BAC Information

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BAC

Clone NameB6Ng01-251G02
Chromosome13 (Build37)
Map Location 6,929,587 - 6,930,708
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039388, LOC100039395, Pitrm1, Pfkp, LOC100039532
Downstream geneLOC667611, EG623516
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251G02.bB6Ng01-251G02.g
ACCGA058655GA058656
length1,1291,178
definitionB6Ng01-251G02.b B6Ng01-251G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatattcttcatttaaaatactaaaaagcaagggaagggtttg
ttcttcattatgaaataattctactataattgcttgctcagtcaagtctt
ttgcaaaacagacacatgcaattgattttgtagaatgattgaaattctgt
aaaggcaggaaagaagcttttgatttcatggttgagctgaggaaacgagg
aacatccttgcctaacacataggaaattattttattcataaggagataga
gccacactggaagactgatggtaaagctgccaatatggcccaacagacct
ggtagcacagctaggaagcggtgagttctaatttaatttaataaagccat
aatgtacctattttcttcttaagtagaagagctttgtggaccatagacac
aaggtagaattcatccaccaagtaagaatgtgttttccctaaggaagcag
aacaattatcaaatattcctaacatgaaaataatttgacaatagtatcca
cagacccagggaaaatgctggggtctgagtgtctgtgctctgctcaaatt
aaaaaactaaaacacaactccagtattggggaattggttaattgggtaaa
acactcagtttggattcccagaatctatataaaagcaggaccagataggc
ctacctagtcatatgtagttccaccactcctatggttaggtaggagaatt
acctgggagctcaagggctagctggtctggggtacacagtaatatacaag
agaaactgtctcaaataaggtagaaagtgttggctgacagccaaagctgt
catctgatctctgtatgcataaatctgaatgcacaggagcacactaatgc
acagaaatatacatgaacacccaaaagatgcttcttttctacacactaca
aaactgttcccaattgatagtattagagagagaaagactttgtgggaatt
ctttagaatagaaaggtggaggcttcatacaaggattgctgttcttatta
agattccccccactcctgagcatatacctaggaataaaaatatcttgtga
ataggatagcagatacccagggtaccctgggatccacaagtttcttgtaa
catatacttctccagacgtgtacacacac

gaattctggcgcacaaattttcacaggggaaactataaacatggacaatt
ttttcatgaaagaaaactatcttatgtttcatgcatttctatatattttt
ttaaattttatttctttttttttacactccagattttattcccctcctgg
acacctcctacctggccccctgtctccacaaggatgtcccgacccctaca
ccctacaccccaccagacctttaaactccctagggcctccagtctcttga
gggttaggtgcatcatctctgaatgaacacagaggcagtcctgggctgta
tatgcgatgggggactcaaatcagctggtgatctaatctatctgtttggt
ggttcagtgtttgagagaactcggggtccagacttattgagactgctggt
cctcctacaggatcacccttctcttcaaattctttcagacttccctaatt
caacaactggagtcagctgcttctgtccattggttgggtgcaaatgtcta
catctgattctttcaactgtgtgttgggtcttttggagggcagtcaagac
agatcactttttgtgagctgtccatagcctccgtaatagtgtcagccctt
ggggtctccccttgatgtgggtcccacttgggcctgaatgaaactggaaa
acttctgtaatgcaaaggacatagtcaataagacaaatcggcaacctaca
gattggggaaaaaaaaaaaaacttcagtaaccccatatctgatagagggc
taatataaaaaatatataaagaactcaagaagctaaccaccaaaaaccca
aacaactcaattaaactaaactgagaattcacagcagagaaatctcaaat
ggctgagaagcacctaaagaaacattcaaactccttagtgatcagagaac
tgcaatcaaaacaaccccgagattccactgtacaccaatcagaatgggct
aagatcaaaacctcagtgacaacgcatgttggagaggatgtggagaaaga
tgatccattgcctggtgagattgcaactgttcactcactcttgaaatcat
ctgaagttccttcagaaatgagtagatctacttgaaggttcagcatacca
ctcttggatatacctaagatgcccaccatgtccatagggtcatgttcact
actgtacatacgcaccttaatgtcgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_6929587_6930708
seq2: B6Ng01-251G02.b_50_1178

seq1  GAATTCTCATATTCTTCATTTAAAATACTAAAAAGCAAGGGAAGGGTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATATTCTTCATTTAAAATACTAAAAAGCAAGGGAAGGGTTTG  50

seq1  TTCTTCATTATGAAATAATTCTACTATAATTGCTTGCTCAGTCAAGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTATGAAATAATTCTACTATAATTGCTTGCTCAGTCAAGTCTT  100

seq1  TTGCAAAACAGACACATGCAATTGATTTTGTAGAATGATTGAAATTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAACAGACACATGCAATTGATTTTGTAGAATGATTGAAATTCTGT  150

seq1  AAAGGCAGGAAAGAAGCTTTTGATTTCATGGTTGAGCTGAGGAAACGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGAAAGAAGCTTTTGATTTCATGGTTGAGCTGAGGAAACGAGG  200

seq1  AACATCCTTGCCTAACACATAGGAAATTATTTTATTCATAAGGAGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCTTGCCTAACACATAGGAAATTATTTTATTCATAAGGAGATAGA  250

seq1  GCCACACTGGAAGACTGATGGTAAAGCTGCCAATATGGCCCAACAGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACTGGAAGACTGATGGTAAAGCTGCCAATATGGCCCAACAGACCT  300

seq1  GGTAGCACAGCTAGGAAGCGGTGAGTTCTAATTTAATTTAATAAAGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCACAGCTAGGAAGCGGTGAGTTCTAATTTAATTTAATAAAGCCAT  350

seq1  AATGTACCTATTTTCTTCTTAAGTAGAAGAGCTTTGTGGACCATAGACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTACCTATTTTCTTCTTAAGTAGAAGAGCTTTGTGGACCATAGACAC  400

seq1  AAGGTAGAATTCATCCACCAAGTAAGAATGTGTTTTCCCTAAGGAAGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGAATTCATCCACCAAGTAAGAATGTGTTTTCCCTAAGGAAGCAG  450

seq1  AACAATTATCAAATATTCCTAACATGAAAATAATTTGACAATAGTATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTATCAAATATTCCTAACATGAAAATAATTTGACAATAGTATCCA  500

seq1  CAGACCCAGGGAAAATGCTGGGGTCTGAGTGTCTGTGCTCTGCTCAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCAGGGAAAATGCTGGGGTCTGAGTGTCTGTGCTCTGCTCAAATT  550

seq1  AAAAAACTAAAACACAACTCCAGTATTGGGGAATTGGTTAATTGGGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTAAAACACAACTCCAGTATTGGGGAATTGGTTAATTGGGTAAA  600

seq1  ACACTCAGTTTGGATTCCCAGAATCTATATAAAAGCAGGACCAGATAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGTTTGGATTCCCAGAATCTATATAAAAGCAGGACCAGATAGGC  650

seq1  CTACCTAGTCATATGTAGTTCCACCACTCCTATGGTTAGGTAGGAGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAGTCATATGTAGTTCCACCACTCCTATGGTTAGGTAGGAGAATT  700

seq1  ACCTGGGAGCTCAAGGGCTAGCTGGTCTGGGGTACACAGTAATATACAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGAGCTCAAGGGCTAGCTGGTCTGGGGTACACAGTAATATACAAG  750

seq1  AGAAACTGTCTCAAATAAGGTAGAAAGTGTTGGCTGACAGCCAAAGCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTGTCTCAAATAAGGTAGAAAGTGTTGGCTGACAGCCAAAGCTGT  800

seq1  CATCTGATCTCTGTATGCATAAATCTGAATGCACAGGAGCACACTAATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATCTCTGTATGCATAAATCTGAATGCACAGGAGCACACTAATGC  850

seq1  ACAGAAATATACATGAACACCCAAAAGATGCTTCTTTTCTACACACTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATATACATGAACACCCAAAAGATGCTTCTTTTCTACACACTACA  900

seq1  AAACTGTTCCCAATTGATAGTATTAGAGAGAGAAAGACTTTGTGGGAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTTCCCAATTGATAGTATTAGAGAGAGAAAGACTTTGTGGGAATT  950

seq1  CTTTAGAATAG-AAGGTGGAGGCTTCATACAAGGATTGCTGTTCTTATTA  999
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  CTTTAGAATAGAAAGGTGGAGGCTTCATACAAGGATTGCTGTTCTTATT-  999

seq1  AAGATT-CCCCCACTCCTGAGCATATACCTAGGA--TAAAATATC-TGTG  1045
      |||||| |||||||||||||||||||||||||||   |||||||| ||||
seq2  AAGATTCCCCCCACTCCTGAGCATATACCTAGGAATAAAAATATCTTGTG  1049

seq1  AATAGGATAGCAGATA-CCAAGGTACC--TGGATCCACAAGTTTCCTGTA  1092
      |||||||||||||||| ||| ||||||   ||||||||||||||| ||||
seq2  AATAGGATAGCAGATACCCAGGGTACCCTGGGATCCACAAGTTTCTTGTA  1099

seq1  ACATATACTTCTCCACACGTGTACACACAC  1122
      ||||||||||||||| ||||||||||||||
seq2  ACATATACTTCTCCAGACGTGTACACACAC  1129


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