BAC Information

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BAC

Clone NameB6Ng01-251O06
Chromosome13 (Build37)
Map Location 77,661,918 - 77,663,073
singlet/doubletsinglet
Overlap genenone
Upstream geneMctp1, LOC666603, EG666607, Ankrd32, 2210408I21Rik, LOC631139
Downstream geneLOC675063, D13Mgi7, 1110033M05Rik, 1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251O06.bB6Ng01-251O06.g
ACCGA059033GA059034
length1,1721,146
definitionB6Ng01-251O06.b B6Ng01-251O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactctcaacctacctattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atactaattggaaaggaagaagtcaaaatatcactttttgcaaatatatg
atagtatatatgtgaccctaaaaattccaccagagaactcctaagcctaa
tgaacagcttcaatgaagtagctggatataaaattaactcaaacaagtca
atggcctttctgtacacaaaggataaacaggctgagaaagaaattaggga
aacaacacccttctcaatagtcacaaataatataaaataccttggcgtga
ctctaactaaggaagtgaaagatctgtatgatcttcaagtctctaaagaa
cgaaattaaagaagatctcagaagatggaaagatctcccatgctcatgga
ttggcaggatcaacattgtaaaaatggctatcttgccaaaagcaatctac
agattcaatgcaatcctcatcaaaattccaactcaattcttcacagaatt
agaaagggcaatcagcagattcatctggaataacaaaaacctaggatagc
aaaaactcttctgaaggataaaagaacctctggtggaatcaccatgccgg
acctaaagctgtactacagatcaattgtgataaaaactgcatggtactgg
tatagtgacagacaagtagaccaatggaatagaattgacgacccagagat
caacccacacacctatggtcacttgatcttcgacaagggagctaaaacca
tccagtggaaaaacgacagcattttcaacaaatggtgctggcacaactgg
gttgttatcatgtagaagatgagaatttgatccattcatatctccttgta
ctaagtcaatcgaagtggatagactcacataaaaccagagacactgaaac
ttatagagagaagtagggaaaagtctcaagaattggcacagggggaaatt
cctgatgaacagcatgcttggcttagatcggatcgaataatgacctcata
attgcaagacttcctgccaaag
gaattcctggagctaacagaaattgtaaaccaaatgaacctatcagatat
ttacagaacatttcacccaaacacaaaagtatttaccttcttttctgcac
atcatgaaactttctgaaatttgactacatactaggatacaaaaccagtc
tcaacagatacaaaaaaaattggaacaacctcctgtgtcctactaaacca
ccacaggtttcttccttatttctctaaagctccccttcctacctcatggc
tgcttgttgtcattgtggctgacctccatgcccaactcagatagtgtggt
tctctgtctccctcttagtcttccacttacaaatctataataagctcact
aatgagaggtttgtgctattcctgctttggtatgcatgtgtgtgtgtaca
tgtacaagtgtgcacatctgtgtagttgaatagttcatagaatttcttta
aaacaatgttcatcccaagagtgttgttatagtctcactaccaatatatt
ggatcttcatagtacatatgtttaaccctctaaaagaattcatatatagc
atatgtgtatatatgtatatgtgtgtaccacaattctttatcttggtgta
ataatagtattctatttctgtatgaatttcaagataatagtatttagttc
aatattacagttttaaaatgcatgccactgacaatgcatattttttaatg
gtaaggccttttattcttaccagcttctttccttatgttgtgttatttac
accaaatataaaataatataaaaacaatgtacagttacctgaagctgcat
cttcactcatcaaataaaatagagaattaaaatatatgattaagtgtaaa
atattttggacagaggttgagatactttaaagatactttaattctgcaat
gtttgaataattgtttcatactcccctcctttgtgtatacatagtaagag
aggaaaaaacttgtgaaatgttcatgttttcctcttgtgtcaacatagat
atgtcatatattttttgtttatgggctcattttcagttaatgcagatttt
aagtgaagataatcacatatttacgagttaatgtgttaatggagagaatg
aatttgagtatttaattaccatagattcatgacttggcaactgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_77661918_77663073
seq2: B6Ng01-251O06.g_67_1212

seq1  GAATTCCTGGAGCTAACAGAAATTGTAAACCAAATGAACCTATCAGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGAGCTAACAGAAATTGTAAACCAAATGAACCTATCAGATAT  50

seq1  TTACAGAACATTTCACCCAAACACAAAAGTATTTACCTTCTTTTCTGCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAACATTTCACCCAAACACAAAAGTATTTACCTTCTTTTCTGCAC  100

seq1  ATCATGAAACTTTCTGAAATTTGACTACATACTAGGATACAAAACCAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAAACTTTCTGAAATTTGACTACATACTAGGATACAAAACCAGTC  150

seq1  TCAACAGATACAAAAAAAATTGGAACAACCTCCTGTGTCCTACTAAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACAGATACAAAAAAAATTGGAACAACCTCCTGTGTCCTACTAAACCA  200

seq1  CCACAGGTTTCTTCCTTATTTCTCTAAAGCTCCCCTTCCTACCTCATGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGTTTCTTCCTTATTTCTCTAAAGCTCCCCTTCCTACCTCATGGC  250

seq1  TGCTTGTTGTCATTGTGGCTGACCTCCATGCCCAACTCAGATAGTGTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTTGTCATTGTGGCTGACCTCCATGCCCAACTCAGATAGTGTGGT  300

seq1  TCTCTGTCTCCCTCTTAGTCTTCCACTTACAAATCTATAATAAGCTCACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCTCCCTCTTAGTCTTCCACTTACAAATCTATAATAAGCTCACT  350

seq1  AATGAGAGGTTTGTGCTATTCCTGCTTTGGTATGCATGTGTGTGTGTACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAGGTTTGTGCTATTCCTGCTTTGGTATGCATGTGTGTGTGTACA  400

seq1  TGTACAAGTGTGCACATCTGTGTAGTTGAATAGTTCATAGAATTTCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAAGTGTGCACATCTGTGTAGTTGAATAGTTCATAGAATTTCTTTA  450

seq1  AAACAATGTTCATCCCAAGAGTGTTGTTATAGTCTCACTACCAATATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATGTTCATCCCAAGAGTGTTGTTATAGTCTCACTACCAATATATT  500

seq1  GGATCTTCATAGTACATATGTTTAACCCTCTAAAAGAATTCATATATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTCATAGTACATATGTTTAACCCTCTAAAAGAATTCATATATAGC  550

seq1  ATATGTGTATATATGTATATGTGTGTACCACAATTCTTTATCTTGGTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTGTATATATGTATATGTGTGTACCACAATTCTTTATCTTGGTGTA  600

seq1  ATAATAGTATTCTATTTCTGTATGAATTTCAAGATAATAGTATTTAGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAGTATTCTATTTCTGTATGAATTTCAAGATAATAGTATTTAGTTC  650

seq1  AATATTACAGTTTTAAAATGCATGCCACTGACAATGCATATTTTTTAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTACAGTTTTAAAATGCATGCCACTGACAATGCATATTTTTTAATG  700

seq1  GTAAGGCCTTTTATTCTTACCAGCTTCTTTCCTTATGTTGTGTTATTTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCCTTTTATTCTTACCAGCTTCTTTCCTTATGTTGTGTTATTTAC  750

seq1  ACCAAATATAAAATAATATAAAAACAATGTACAGTTACCTGAAGCTGCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATATAAAATAATATAAAAACAATGTACAGTTACCTGAAGCTGCAT  800

seq1  CTTCACTCATCAAATAAAATAGAGAATTAAAATATATGATTAAGTGTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCATCAAATAAAATAGAGAATTAAAATATATGATTAAGTGTAAA  850

seq1  ATATTTTGGACAGAGGTTGAGATACTTTAAAGATACTTTAATTCTGCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTGGACAGAGGTTGAGATACTTTAAAGATACTTTAATTCTGCAAT  900

seq1  GTTTGAATAATTGTTTCATACTCCCCTCCTTTGTGTATACATAGTAAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAATAATTGTTTCATACTCCCCTCCTTTGTGTATACATAGTAAGAG  950

seq1  AGGAAAAAAACTTGTGAAATGTTCATGTTTTCCTCTTGTGTCAACATAGA  1000
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGG-AAAAAACTTGTGAAATGTTCATGTTTTCCTCTTGTGTCAACATAGA  999

seq1  TATGTCATAATATTTTTTGTTTTATGGGGCTCATTTCCAGTTAATGCAGA  1050
      |||||||| |||||||||| ||||| |||||||||| |||||||||||||
seq2  TATGTCAT-ATATTTTTTG-TTTAT-GGGCTCATTTTCAGTTAATGCAGA  1046

seq1  ATTTTAAAGTGAAGATAATCACAATAATTAAGGAGTAAATGTGTAAAT-G  1099
        ||| |||||||||||||||||   ||| | |||| ||||||| ||| |
seq2  --TTTTAAGTGAAGATAATCACA--TATTTACGAGTTAATGTGTTAATGG  1092

seq1  AGAG-ATG-ATTTGAGTTATTTAATTAACATAGATTCATGGAAATTTGGC  1147
      |||| ||| ||||||| |||||||||| ||||||||||||   | |||||
seq2  AGAGAATGAATTTGAG-TATTTAATTACCATAGATTCATG---ACTTGGC  1138

seq1  AACTAGAGA  1156
      |||| ||||
seq2  AACT-GAGA  1146