BAC Information

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BAC

Clone NameB6Ng01-255A14
Chromosome13 (Build37)
Map Location 84,593,027 - 84,731,969
singlet/doubletdoublet
Overlap genenone
Upstream geneMef2c, LOC100043111, LOC623241, LOC432789, 2810049E08Rik, LOC100043119, LOC667081, LOC667101, Tmem161b, LOC666795, LOC667111
Downstream geneLOC382786, LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255A14.bB6Ng01-255A14.g
ACCGA061345GA061346
length1,108637
definitionB6Ng01-255A14.b B6Ng01-255A14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,730,833 - 84,731,969)(84,593,027 - 84,593,663)
sequence
gaattcccagtaatatatttgggtactgttggcagagcaaaaattgactt
catggaaggaaaatgcagagatgtctttgtttctctgtatcttactgttc
tatcatctccctaccttttcatttatatcttcttccttcacatttctgca
gctctagtgtagatacatacaaagccataaccacaagcatattccagtat
aaagcttacaatgttttttttttcaactagagaatccttatctagataaa
tctggtactttacctctttttaaatatataatcttcctctttttgctttg
cattgtagaaatctaattatataggaatcttagtctgaggtgtccctctg
agaaatcctgtctattgctttctgtatgccatatatattttttcaaccac
tttcctgtcttaactaacagtaacaatgatggaacaattaccaggtcaga
ttttcataaacatgtatttcgcttcttgttttttaacatatactttttgg
gctaccttgaataaatctattaacctttctgagactcttttctttcattt
ctgagatgtaaaactgtgtgttcctccctacctggttactgagataacat
gaaaaactgtgcatgaaattattttaaaaatgaaaaccattataataatt
aataaatttcatttccaattagcaagtgaatcatttctgttatatgaatt
taatgtgtttagtgttcacagaatagttattataaaacagtaagtagata
tgatttgagaaatacttgctatgattctgtacatgcaaacatattcacta
tatggtgacttctaaattcctccatctatatgtaatttcttaattttaag
actttttacctccacagaaagtaccaacaatataataagcaactatgcta
gtaaatttataatatttattaattgcttggtcagcaaaagaaggtttcct
gattaaatttgaaaggaaaagacacagaactatctattaaggtattagct
aaacgtgcctgacagtatgaaaatgaacatatacagaaaaatacttttgg
ttttgtatttatttatatatttatactccatatcattctgctcccctatc
cacctcca

gaattctctctagtgaaggtcatctgcaaaaggatctggatgagtgctgg
gggtgatgtaaagaaaactgggattcacaggcaggtgctatcaagtgcaa
ctcctgtcacctcaagaatatcggctaggtaagcctgacagtgtaggacg
cagacccagcccttctgtggacatcagttttaatggggagaacatgacag
cagtgtttggggaactggaaaaataagaattttcagatcaggtgtcaaga
attctaaacatcaatactgtttaaggagtgatgggaaatgccacttgctt
tcaactggagacccagagctccttttccttggcaacttagattgaaatgc
tgtctcttctgaaaggaaaggtggaacctagttcttgcttgtttactggc
aaccctgctaaaataaacctcacatggatcctggataaaataaacaaaat
aagctataaatgattttaaggattatttgagatatttgactatgggctca
tacaagctgacgttattgaattttaaattcttggatgtaataattgtata
ttgcatgtctatagtgttaaaatatttagggataatgtgtcaccttacaa
tcaactgattttcaagagggttgagaaaaatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84730833_84731969
seq2: B6Ng01-255A14.b_45_1152 (reverse)

seq1  TGGAGGGTGGATTAGGGGAGCAGGGAATGGAATATGGAGTATAAAAATTA  50
      |||| |||||| ||||||||||  |||||  |||||||||||||| |   
seq2  TGGA-GGTGGA-TAGGGGAGCA--GAATG--ATATGGAGTATAAATA---  41

seq1  ATTAATTAAAAATTAAAATACAAAAACCAAAAAAGTATTTTTTCTTGGTA  100
            || ||||  |||||||||| |   ||||||| |||||||  || 
seq2  ------TATAAAT--AAATACAAAACC---AAAAGTA-TTTTTCT--GT-  76

seq1  ATATGTTCATTTTTCAATTACTTGTCAGGCACGTTTAAGCTAATACCTTA  150
      ||||||||| ||||||  ||| |||||||||||||| |||||||||||||
seq2  ATATGTTCA-TTTTCA--TAC-TGTCAGGCACGTTT-AGCTAATACCTTA  121

seq1  ATAGATAGTTCTGTGTCTTTTCCTTTCAAATTTAATCAGGAAACCTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGTTCTGTGTCTTTTCCTTTCAAATTTAATCAGGAAACCTTCTT  171

seq1  TTGCTGACCAAGCAATTAATAAATATTATAAATTTACTAGCATAGTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGACCAAGCAATTAATAAATATTATAAATTTACTAGCATAGTTGCT  221

seq1  TATTATATTGTTGGTACTTTCTGTGGAGGTAAAAAGTCTTAAAATTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATTGTTGGTACTTTCTGTGGAGGTAAAAAGTCTTAAAATTAAGA  271

seq1  AATTACATATAGATGGAGGAATTTAGAAGTCACCATATAGTGAATATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATATAGATGGAGGAATTTAGAAGTCACCATATAGTGAATATGTT  321

seq1  TGCATGTACAGAATCATAGCAAGTATTTCTCAAATCATATCTACTTACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTACAGAATCATAGCAAGTATTTCTCAAATCATATCTACTTACTG  371

seq1  TTTTATAATAACTATTCTGTGAACACTAAACACATTAAATTCATATAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAATAACTATTCTGTGAACACTAAACACATTAAATTCATATAACA  421

seq1  GAAATGATTCACTTGCTAATTGGAAATGAAATTTATTAATTATTATAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATTCACTTGCTAATTGGAAATGAAATTTATTAATTATTATAATG  471

seq1  GTTTTCATTTTTAAAATAATTTCATGCACAGTTTTTCATGTTATCTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTTTTAAAATAATTTCATGCACAGTTTTTCATGTTATCTCAGT  521

seq1  AACCAGGTAGGGAGGAACACACAGTTTTACATCTCAGAAATGAAAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGTAGGGAGGAACACACAGTTTTACATCTCAGAAATGAAAGAAAA  571

seq1  GAGTCTCAGAAAGGTTAATAGATTTATTCAAGGTAGCCCAAAAAGTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCAGAAAGGTTAATAGATTTATTCAAGGTAGCCCAAAAAGTATAT  621

seq1  GTTAAAAAACAAGAAGCGAAATACATGTTTATGAAAATCTGACCTGGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAAAACAAGAAGCGAAATACATGTTTATGAAAATCTGACCTGGTAA  671

seq1  TTGTTCCATCATTGTTACTGTTAGTTAAGACAGGAAAGTGGTTGAAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCATCATTGTTACTGTTAGTTAAGACAGGAAAGTGGTTGAAAAAA  721

seq1  TATATATGGCATACAGAAAGCAATAGACAGGATTTCTCAGAGGGACACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGGCATACAGAAAGCAATAGACAGGATTTCTCAGAGGGACACCT  771

seq1  CAGACTAAGATTCCTATATAATTAGATTTCTACAATGCAAAGCAAAAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAAGATTCCTATATAATTAGATTTCTACAATGCAAAGCAAAAAGA  821

seq1  GGAAGATTATATATTTAAAAAGAGGTAAAGTACCAGATTTATCTAGATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTATATATTTAAAAAGAGGTAAAGTACCAGATTTATCTAGATAA  871

seq1  GGATTCTCTAGTTGAAAAAAAAAACATTGTAAGCTTTATACTGGAATATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTCTAGTTGAAAAAAAAAACATTGTAAGCTTTATACTGGAATATG  921

seq1  CTTGTGGTTATGGCTTTGTATGTATCTACACTAGAGCTGCAGAAATGTGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGGTTATGGCTTTGTATGTATCTACACTAGAGCTGCAGAAATGTGA  971

seq1  AGGAAGAAGATATAAATGAAAAGGTAGGGAGATGATAGAACAGTAAGATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAGATATAAATGAAAAGGTAGGGAGATGATAGAACAGTAAGATA  1021

seq1  CAGAGAAACAAAGACATCTCTGCATTTTCCTTCCATGAAGTCAATTTTTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACAAAGACATCTCTGCATTTTCCTTCCATGAAGTCAATTTTTG  1071

seq1  CTCTGCCAACAGTACCCAAATATATTACTGGGAATTC  1137
      |||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCAACAGTACCCAAATATATTACTGGGAATTC  1108


seq1: chr13_84593027_84593663
seq2: B6Ng01-255A14.g_67_703

seq1  GAATTCTCTCTAGTGAAGGTCATCTGCAAAAGGATCTGGATGAGTGCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTAGTGAAGGTCATCTGCAAAAGGATCTGGATGAGTGCTGG  50

seq1  GGGTGATGTAAAGAAAACTGGGATTCACAGGCAGGTGCTATCAAGTGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATGTAAAGAAAACTGGGATTCACAGGCAGGTGCTATCAAGTGCAA  100

seq1  CTCCTGTCACCTCAAGAATATCGGCTAGGTAAGCCTGACAGTGTAGGACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTCACCTCAAGAATATCGGCTAGGTAAGCCTGACAGTGTAGGACG  150

seq1  CAGACCCAGCCCTTCTGTGGACATCAGTTTTAATGGGGAGAACATGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCCAGCCCTTCTGTGGACATCAGTTTTAATGGGGAGAACATGACAG  200

seq1  CAGTGTTTGGGGAACTGGAAAAATAAGAATTTTCAGATCAGGTGTCAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTTGGGGAACTGGAAAAATAAGAATTTTCAGATCAGGTGTCAAGA  250

seq1  ATTCTAAACATCAATACTGTTTAAGGAGTGATGGGAAATGCCACTTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAACATCAATACTGTTTAAGGAGTGATGGGAAATGCCACTTGCTT  300

seq1  TCAACTGGAGACCCAGAGCTCCTTTTCCTTGGCAACTTAGATTGAAATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGGAGACCCAGAGCTCCTTTTCCTTGGCAACTTAGATTGAAATGC  350

seq1  TGTCTCTTCTGAAAGGAAAGGTGGAACCTAGTTCTTGCTTGTTTACTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTCTGAAAGGAAAGGTGGAACCTAGTTCTTGCTTGTTTACTGGC  400

seq1  AACCCTGCTAAAATAAACCTCACATGGATCCTGGATAAAATAAACAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCTAAAATAAACCTCACATGGATCCTGGATAAAATAAACAAAAT  450

seq1  AAGCTATAAATGATTTTAAGGATTATTTGAGATATTTGACTATGGGCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAAATGATTTTAAGGATTATTTGAGATATTTGACTATGGGCTCA  500

seq1  TACAAGCTGACGTTATTGAATTTTAAATTCTTGGATGTAATAATTGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGCTGACGTTATTGAATTTTAAATTCTTGGATGTAATAATTGTATA  550

seq1  TTGCATGTCTATAGTGTTAAAATATTTAGGGATAATGTGTCACCTTACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGTCTATAGTGTTAAAATATTTAGGGATAATGTGTCACCTTACAA  600

seq1  TCAACTGATTTTCAAGAGGGTTGAGAAAAATGTGTGT  637
      |||||||||||||||||||||||||||||||||||||
seq2  TCAACTGATTTTCAAGAGGGTTGAGAAAAATGTGTGT  637


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