BAC Information

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BAC

Clone NameB6Ng01-250N22
Chromosome13 (Build37)
Map Location 80,519,623 - 80,520,791
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250N22.bB6Ng01-250N22.g
ACCGA058294GA058295
length1,2041,160
definitionB6Ng01-250N22.b B6Ng01-250N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagcaatatgggtaatgttaaattgttgacagaaagtttgaaat
gcttgaatgtaacagccatttccatatctgttttaatatgatttggaaca
accaggatagaaaaacaatataggcaattattaattacatttttagttgc
ttctcttgtgaaagcaattacaactagaaagcctgaaaaggtgtcaggtc
acatgtacatactctaatttttcaaaatcaaaaatatgagtaacatccat
ttgccataattgattaggtataagtccttgaggattaacaccattatgtg
gtacaggtagaaactgaggacattcctaattatggccaatgtcagattac
tgcttgaagtccatttccttgtccttggccaatatcagactcctgccaag
cagttccacacagaggctctccacaagtatgtgccccagatagttggcct
caagtgtacagagctgggccgtttttagctaaagctcagtagctcagttg
actcaatccttgtagcacgtgccgtgttacccttgacaggtgtccaaata
agagctggtatcagaaggtcatctgcttattggaaaagagtaatttaggg
gtgtgtttgctggtactaacccaagtctgcatgtagtgccacattgaagt
tggtgggtgagttcttgaatccctgaggcaggcatgtccaagtcagttgt
ctattgaagctcctttccgagtcctgccattcaaaggtaaacagggggtg
acttttggatgccaggtccaggctaaagaaggcatcttcaggttaagcac
agtacatgtagcctgctcaggagggagctactatactatatactactcaa
tagtgtataatggtttggaacggtggggtgaatatcctcccccagctggt
ttatttccctcaagccctgcacaggttggtagccacaggaatgaggcttc
ttgactggaagacagagagtgttccatgctgatcagcagggatcagatcc
taacttgccagattgatgtactgattgtctccacccagactcctcttggc
acttgatattggttgctctgactggaatatcccaaacctactgatattga
tgggatcttagaatgacagtctgaattgaatttcctcctaacgacttgga
tctagttcaaacttctgagacagtggttttgtgtgaagaacacattgttc
ttga
gaattcatttgcataccaatacccagaatgcttttccagctcactgctat
ttaatctaagtcagctggtgtcagagccctgggaacaactgaagaatttt
gacatgcttctttgtgcatgcatcaagttccttttctgcatgaagtgcac
agtgaaacctcaaattttcatctttaatatgaatttttctataaagcttt
gaatattttaaaatccattttcaacctttctttaaacattcttataatac
aaggctaaaattacaattttaataatcttttaattgataagcacattaca
ttgagtcatttgaatgcaaggaggagacttagaagggaacatttttccat
tttgaggaggtcaaatggaagataattttggaactttggaaaaatatgta
ggtctggtacttgaaagatgatagtgtgtcctaaaaggcaagggtgagaa
aaatctaagaaaaattagaataatgtagactgacagcaagtatgagtttg
aaagtttacattttctggaatggaccaagtgctaaagcaaagttaattat
aaccacgtgacagtaataaagattacattaatgtattcataatagcaata
tttttgttgacaagattttaaaggtcctaatttttattcacatttgcaat
tattaaaacaaaattatcccataacattgaaatagcaagggagatgaaag
tagagaaatgagtggggtttggttaaataaaattgctgtgtgaagataat
tgcttactatgtacaatttagtgcatggaggttcattctactatgtctat
gtaggttttgatctacttagaatttttgcaaataagttacagaaatgagc
aagagattataaataaaaaggtattgagagatgaaaacgtaagtcacaag
aaacctaggcatttgagtttaatctgtgctttgttccatcaaaaagccgt
aaaataagtctttagctattttattatacatacagtgcaaagcaatttgc
taatataaagtagaaagagagcttgcagatatctcctgttctttttcttt
ccattgctcactgctatgctatctcttattgaacactcttctagacttaa
cgcatagcattccaaggtttctcttcataaactgcaatctgaatcttcta
gtagtttggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80519623_80520791
seq2: B6Ng01-250N22.g_67_1226 (reverse)

seq1  GCCAAACTACTAGAAGA-TCAGA-TGCAATTTTTATGAAAAGGAA-CTTT  47
      ||||||||||||||||| ||||| ||||   |||||||| || || ||| 
seq2  GCCAAACTACTAGAAGATTCAGATTGCA--GTTTATGAAGAGAAACCTTG  48

seq1  GAATGCTATGGTGTAGGTTCTAGAAGAGTG-TCAAT-AGAGATAGCATAA  95
      ||||||||||   || | |||||||||||| ||||| |||||||||||| 
seq2  GAATGCTATGCGTTAAG-TCTAGAAGAGTGTTCAATAAGAGATAGCATAG  97

seq1  CAGTGAAAACAAATGGAAAAGAAAAAGAAACAGGAGATATCTGCAAGCCT  145
      |||||   |  ||||| |||||||||| ||||||||||||||||||||  
seq2  CAGTG---AGCAATGG-AAAGAAAAAG-AACAGGAGATATCTGCAAGC--  140

seq1  TCTCTTTTCTACTTTATTAATTAGCAAATTGCTTTGCACTGTTATGTATA  195
      |||| ||||||||||||  |||||||||||||||||||||| ||||||||
seq2  TCTC-TTTCTACTTTAT--ATTAGCAAATTGCTTTGCACTG-TATGTATA  186

seq1  ATAAAATAGCTAAAGACTTATTTTACGGCTTTTTGATGGAACAAAGCACA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAGCTAAAGACTTATTTTACGGCTTTTTGATGGAACAAAGCACA  236

seq1  GATTAAACTCAAATGCCTAGGTTTCTTGTGACTTACGTTTTCATCTCTCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACTCAAATGCCTAGGTTTCTTGTGACTTACGTTTTCATCTCTCA  286

seq1  ATACCTTTTTATTTATAATCTCTTGCTCATTTCTGTAACTTATTTGCAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTTTTATTTATAATCTCTTGCTCATTTCTGTAACTTATTTGCAAA  336

seq1  AATTCTAAGTAGATCAAAACCTACATAGACATAGTAGAATGAACCTCCAT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTAAGTAGATCAAAACCTACATAGACATAGTAGAATGAACCTCCAT  386

seq1  GCACTAAATTGTACATAGTAAGCAATTATCTTCACACAGCAATTTTATTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAAATTGTACATAGTAAGCAATTATCTTCACACAGCAATTTTATTT  436

seq1  AACCAAACCCCACTCATTTCTCTACTTTCATCTCCCTTGCTATTTCAATG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACCCCACTCATTTCTCTACTTTCATCTCCCTTGCTATTTCAATG  486

seq1  TTATGGGATAATTTTGTTTTAATAATTGCAAATGTGAATAAAAATTAGGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGATAATTTTGTTTTAATAATTGCAAATGTGAATAAAAATTAGGA  536

seq1  CCTTTAAAATCTTGTCAACAAAAATATTGCTATTATGAATACATTAATGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAAATCTTGTCAACAAAAATATTGCTATTATGAATACATTAATGT  586

seq1  AATCTTTATTACTGTCACGTGGTTATAATTAACTTTGCTTTAGCACTTGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTATTACTGTCACGTGGTTATAATTAACTTTGCTTTAGCACTTGG  636

seq1  TCCATTCCAGAAAATGTAAACTTTCAAACTCATACTTGCTGTCAGTCTAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCCAGAAAATGTAAACTTTCAAACTCATACTTGCTGTCAGTCTAC  686

seq1  ATTATTCTAATTTTTCTTAGATTTTTCTCACCCTTGCCTTTTAGGACACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTAATTTTTCTTAGATTTTTCTCACCCTTGCCTTTTAGGACACA  736

seq1  CTATCATCTTTCAAGTACCAGACCTACATATTTTTCCAAAGTTCCAAAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATCTTTCAAGTACCAGACCTACATATTTTTCCAAAGTTCCAAAAT  786

seq1  TATCTTCCATTTGACCTCCTCAAAATGGAAAAATGTTCCCTTCTAAGTCT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCATTTGACCTCCTCAAAATGGAAAAATGTTCCCTTCTAAGTCT  836

seq1  CCTCCTTGCATTCAAATGACTCAATGTAATGTGCTTATCAATTAAAAGAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGCATTCAAATGACTCAATGTAATGTGCTTATCAATTAAAAGAT  886

seq1  TATTAAAATTGTAATTTTAGCCTTGTATTATAAGAATGTTTAAAGAAAGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAATTGTAATTTTAGCCTTGTATTATAAGAATGTTTAAAGAAAGG  936

seq1  TTGAAAATGGATTTTAAAATATTCAAAGCTTTATAGAAAAATTCATATTA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATGGATTTTAAAATATTCAAAGCTTTATAGAAAAATTCATATTA  986

seq1  AAGATGAAAATTTGAGGTTTCACTGTGCACTTCATGCAGAAAAGGAACTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGAAAATTTGAGGTTTCACTGTGCACTTCATGCAGAAAAGGAACTT  1036

seq1  GATGCATGCACAAAGAAGCATGTCAAAATTCTTCAGTTGTTCCCAGGGCT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCATGCACAAAGAAGCATGTCAAAATTCTTCAGTTGTTCCCAGGGCT  1086

seq1  CTGACACCAGCTGACTTAGATTAAATAGCAGTGAGCTGGAAAAGCATTCT  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACACCAGCTGACTTAGATTAAATAGCAGTGAGCTGGAAAAGCATTCT  1136

seq1  GGGTATTGGTATGCAAATGAATTC  1169
      ||||||||||||||||||||||||
seq2  GGGTATTGGTATGCAAATGAATTC  1160