BAC Information

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BAC

Clone NameB6Ng01-253I24
Chromosome13 (Build37)
Map Location 67,927,252 - 68,052,084
singlet/doubletdoublet
Overlap geneZfp273, BC048507, LOC666185
Upstream geneEG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597
Downstream geneLOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253I24.bB6Ng01-253I24.g
ACCGA060260GA060261
length1,1361,046
definitionB6Ng01-253I24.b B6Ng01-253I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,050,940 - 68,052,084)(67,927,252 - 67,928,305)
sequence
gaattctttgtctttataggttaaagtgctccgttctcttctgctgtgat
gggcctccggtcactgcaaagaagacattagagatggtaggatggaatta
cccaactatgcaaatgacttaaacatcggattccaattttgtaggtgttt
aaaattagaatttaaaaaaaatggtaatgttcttgggtatatcaaagata
gccaagaatcagatttaatagtgttgaggggtaaccacgcttggcagaag
cagaaagctatagaaaaagaaagagagatcctggggtacaagttagtgtc
ttctgtgacaggacaacagcctcttactatacagatgtgtccgtgtcttt
attattgaacctcaattgggtcccctgaaagccctgtaatatttggggag
gcctgactttccaacagcttcaaatcttgctatttgtgctctctcttcta
tttctttgatactatagtaagagcattaatgcataccaactgtccacaag
aaataatcaagaaactctttgcacaacccaggccggctttcagactcctt
ggttcaggagttaagtaagacattctgggagaaattgccttgaacataaa
agtgtgggccggaggaccccaggtcacaaggttcatcactgggaaaatga
aacactgaaagttttggcttctcactcaatttacattaccaccattttcc
aaagtacactgattcactcacaaaggccaggtggccaagaacacaaaaat
atctctgtccttcatgggctcatcatcatagtcccaacgtctcacctcag
aatgtggtaagtggaactgcggaatgacttgctaactcacttagaattta
aaaataaaccctgagcgaagaaatgtggacaatttcttccaggctgagca
cagctattattcttgagtgtgggataaccacacatgcagtaccgtatgtc
cctgtatctcaattgttaattgccatgtgactgtgccaggctagcaggat
atgcaaatgaaatgaggtcctttctcacctgccccccaaaaaaagacaag
ccaccctggggaagtcatgtagcccccactgctagtggaatgagtgagag
catcattttgtataataagacctgctgcctagagct
gaattcatatgagaggggaactttagaaatgaaaggaacaagggaagacc
tttaataatagctcaactcttattcaccctcttccattaaacggaggaga
aatcttgtaatgtgaagaagatggctgtaatgaacaatctatacttatga
aacatcaaaattttcattttacagaaaccctgcaaatgcaagtaatgggg
gaaatgcacactcaccacgagtgaattataatcaaactgtatacatgcat
aatgactcgggaaggaacactgtcaagtacataaaactgagacaaccgaa
ctcttacagtaagaagcactgtgtacactgtgttgcaagagcacatggat
cttaagagatataagagacaaatcccaggagttgtatagaattttagcaa
agcaacaaatactgcttataaccggcaggaaaatgtttggcctgatataa
gaactcattacacactttggatcatgcagataagtctgtgaggacatcag
tatgttatcaatccaaattataagctcagtttttacaagtgaaaagatca
caaggactagtgattttatcagaagaacaagactgagtcctgaggtttcc
gagtccttttttttccccaaagtccatagatacatcattggaatatgaag
tttattaatttttgtaaataaaaacaagctgttattaatgtgtgattagt
attgcattcttttttttttactgtttttttctaagttttatataggtttt
tttttcattaagatagaaaaactaccttagtgaggtgtaaaggctaatat
tggctgtccacctgagacctaggaagaaggatcctcagctgaagaatggt
ctgtatcagtgtgtcctgtgagtgtgactgttacagcctcttgagtgcaa
ttgatgtagaaagggtccagtcactgtgggcgataccgtccctaggctgt
ggacctgggctctatagaaagtacctgaaaatgagactaggatgagcagc
aatagcattcttcatctctttgctcagttcctgcctaaatacttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68050940_68052084
seq2: B6Ng01-253I24.b_47_1182 (reverse)

seq1  AGCTCTAGCCACCAGGTCTTTATTATACAAAAATCCATGCTCTTCACTCA  50
      |||||||| || |||||| |||||||||||||    |||||| |||||||
seq2  AGCTCTAGGCAGCAGGTC-TTATTATACAAAA--TGATGCTC-TCACTCA  46

seq1  -TCCACTAGGCAGTGGGGGCTTACATGACCTTCCCCAGGGTGGCTTGTCT  99
       ||||||| ||||||||||| ||||||| |||||||||||||||||||||
seq2  TTCCACTA-GCAGTGGGGGC-TACATGA-CTTCCCCAGGGTGGCTTGTCT  93

seq1  TTTTTTGGGGGGCAGGTGAGGAAAGGACCTCATTTCATTTGCATATCCTG  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTTTTGGGGGGCAGGTGA-GAAAGGACCTCATTTCATTTGCATATCCTG  142

seq1  CTAGCCTGGCACAGTCAACATGGCAATTAACAATTGAGAATACAGGGACA  199
      |||||||||||||||| ||||||||||||||||||||| |||||||||||
seq2  CTAGCCTGGCACAGTC-ACATGGCAATTAACAATTGAG-ATACAGGGACA  190

seq1  TACGGTACTGCATGTGTGGTTATCCCACACTCAAGAATAATAGCTGTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGTACTGCATGTGTGGTTATCCCACACTCAAGAATAATAGCTGTGCT  240

seq1  CAGCCTGGAAGAAATTGTCCACATTTCTTCGCTCAGGGTTTATTTTTAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGAAGAAATTGTCCACATTTCTTCGCTCAGGGTTTATTTTTAAA  290

seq1  TTCTAAGTGAGTTAGCAAGTCATTCCGCAGTTCCACTTACCACATTCTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGTGAGTTAGCAAGTCATTCCGCAGTTCCACTTACCACATTCTGA  340

seq1  GGTGAGACGTTGGGACTATGATGATGAGCCCATGAAGGACAGAGATATTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGACGTTGGGACTATGATGATGAGCCCATGAAGGACAGAGATATTT  390

seq1  TTGTGTTCTTGGCCACCTGGCCTTTGTGAGTGAATCAGTGTACTTTGGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTCTTGGCCACCTGGCCTTTGTGAGTGAATCAGTGTACTTTGGAA  440

seq1  AATGGTGGTAATGTAAATTGAGTGAGAAGCCAAAACTTTCAGTGTTTCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGGTAATGTAAATTGAGTGAGAAGCCAAAACTTTCAGTGTTTCAT  490

seq1  TTTCCCAGTGATGAACCTTGTGACCTGGGGTCCTCCGGCCCACACTTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCAGTGATGAACCTTGTGACCTGGGGTCCTCCGGCCCACACTTTTA  540

seq1  TGTTCAAGGCAATTTCTCCCAGAATGTCTTACTTAACTCCTGAACCAAGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAGGCAATTTCTCCCAGAATGTCTTACTTAACTCCTGAACCAAGG  590

seq1  AGTCTGAAAGCCGGCCTGGGTTGTGCAAAGAGTTTCTTGATTATTTCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAAAGCCGGCCTGGGTTGTGCAAAGAGTTTCTTGATTATTTCTTG  640

seq1  TGGACAGTTGGTATGCATTAATGCTCTTACTATAGTATCAAAGAAATAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGTTGGTATGCATTAATGCTCTTACTATAGTATCAAAGAAATAGA  690

seq1  AGAGAGAGCACAAATAGCAAGATTTGAAGCTGTTGGAAAGTCAGGCCTCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGCACAAATAGCAAGATTTGAAGCTGTTGGAAAGTCAGGCCTCC  740

seq1  CCAAATATTACAGGGCTTTCAGGGGACCCAATTGAGGTTCAATAATAAAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATTACAGGGCTTTCAGGGGACCCAATTGAGGTTCAATAATAAAG  790

seq1  ACACGGACACATCTGTATAGTAAGAGGCTGTTGTCCTGTCACAGAAGACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGACACATCTGTATAGTAAGAGGCTGTTGTCCTGTCACAGAAGACA  840

seq1  CTAACTTGTACCCCAGGATCTCTCTTTCTTTTTCTATAGCTTTCTGCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGTACCCCAGGATCTCTCTTTCTTTTTCTATAGCTTTCTGCTTC  890

seq1  TGCCAAGCGTGGTTACCCCTCAACACTATTAAATCTGATTCTTGGCTATC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAGCGTGGTTACCCCTCAACACTATTAAATCTGATTCTTGGCTATC  940

seq1  TTTGATATACCCAAGAACATTACCATTTTTTTTAAATTCTAATTTTAAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATATACCCAAGAACATTACCATTTTTTTTAAATTCTAATTTTAAAC  990

seq1  ACCTACAAAATTGGAATCCGATGTTTAAGTCATTTGCATAGTTGGGTAAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAAAATTGGAATCCGATGTTTAAGTCATTTGCATAGTTGGGTAAT  1040

seq1  TCCATCCTACCATCTCTAATGTCTTCTTTGCAGTGACCGGAGGCCCATCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATCCTACCATCTCTAATGTCTTCTTTGCAGTGACCGGAGGCCCATCA  1090

seq1  CAGCAGAAGAGAACGGAGCACTTTAACCTATAAAGACAAAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAAGAGAACGGAGCACTTTAACCTATAAAGACAAAGAATTC  1136

seq1: chr13_67927252_67928305
seq2: B6Ng01-253I24.g_64_1109

seq1  GAATTCATATGAGAGGGGAACTTTAGAAATGAAAGGAACAAGGGAAGACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGAGAGGGGAACTTTAGAAATGAAAGGAACAAGGGAAGACC  50

seq1  TTTAATAATAGCTCAACTCTTATTCACCCTCTTCCATTAAACGGAGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAATAGCTCAACTCTTATTCACCCTCTTCCATTAAACGGAGGAGA  100

seq1  AATCTTGTAATGTGAAGAAGATGGCTGTAATGAACAATCTATACTTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTAATGTGAAGAAGATGGCTGTAATGAACAATCTATACTTATGA  150

seq1  AACATCAAAATTTTCATTTTACAGAAACCCTGCAAATGCAAGTAATGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCAAAATTTTCATTTTACAGAAACCCTGCAAATGCAAGTAATGGGG  200

seq1  GAAATGCACACTCACCACGAGTGAATTATAATCAAACTGTATACATGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGCACACTCACCACGAGTGAATTATAATCAAACTGTATACATGCAT  250

seq1  AATGACTCGGGAAGGAACACTGTCAAGTACATAAAACTGAGACAACCGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCGGGAAGGAACACTGTCAAGTACATAAAACTGAGACAACCGAA  300

seq1  CTCTTACAGTAAGAAGCACTGTGTACACTGTGTTGCAAGAGCACATGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACAGTAAGAAGCACTGTGTACACTGTGTTGCAAGAGCACATGGAT  350

seq1  CTTAAGAGATATAAGAGACAAATCCCAGGAGTTGTATAGAATTTTAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAGATATAAGAGACAAATCCCAGGAGTTGTATAGAATTTTAGCAA  400

seq1  AGCAACAAATACTGCTTATAACCGGCAGGAAAATGTTTGGCCTGATATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAATACTGCTTATAACCGGCAGGAAAATGTTTGGCCTGATATAA  450

seq1  GAACTCATTACACACTTTGGATCATGCAGATAAGTCTGTGAGGACATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCATTACACACTTTGGATCATGCAGATAAGTCTGTGAGGACATCAG  500

seq1  TATGTTATCAATCCAAATTATAAGCTCAGTTTTTACAAGTGAAAAGATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTATCAATCCAAATTATAAGCTCAGTTTTTACAAGTGAAAAGATCA  550

seq1  CAAGGACTAGTGATTTTATCAGAAGAACAAGACTGAGTCCTGAGGTTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACTAGTGATTTTATCAGAAGAACAAGACTGAGTCCTGAGGTTTCC  600

seq1  GAGTCCTTTTTTTTCCCCAAAGTCCATAGATACATCATTGGAATATGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTTTTTTTTCCCCAAAGTCCATAGATACATCATTGGAATATGAAG  650

seq1  TTTATTAATTTTTGTAAATAAAAACAAGCTGTTATTAATGTGTGATTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAATTTTTGTAAATAAAAACAAGCTGTTATTAATGTGTGATTAGT  700

seq1  ATTGCATTCTTTTTTTTTTACTGTTTTTTTCTAAGTTTTATATAGG-TTT  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATTGCATTCTTTTTTTTTTACTGTTTTTTTCTAAGTTTTATATAGGTTTT  750

seq1  TTTTTCATTAAGATAGAAAAACTACCTTAGTGAGGTGTAAAGGCTAATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATTAAGATAGAAAAACTACCTTAGTGAGGTGTAAAGGCTAATAT  800

seq1  TGGCTGTCCACCTGAGACCTAGGAAGAAGGATCCTCAGCTGAAGAATGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCACCTGAGACCTAGGAAGAAGGATCCTCAGCTGAAGAATGGT  850

seq1  CTGTATCAGTGTGTCCTGTGAGTGTGACTGTTACAGCCTCTTGAGTGCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCAGTGTGTCCTGTGAGTGTGACTGTTACAGCCTCTTGAGTGCAA  900

seq1  TTGATGTAG-AAGGGTCCAGTCCACTGTGGGCGATACCGTCCCTAGGCTG  948
      ||||||||| ||||||||||| ||||||||||||||||||||||||||||
seq2  TTGATGTAGAAAGGGTCCAGT-CACTGTGGGCGATACCGTCCCTAGGCTG  949

seq1  TGGACCTGGGCTCTATAAGAAAGGTACCTGAAAATGAGACTAGGAATGAG  998
      |||||||||||||||| ||||| ||||||||||||||||||||| |||||
seq2  TGGACCTGGGCTCTAT-AGAAA-GTACCTGAAAATGAGACTAGG-ATGAG  996

seq1  CCAGCAAATAGCATTCCTCCATTCTCTTTGCTCAGGTTTCTGCCTTAAAT  1048
       |||| |||||||||| ||   |||||||||||| ||| ||||| |||||
seq2  -CAGC-AATAGCATTCTTC--ATCTCTTTGCTCA-GTTCCTGCC-TAAAT  1040

seq1  ACTTGC  1054
      ||||||
seq2  ACTTGC  1046