagatcaggacagtgaggcccccagctcctccagggtgtatt
tatgttcaagtttactaagagataagaggtttgcagttcagaaactgtaa
tttttttattaatttaatttttatttcacatgtattggtgttttgctaaa
tgcgtgtctgcatatatgtctgtgtgatggtgtcagatctcctggatttg
aagttacaaacacttgtgagctgccatgtggacgctggcaactgaactct
tcctcgggagttcaccagtgatcttaactggtgagccatttctcaagtcc
caacaattgtaatttttgaggctgaaaattttaatagagataatttcttt
catttattaaaattttaatctgatgagagtcactaatccactgtaagtgc
cacagaaaatatatttaagccatatctggtaatgatgatccactttaatg
agtgacagtcaatgtgcccaaattgtgtttgggattcatgctgaatttca
aatgtaattcattcatagagacatactgaagtaagtgactaataccaatg
ttccattatacagtctctgtacatgtcaaagttagcctaaaacaggagct
caaacaattatagtcacgtaaagtttaactccagtatgcataatatccaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67539664_67540395
seq2: B6Ng01-247O01.b_199_937 (reverse)

seq1  AAAAACA---AAAAAC----AAAAAAACCCCCCCCAAAACAAAAAAACAA  43
      |||||||   ||||||    |||||| |||||||||||||||||||||||
seq2  AAAAACACACAAAAACACAAAAAAAACCCCCCCCCAAAACAAAAAAACAA  50

seq1  CTAAGTGATATGTTGTGTTTAATTTTTTTATACACCAAATAACTCAATTG  93
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGATATGTTGTGTTTAATTTTTTTATACACCAAATAACTCAATTG  100

seq1  TTTGTTTGTTTGTTTTTTGTTTTTTTTCGAGACAGGGTTTCTCTGTGTAG  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTGTTTTTTGTTTTTTTTCGAGACAGGGTTTCTCTGTGTAG  150

seq1  CCCTGGCTGTCCCGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTCCCGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCA  200

seq1  GAAATATGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACC  250

seq1  ACCACCGCCCGGCCAAATAACTCAATTGTTAAACTATTTTACTAACATTA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCGCCCGGCCAAATAACTCAATTGTTAAACTATTTTACTAACATTA  300

seq1  ATAATTGTAGATAACCAGTAACCAAAGCAGTTGTGATCAGTATGCATACC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGTAGATAACCAGTAACCAAAGCAGTTGTGATCAGTATGCATACC  350

seq1  AAACAAAGTGGGATGGAAGAGTCCACTGCTCATCTTTCTTGTTTTACTCA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGTGGGATGGAAGAGTCCACTGCTCATCTTTCTTGTTTTACTCA  400

seq1  TGACAAAGCCAAGTGGGAGATGCTAAGTGAGTCTGACTGTGTGTCATCTC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGCCAAGTGGGAGATGCTAAGTGAGTCTGACTGTGTGTCATCTC  450

seq1  TGCATGATGCCTTCCCAGGAAGATGCCGTCTCTCTGTGGCAGCCAGAGTC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATGCCTTCCCAGGAAGATGCCGTCTCTCTGTGGCAGCCAGAGTC  500

seq1  ATGTGATGTAATCACTGCTAAAATAGATCAACTTTGGTTATGTGCAAAAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGATGTAATCACTGCTAAAATAGATCAACTTTGGTTATGTGCAAAAT  550

seq1  CAACTGTTTTGAAATTGGTTATTTGTTGTGGGAGAACACATGCGCAGCGC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTTTGAAATTGGTTATTTGTTGTGGGAGAACACATGCGCAGCGC  600

seq1  ATGTTTTCACGGAGTCTCCTCAATCCTCCATCTATTACTTCTTACCCTTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCACGGAGTCTCCTCAATCCTCCATCTATTACTTCTTACCCTTA  650

seq1  AAAGTATTTTATCCTCTACTTCATGGGCTTTTCTTAATGTCATCTAGTGC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATTTTATCCTCTACTTCATGGGCTTTTCTTAATGTCATCTAGTGC  700

seq1  TTGTTCTATGTGTAGGGATTTAGGACAACGGACTGGACA  732
      |||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTATGTGTAGGGATTTAGGACAACGGACTGGACA  739

seq1: chr13_67494569_67495672
seq2: B6Ng01-247O01.g_65_1165

seq1  GAATTCATATTTGAAATTATACCTCTAATAAAAAGATTAAATTATTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTTGAAATTATACCTCTAATAAAAAGATTAAATTATTTAAA  50

seq1  ATAATGCTCATCATATAAATAAAGAGGGGGACAAATGTACAAAACCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCTCATCATATAAATAAAGAGGGGGACAAATGTACAAAACCATGA  100

seq1  GGCTAGGTCACATTAGGTCAGACTAAGAAACATAGGCATTATAGGAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGTCACATTAGGTCAGACTAAGAAACATAGGCATTATAGGAAAAG  150

seq1  AGATTTAAAGAAAATACAGTCAGTGGTCAAATTTATTTATGTTCCTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTAAAGAAAATACAGTCAGTGGTCAAATTTATTTATGTTCCTAAGT  200

seq1  TATAAACTTCTATTCAGGTTAGAAAACACTTCTGACTTAAAGATGTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAACTTCTATTCAGGTTAGAAAACACTTCTGACTTAAAGATGTCTAT  250

seq1  CTAGTCACTATGTCTTCACTAACTTTCTTAAACTTTAAGTACATGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCACTATGTCTTCACTAACTTTCTTAAACTTTAAGTACATGGAAAA  300

seq1  TGGTGTCATGCCAAGAAATGATAATTACTTATATGCCTTTTCATTCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTCATGCCAAGAAATGATAATTACTTATATGCCTTTTCATTCTTGG  350

seq1  AAAGGCCAGACATACTATTGTCTTTTCTGTATTTTTCCTGATGAAATGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCCAGACATACTATTGTCTTTTCTGTATTTTTCCTGATGAAATGAA  400

seq1  ACAAGGCACAGAGACTGTCTGGAGGACTGACCTGGACTGTGGAAAGGGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCACAGAGACTGTCTGGAGGACTGACCTGGACTGTGGAAAGGGGC  450

seq1  ACCACAAAGAGATCAGGACAGTGAGGCCCCCAGCTCCTCCAGGGTGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAGAGATCAGGACAGTGAGGCCCCCAGCTCCTCCAGGGTGTATT  500

seq1  TATGTTCAAGTTTACTAAGAGATAAGAGGTTTGCAGTTCAGAAACTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCAAGTTTACTAAGAGATAAGAGGTTTGCAGTTCAGAAACTGTAA  550

seq1  TTTTTTTATTAATTTAATTTTTATTTCACATGTATTGGTGTTTTGCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTATTAATTTAATTTTTATTTCACATGTATTGGTGTTTTGCTAAA  600

seq1  TGCGTGTCTGCATATATGTCTGTGTGATGGTGTCAGATCTCCTGGATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGTCTGCATATATGTCTGTGTGATGGTGTCAGATCTCCTGGATTTG  650

seq1  AAGTTACAAACACTTGTGAGCTGCCATGTGGACGCTGGCAACTGAACTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACAAACACTTGTGAGCTGCCATGTGGACGCTGGCAACTGAACTCT  700

seq1  TCCTCGGGAGTTCACCAGTGATCTTAACTGGTGAGCCATTTCTCAAGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGGGAGTTCACCAGTGATCTTAACTGGTGAGCCATTTCTCAAGTCC  750

seq1  CAACAATTGTAATTTTTGAGGCTGAAAATTTTAATAGAGATAATTTCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATTGTAATTTTTGAGGCTGAAAATTTTAATAGAGATAATTTCTTT  800

seq1  CATTTATTAAAATTTTAATCTGATGAGAGTCACTAATCCACTGTAAGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTAAAATTTTAATCTGATGAGAGTCACTAATCCACTGTAAGTGC  850

seq1  CACAGAAAATATATTTAAGCCATATCTGGTAATGATGATCCAC-TTAATG  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CACAGAAAATATATTTAAGCCATATCTGGTAATGATGATCCACTTTAATG  900

seq1  AGTGACAGTCAATGTGCCCAAATTGTGTTT-GGATTCATGCTGAA-TTCA  947
      |||||||||||||||||||||||||||||| |||||||||||||| ||||
seq2  AGTGACAGTCAATGTGCCCAAATTGTGTTTGGGATTCATGCTGAATTTCA  950

seq1  AATGTAATTCATTCATAGAGACAATACTGAAGTAAGTGACTAATACCAAT  997
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AATGTAATTCATTCATAGAGAC-ATACTGAAGTAAGTGACTAATACCAAT  999

seq1  GTTCCATTATACAGTCCTCTGTACATGTCAAAGTTTAGCCTAAAACAGGG  1047
      ||||||||||||||| ||||||||||||||||| ||||||||||||| ||
seq2  GTTCCATTATACAGT-CTCTGTACATGTCAAAG-TTAGCCTAAAACA-GG  1046

seq1  AGCTCAAACAAATTTATAGTCACCTTAAAGTTT-ACT-CAGTATGGCATA  1095
      |||||||||||  ||||||||| | |||||||| ||| |||||| |||||
seq2  AGCTCAAACAA--TTATAGTCA-CGTAAAGTTTAACTCCAGTAT-GCATA  1092

seq1  ATATTCAAA  1104
      |||| ||||
seq2  ATATCCAAA  1101