BAC Information

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BAC

Clone NameB6Ng01-251M18
Chromosome13 (Build37)13 (Build37)
Map Location 68,456,586 - 68,457,78468,523,746 - 68,523,938
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneE130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245
Downstream geneEG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251M18.bB6Ng01-251M18.g
ACCGA058961GA058962
length1,210227
definitionB6Ng01-251M18.b B6Ng01-251M18.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,456,586 - 68,457,784)(68,523,746 - 68,523,938)
sequence
gaattccaagcccaaggtcttgctcaaggacattctagaactattagaac
actggtggaaggctttagctatgtcagaattcaatcttaaaagacactta
taataagaaaatactgaaagagagcacgtggatccatacactagactaat
gcggcaatggaaaattaatgtatgggtcaaagggaacgccagactccaag
aagagaggttccttgaagctctttgcctcatgagtgagtatcaagccact
cagcttaagagcacgtgacatatgcttggggttgagttgataccaccgtt
gtcctctgcccatgtggcaaaaacatttctcttaatccaagatatttctg
tttccagagtgtactgagatgagctaagtgatcatccagaggtctgaaat
agctgtgaccacacagctgctgaaatgatatttggacagatcctaattct
attgttccagaaaatcatttgggacacatttcagaaataccaagcagaaa
aagtgaggagcttttcataccctgagaccggttttgagggaccacgcatg
acgtgatttaactcacagtgcttaaaaccttggctttaacctgaatcatg
gggaaggccgatggattctagatccaagcttagtcagatccaaggggcag
aggcagacaaaactggaagaattgctaatgtgtaggggtggatagtaccg
acagaacacagaaggcagcaaacatcctctgaatcaatcgcctgacatgc
cgtttcatatttcatatgcccagtgttggtgtgtcacggaggacactgga
tgcagaagatactcttcaggaattctgcatcctccattataggcacgaaa
ccagtagcagctattttgttggagatggtatcctaaacccttaaagcttt
atttggctactttagtcaactctaccactctcaggcaagcgttatatccc
catactcatgaaaagctgagaccacagagaaatttaagcagcttacccag
gcccactcagtgaacagtagtataggctagcttgtttctatgaccttgcc
ctgcccatcctatccatcctttgtagaagaacttagcaagccacttgagg
agccctccaagctgttagctgccattatatagaatgactcatacaattcc
catatagcagttggaatggcgacttcggttatctccagctctatagcaga
aattaaattc
tttgtttagctcttttaatagggtcatttgattctcgggagtcttgagga
gtacacttggctccagctgcatatgtagcataggatgaccttgtcaggca
tcaatggaaggagaggtccttggtcctatgaaggctggatagatgcccca
gtatagggaaatccaaggtggagaggttggagttggtggttgggtggagg
aacaccctctagtatcacggggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68456586_68457784
seq2: B6Ng01-251M18.b_50_1259

seq1  GAATTCCAAGCCCAAGGTCTTGCTCAAGGACATTCTAGAACTATTAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCCCAAGGTCTTGCTCAAGGACATTCTAGAACTATTAGAAC  50

seq1  ACTGGTGGAAGGCTTTAGCTATGTCAGAATTCAATCTTAAAAGACACTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGGAAGGCTTTAGCTATGTCAGAATTCAATCTTAAAAGACACTTA  100

seq1  TAATAAGAAAATACTGAAAGAGAGCACGTGGATCCATACACTAGACTAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGAAAATACTGAAAGAGAGCACGTGGATCCATACACTAGACTAAT  150

seq1  GCGGCAATGGAAAATTAATGTATGGGTCAAAGGGAACGCCAGACTCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCAATGGAAAATTAATGTATGGGTCAAAGGGAACGCCAGACTCCAAG  200

seq1  AAGAGAGGTTCCTTGAAGCTCTTTGCCTCATGAGTGAGTATCAAGCCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGTTCCTTGAAGCTCTTTGCCTCATGAGTGAGTATCAAGCCACT  250

seq1  CAGCTTAAGAGCACGTGACATATGCTTGGGGTTGAGTTGATACCACCGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTAAGAGCACGTGACATATGCTTGGGGTTGAGTTGATACCACCGTT  300

seq1  GTCCTCTGCCCATGTGGCAAAAACATTTCTCTTAATCCAAGATATTTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGCCCATGTGGCAAAAACATTTCTCTTAATCCAAGATATTTCTG  350

seq1  TTTCCAGAGTGTACTGAGATGAGCTAAGTGATCATCCAGAGGTCTGAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAGTGTACTGAGATGAGCTAAGTGATCATCCAGAGGTCTGAAAT  400

seq1  AGCTGTGACCACACAGCTGCTGAAATGATATTTGGACAGATCCTAATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGACCACACAGCTGCTGAAATGATATTTGGACAGATCCTAATTCT  450

seq1  ATTGTTCCAGAAAATCATTTGGGACACATTTCAGAAATACCAAGCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCCAGAAAATCATTTGGGACACATTTCAGAAATACCAAGCAGAAA  500

seq1  AAGTGAGGAGCTTTTCATACCCTGAGACCGGTTTTGAGGGACCACGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGGAGCTTTTCATACCCTGAGACCGGTTTTGAGGGACCACGCATG  550

seq1  ACGTGATTTAACTCACAGTGCTTAAAACCTTGGCTTTAACCTGAATCATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGATTTAACTCACAGTGCTTAAAACCTTGGCTTTAACCTGAATCATG  600

seq1  GGGAAGGCCGATGGATTCTAGATCCAAGCTTAGTCAGATCCAAGGGGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGCCGATGGATTCTAGATCCAAGCTTAGTCAGATCCAAGGGGCAG  650

seq1  AGGCAGACAAAACTGGAAGAATTGCTAATGTGTAGGGGTGGATAGTACCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACAAAACTGGAAGAATTGCTAATGTGTAGGGGTGGATAGTACCG  700

seq1  ACAGAACACAGAAGGCAGCAAACATCCTCTGAATCAATCGCCTGACATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACACAGAAGGCAGCAAACATCCTCTGAATCAATCGCCTGACATGC  750

seq1  CGTTTCATATTTCATATGCCCAGTGTTGGTGTGTCACGGAGGACACTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCATATTTCATATGCCCAGTGTTGGTGTGTCACGGAGGACACTGGA  800

seq1  TGCAGAAGATACTCTTCAGGAATTCTGCATCCTCCATTATAGGCACGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAGATACTCTTCAGGAATTCTGCATCCTCCATTATAGGCACGAAA  850

seq1  CCAGTAGCAGCTATTTTGTTGGAGATGGTATCCTAAACCCTTAAAGCTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGCAGCTATTTTGTTGGAGATGGTATCCTAAACCCTTAAAGCTTT  900

seq1  ATTTGGCTACTTTAGTCAACTCTACCACTCTCAGGCAAGCGTTATATCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTACTTTAGTCAACTCTACCACTCTCAGGCAAGCGTTATATCCC  950

seq1  CATACTCATGAAAAAGCTGAGA-CACAGAGAAA-TTAAGCAGCTTACCCA  998
      |||||||||| ||||||||||| |||||||||| ||||||||||||||||
seq2  CATACTCATG-AAAAGCTGAGACCACAGAGAAATTTAAGCAGCTTACCCA  999

seq1  GG-CCACTCAGTGAACAGTAGTTATAGGCTAGCTTGTTTCTATGACTTTT  1047
      || |||||||||||||||||| ||||||||||||||||||||||||  ||
seq2  GGCCCACTCAGTGAACAGTAG-TATAGGCTAGCTTGTTTCTATGAC-CTT  1047

seq1  GCCCTGCCCATCCTATCCATCCTTTGTAGA--GACTTAGCAAG-CACTTG  1094
      ||||||||||||||||||||||||||||||   |||||||||| ||||||
seq2  GCCCTGCCCATCCTATCCATCCTTTGTAGAAGAACTTAGCAAGCCACTTG  1097

seq1  A-GAGCC--TCAAGCTGTTAGCTG-CATTATATAG-ATGACCTCATACAA  1139
      | |||||   |||||||||||||| |||||||||| |||| |||||||||
seq2  AGGAGCCCTCCAAGCTGTTAGCTGCCATTATATAGAATGA-CTCATACAA  1146

seq1  TTTCC--ATAGCAGTGTTGGAATGGTGACATC-GTTATCTTCAGCTC-AT  1185
      || ||  ||||||  |||||||||| ||| || ||||||| |||||| ||
seq2  TTCCCATATAGCA--GTTGGAATGGCGACTTCGGTTATCTCCAGCTCTAT  1194

seq1  AGAAGAA--TAAATTC  1199
      || ||||  |||||||
seq2  AGCAGAAATTAAATTC  1210

seq1: chr13_68523746_68523938
seq2: B6Ng01-251M18.g_73_269

seq1  TTTGTTTAGCTTTGTTAATAGGGATATTTGATTCTCAGGAGTCTTGAGGA  50
      ||||||||||| | |||||||||  ||||||||||| |||||||||||||
seq2  TTTGTTTAGCTCTTTTAATAGGGTCATTTGATTCTCGGGAGTCTTGAGGA  50

seq1  GTACACTTGGCTCCAGCTGCATAGGTAGCAGCAGATGGCCTTGTCAGTCA  100
      ||||||||||||||||||||||| ||||||   |||| ||||||||| ||
seq2  GTACACTTGGCTCCAGCTGCATATGTAGCATAGGATGACCTTGTCAGGCA  100

seq1  TCAATGGAAGGAGAGGTCCTTGGTCCTATGAAGGCTAGATAGATGCCCCA  150
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCAATGGAAGGAGAGGTCCTTGGTCCTATGAAGGCTGGATAGATGCCCCA  150

seq1  GTATAGGGAAATCCAGGACGGTGAGGTTGGA----GTGGATGGGTGG  193
      ||||||||||||||| |  || |||||||||    |||| |||||||
seq2  GTATAGGGAAATCCAAGGTGGAGAGGTTGGAGTTGGTGGTTGGGTGG  197