BAC Information

Click to search

BAC

Clone NameB6Ng01-251P13
Chromosome13 (Build37)
Map Location 86,022,315 - 86,023,373
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373
Downstream geneLOC675662, Cox7c, LOC100042887, LOC100042893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251P13.bB6Ng01-251P13.g
ACCGA059095GA059096
length1,1491,058
definitionB6Ng01-251P13.b B6Ng01-251P13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaagaatacagaatggctgagaagcacctgaaaaaata
tttaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtgatgaaagaggaaggctcctacattgctggtg
ggattgcaagattgtacaaccactggaaatcagtctggatgttcctcaga
aaaatggacataatactaccagaagatcctgcaatacctctcctgggtat
atacccagatgttccaaatggtaataagggcacatgctccaccatgttca
tagcagccttatttatattagccagaagctggaaagaacccagatgttcc
tcaacagaggaatggatactgaaattgtggtacatttacacaatggagta
ctactcagctattaaaaaatgaatttatgaaattcttaggcaaatggctg
gatctggagggtatcatcctgagtgaggtaacccaatcacaaaagaactc
acatgatatgcactcactgataagtggatactagcccagaatcttagaat
acccaaaatacaatttgcaaaacacataaaactcaaggagaaggaagact
gaagtgtggataattcattcctccttagactagggaacaaaatacccatt
gaaggagttacagagacaaagtttggagctgagacagaagggtggaccat
ccagagactgccccacccggggtccatcccataatcagccaccaaatgga
gacactattgcatatgccagcacaattttgctgacaggaccctgatatag
ttctctcttgtcaggctataccagtgcctggcaaatacagaagtggaagc
tcacagtcatatattggatagaacacagggcccccaatcaagaagctaga
gaaagtacccaaagaactgaaagggtctgtatcctataggaggaacaaca
gtatgactaagcagtatcccagagctcatgtctctagctgcatatgtagc
agagatgactattggcatcattgggaagagagctctgtgtgcaaacttta
ttacgctctcagcttgggtcagaaagagtagttggttgtttgggggata
gaattcatttgcataatcagtgtactgtccttgctgaggtatatttagaa
gggccaagtttgcaagaatgtgatcaagatgggtttgagaaaacagcaat
ttcttcctttttagactctgagagatgcacttttgggcagtgtaggatta
atgtaatatgttagaagggggaaattaatttatagaacatattacttcaa
aagcagtcttacttgggtaatacaaattcattaaaatgtatttggaaata
tttacgagtgtcaaggctactcatgagctctaaagtcaatctgcatcatt
ttgaaccacttagtagaaatatgtatcttctgattttagggtaacaaatg
attagccacatttcttgcctgcatcacctaaaacttcttggtacctattt
catcatctgtggaatgcaaacgttaaattcatagttcgtgaacttagggc
ccctagatattttatagatccatctgggtattttaaagatatgtgaatat
ggaagctattctttctatttgctagtgttgcatgtaccttgtgctagcat
acagaagaacagtctccttgtccctctcagaaatgcttaacagtgtgtta
tttctcagcctttgctttcaacactcttgcttcttcaattgacaatgtca
gtttaatgactggagaaaaggattgactcgattaagaatgagtaaacagg
ttgcatagtgaagcatggctgagtgtcattagctgcagcaaaagaactga
aaagccttaggactagagcgaccagtaaaaatcaccacaagtgtcaagca
ttaacattgtagttttatagtctctgtgagaattgggacattaacagttg
cctaatgaatacatttctcaccataatatatgaccatccttttctctatt
cacaagcttttctatattcaatgtaacatgttttttcaaggacagaatgc
caacttttctgctataaaacaaagaacaaaaggacaaaagtagctaggga
gcagagaacatctcttacattaggtgtagtgttggcaaagtatagacaca
gttgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86022315_86023373
seq2: B6Ng01-251P13.g_65_1122 (reverse)

seq1  CAGGCAACTGTTGTCTATACTTTGCAAACACTTACACCTAATGGTAGAGA  50
      |||||||||| |||||||||||||| ||||| |||||||||||  |||||
seq2  CAGGCAACTG-TGTCTATACTTTGCCAACAC-TACACCTAATGTAAGAGA  48

seq1  TGTCTCT-TGCTCCCTAGCTACTTTTGTCCTTTTGTTCTTTGTTTTATAG  99
      ||| ||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGT-TCTCTGCTCCCTAGCTACTTTTGTCCTTTTGTTCTTTGTTTTATAG  97

seq1  CAG-AAAGTTGGCATTCTGTCCTTGAAAAAACATGTTACATTGAATATAG  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGTTGGCATTCTGTCCTTGAAAAAACATGTTACATTGAATATAG  147

seq1  AAAAGCTTGTGAATAGAGAAAAGGATGGTCATATATTATGGTGAGAAATG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTTGTGAATAGAGAAAAGGATGGTCATATATTATGGTGAGAAATG  197

seq1  TATTCATTAGGCAACTGTTAATGTCCCAATTCTCACAGAGACTATAAAAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCATTAGGCAACTGTTAATGTCCCAATTCTCACAGAGACTATAAAAC  247

seq1  TACAATGTTAATGCTTGACACTTGTGGTGATTTTTACTGGTCGCTCTAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGTTAATGCTTGACACTTGTGGTGATTTTTACTGGTCGCTCTAGT  297

seq1  CCTAAGGCTTTTCAGTTCTTTTGCTGCAGCTAATGACACTCAGCCATGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGGCTTTTCAGTTCTTTTGCTGCAGCTAATGACACTCAGCCATGCT  347

seq1  TCACTATGCAACCTGTTTACTCATTCTTAATCGAGTCAATCCTTTTCTCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGCAACCTGTTTACTCATTCTTAATCGAGTCAATCCTTTTCTCC  397

seq1  AGTCATTAAACTGACATTGTCAATTGAAGAAGCAAGAGTGTTGAAAGCAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTAAACTGACATTGTCAATTGAAGAAGCAAGAGTGTTGAAAGCAA  447

seq1  AGGCTGAGAAATAACACACTGTTAAGCATTTCTGAGAGGGACAAGGAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGAAATAACACACTGTTAAGCATTTCTGAGAGGGACAAGGAGAC  497

seq1  TGTTCTTCTGTATGCTAGCACAAGGTACATGCAACACTAGCAAATAGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCTGTATGCTAGCACAAGGTACATGCAACACTAGCAAATAGAAA  547

seq1  GAATAGCTTCCATATTCACATATCTTTAAAATACCCAGATGGATCTATAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCTTCCATATTCACATATCTTTAAAATACCCAGATGGATCTATAA  597

seq1  AATATCTAGGGGCCCTAAGTTCACGAACTATGAATTTAACGTTTGCATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAGGGGCCCTAAGTTCACGAACTATGAATTTAACGTTTGCATTC  647

seq1  CACAGATGATGAAATAGGTACCAAGAAGTTTTAGGTGATGCAGGCAAGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGATGAAATAGGTACCAAGAAGTTTTAGGTGATGCAGGCAAGAA  697

seq1  ATGTGGCTAATCATTTGTTACCCTAAAATCAGAAGATACATATTTCTACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTAATCATTTGTTACCCTAAAATCAGAAGATACATATTTCTACT  747

seq1  AAGTGGTTCAAAATGATGCAGATTGACTTTAGAGCTCATGAGTAGCCTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTTCAAAATGATGCAGATTGACTTTAGAGCTCATGAGTAGCCTTG  797

seq1  ACACTCGTAAATATTTCCAAATACATTTTAATGAATTTGTATTACCCAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCGTAAATATTTCCAAATACATTTTAATGAATTTGTATTACCCAAG  847

seq1  TAAGACTGCTTTTGAAGTAATATGTTCTATAAATTAATTTCCCCCTTCTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACTGCTTTTGAAGTAATATGTTCTATAAATTAATTTCCCCCTTCTA  897

seq1  ACATATTACATTAATCCTACACTGCCCAAAAGTGCATCTCTCAGAGTCTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTACATTAATCCTACACTGCCCAAAAGTGCATCTCTCAGAGTCTA  947

seq1  AAAAGGAAGAAATTGCTGTTTTCTCAAACCCATCTTGATCACATTCTTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAGAAATTGCTGTTTTCTCAAACCCATCTTGATCACATTCTTGC  997

seq1  AAACTTGGCCCTTCTAAATATACCTCAGCAAGGACAGTACACTGATTATG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTGGCCCTTCTAAATATACCTCAGCAAGGACAGTACACTGATTATG  1047

seq1  CAAATGAATTC  1059
      |||||||||||
seq2  CAAATGAATTC  1058