BAC Information

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BAC

Clone NameB6Ng01-248K16
Chromosome13 (Build37)
Map Location 7,799,946 - 7,801,104
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667611, EG623516
Downstream geneLOC791083, LOC382722, Adarb2, EG666941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-248K16.bB6Ng01-248K16.g
ACCGA056684GA056685
length1,1641,168
definitionB6Ng01-248K16.b B6Ng01-248K16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccacattttatgggggttatttgatt
tttctggagtccatcctcttgagttctttatatatattggatattagtcc
cctatctgatttaagataggtaaagatcctttcccaatctgttggtggac
tttttgtcttattgacggtgtctttttccttgcagaagctttgcagtttc
atgaggtcccatttgtcaatcctcgatcttacagcacaagccattgctct
tctattcaggaattttttccctgtgcccatatcttcgagacatttcccca
ctttctcctctataagtttcagtgtctctggttttatgtgaagttccttg
atccacttagatttgaccttagtacaaggagagaggaatgggtcgattcg
cattcttctacatgataacaaccagttgtgccagcaccatttgttgaaaa
tgctgtctttcttccactggatggttttagctcccttgtcgaagatcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattttattccattg
gtctacttgtctgtcactataccagtaccatgcagttttttaacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggtacttt
tatccttgagaagagcttttgctatcctaggttttttgttattccagatg
aatttgcagattgctctttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatcttccatattc
tgagatcttcttttaatttttttcttcagagacttgaagttttattcata
cagatctttcacttccttagttagagtcacaccaagatattttatattat
tttgtgactattgagaagggtgttgtttcctaatttctttctcagctgtt
tatctttgtgtagagaacggccatgactgttgagtttaatttattccagc
tacttcactgaagctgtttatcagttaggagttctctgggtgaacttaag
gtcacttaattataaattcattcatctgcaacggtaaattgactcactgt
ttccaatctgatat

gaattccatattcatttgatcctcaattccccaattcaactcatccaagt
gccacacacttcccctctgttctaacattttattttccctacaaaagcta
atttgtgccatccaagtagtttgggtgtgtggttgactaaactctttgaa
aaaaaatccttcttccccctacagctaacacttttcaattgctcctatac
tacgtgtagaacccagtgcctgactccctttttcatgctggaatttagtc
tagcttaggtttccataggtcttgtgtatggtgtcagattccctgatgtg
ttcaaaaggcactgtttcttcataggtgtctatatccactggctcttaca
ctatttttctccttcttaatcaattatccctgtgtctttggaggagggat
aatggtttatatgttctgtttatggctgagaattctgcagtctctcattt
tctgtaccttggccagctgtgggtctgtatgctgttcagcatcgattgca
aacagaagcttctgcattgaagattgagagaaaacatattcgaatagtaa
gtcactggaattggtttcctatcatttctgtctgacataataattgtaag
tgggttctctcctaaaatgtttacacacatatatatgaaaaagaaaactg
tttattaatcagaattttcagttttaaacatttggcaattacgcaagtta
tcttaaagttgggaagaagttatgtgtcccaaaggggcacttaaaatgcc
attcagcagtgtttgttgagactacccaagatcaggccgcatagcacggt
gatgaaagccagccatctggttctggatttcataaagatgtcaactgctc
caaaatcacattgtgaccttaaacaaggatcacatctcatgattcaaatt
ctgtaactgctaatgagagtattgaagaataattgagatatcactacgac
cactgactaatgttgtggatcaaagagaattattgacaatattagcagtt
aattattcatctttcaaatacttaccttgaagtcattggaaatttatata
ataataaaacccattgtaggagttggtagccaaaggccaaggttatgaac
aagccttctgaaattcgtcaaaaaactaatcccaatcgactaacctatcg
aatacctgaagcagcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_7799946_7801104
seq2: B6Ng01-248K16.g_71_1238 (reverse)

seq1  AGTGCTGCTTCAGGTGTTTTGTTTTGTTTTGTTTTGTTGGGTTTGTTTTT  50
      |||||||||||||||  || | |  |  ||  |   ||||| ||  ||||
seq2  AGTGCTGCTTCAGGT-ATTCGATAGG--TTAGTCGATTGGGATTAGTTTT  47

seq1  TGGACG-ATTTCAG-AGCCTTG-TCATAACCTTG--CTTTGGCTACCAAC  95
      | |||| ||||||| || |||| |||||||||||  ||||||||||||||
seq2  TTGACGAATTTCAGAAGGCTTGTTCATAACCTTGGCCTTTGGCTACCAAC  97

seq1  TCCTAC-ATGG--TTTATTATATTATAAATTTCAATTGACTTCAA-GTAA  141
      |||||| ||||  ||||||||  |||||||||| | ||||||||| ||||
seq2  TCCTACAATGGGTTTTATTATTATATAAATTTCCAATGACTTCAAGGTAA  147

seq1  GTATTTTGAAAGATG-ATAA-TAACTGCT-ATA-TGTTCATTATTCTCTT  187
      ||| ||||||||||| |||| |||||||| ||| |||  || ||||||||
seq2  GTA-TTTGAAAGATGAATAATTAACTGCTAATATTGTCAATAATTCTCTT  196

seq1  TGATCCAC-ACATTAGTCAGT-GTCGTAGTGATTATCTCAATTATTC-TC  234
      |||||||| |||||||||||| |||||||||| |||||||||||||| ||
seq2  TGATCCACAACATTAGTCAGTGGTCGTAGTGA-TATCTCAATTATTCTTC  245

seq1  AATACTCTCATTTAGCAGTTACAGAATTTGAATCATGAGATGTGATCCTT  284
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AATACTCTCA-TTAGCAGTTACAGAATTTGAATCATGAGATGTGATCCTT  294

seq1  GTTTAAGGTCACAATGTTGATTTTGGAGCAGTTGACATCTTTATGAAATC  334
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GTTTAAGGTCACAATG-TGATTTTGGAGCAGTTGACATCTTTATGAAATC  343

seq1  CAGAACCAGATGGCTGGCTTTCATCACCGTGCTATGCGGCCTGATCTTGG  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAGATGGCTGGCTTTCATCACCGTGCTATGCGGCCTGATCTTGG  393

seq1  GTAGTCTCAACAAACACTGCTGAATGGCATTTTAAGTGCCCCTTTGGGAC  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTCAACAAACACTGCTGAATGGCATTTTAAGTGCCCCTTTGGGAC  443

seq1  ACATAACTTCTTCCCAACTTTAAGATAACTTGCGTAATTGCCAAATGTTT  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACTTCTTCCCAACTTTAAGATAACTTGCGTAATTGCCAAATGTTT  493

seq1  AAAACTGAAAATTCTGATTAATAAACAGTTTTCTTTTTCATATATATGTG  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAAAATTCTGATTAATAAACAGTTTTCTTTTTCATATATATGTG  543

seq1  TGTAAACATTTTAGGAGAGAACCCACTTACAATTATTATGTCAGACAGAA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATTTTAGGAGAGAACCCACTTACAATTATTATGTCAGACAGAA  593

seq1  ATGATAGGAAACCAATTCCAGTGACTTACTATTCGAATATGTTTTCTCTC  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAGGAAACCAATTCCAGTGACTTACTATTCGAATATGTTTTCTCTC  643

seq1  AATCTTCAATGCAGAAGCTTCTGTTTGCAATCGATGCTGAACAGCATACA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCAATGCAGAAGCTTCTGTTTGCAATCGATGCTGAACAGCATACA  693

seq1  GACCCACAGCTGGCCAAGGTACAGAAAATGAGAGACTGCAGAATTCTCAG  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACAGCTGGCCAAGGTACAGAAAATGAGAGACTGCAGAATTCTCAG  743

seq1  CCATAAACAGAACATATAAACCATTATCCCTCCTCCAAAGACACAGGGAT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAACAGAACATATAAACCATTATCCCTCCTCCAAAGACACAGGGAT  793

seq1  AATTGATTAAGAAGGAGAAAAATAGTGTAAGAGCCAGTGGATATAGACAC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATTAAGAAGGAGAAAAATAGTGTAAGAGCCAGTGGATATAGACAC  843

seq1  CTATGAAGAAACAGTGCCTTTTGAACACATCAGGGAATCTGACACCATAC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAGAAACAGTGCCTTTTGAACACATCAGGGAATCTGACACCATAC  893

seq1  ACAAGACCTATGGAAACCTAAGCTAGACTAAATTCCAGCATGAAAAAGGG  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGACCTATGGAAACCTAAGCTAGACTAAATTCCAGCATGAAAAAGGG  943

seq1  AGTCAGGCACTGGGTTCTACACGTAGTATAGGAGCAATTGAAAAGTGTTA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGCACTGGGTTCTACACGTAGTATAGGAGCAATTGAAAAGTGTTA  993

seq1  GCTGTAGGGGGAAGAAGGATTTTTTTTCAAAGAGTTTAGTCAACCACACA  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGGGGAAGAAGGATTTTTTTTCAAAGAGTTTAGTCAACCACACA  1043

seq1  CCCAAACTACTTGGATGGCACAAATTAGCTTTTGTAGGGAAAATAAAATG  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAACTACTTGGATGGCACAAATTAGCTTTTGTAGGGAAAATAAAATG  1093

seq1  TTAGAACAGAGGGGAAGTGTGTGGCACTTGGATGAGTTGAATTGGGGAAT  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAACAGAGGGGAAGTGTGTGGCACTTGGATGAGTTGAATTGGGGAAT  1143

seq1  TGAGGATCAAATGAATATGGAATTC  1159
      |||||||||||||||||||||||||
seq2  TGAGGATCAAATGAATATGGAATTC  1168


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