BAC Information

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BAC

Clone NameB6Ng01-255L24
Chromosome13 (Build37)
Map Location 78,975,615 - 78,976,336
singlet/doubletsinglet
Overlap genenone
Upstream gene1110033M05Rik, 1700013G10Rik, Nr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052
Downstream geneEG666883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255L24.bB6Ng01-255L24.g
ACCGA061882GA061883
length7251,202
definitionB6Ng01-255L24.b B6Ng01-255L24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggccattcctctggttctgagtcaactcagctgcagtatagt
accttacctgcattgtgagccatgcagactatagctaaacctaatgtacc
tactgctaactctactttcagctcattgataaagtattaactattacagc
aagccagggcatcacattcacctttttttcctttctactccatttttgga
aacctgaatgatttaactctaagaatgatgccaaagatcccaggagtaag
caaagaaaaaactaatgttcatgtaaaattcttttgtggttctacacatt
tgaagaagtttaaaaataaaaagggcaaaaacaattaaattagggaggaa
aatacccactaagtgaaagcagagagctcaaattgaaaagaagtacagtg
cctaactgctgtgaatcagataatctctacttctctctctctctctctct
ctctctctctctctctctctctctctctctctctctctctctctctcacg
cagagttacaaccatagacatacactcttcttctatatcgagttttctcg
cgcgcgtgagggaagtgactgtctgtcaccctctctaaaataaacatatg
gggaggtagtggatgggtggcggccctacataaggctttgacttttttcc
aaatcccccaccgactctgagtatcaaaagatttctgacaaggataccca
ctttaagagctcatttaatgtcaaa

gaattccaagcccttgatctttcaaggacgttctaggactgttggaacac
tggtggaaggctttagccatgtcagaattcaattttaaaaagcacttata
ataggaaaatactaaaagagagcacatggatctatacactagactaacgc
ggtaatggaacgcaggaatgaaaaattaatgtatgggtagagaacactag
actccaggaggagagcttccttgaaactcttttgcctcatgagtgacttt
taagcctttcagcttgtctagctgactctaccggagatcgtagcactcca
gaggactttccatgctgcaggcctcctatcacacccaggacttgggatca
ctggtgagtggaaagcagcagagggagtgctctgaccccaggactcagga
ggtggattggagctccagacttctggataccttccctgcaagaaagagga
tagatgacctgcagagattgctctgaccactgggactcaggaaagagttg
gactcccaggatgctgacagaggctaacagaatcccagaagaaacaagct
ccatccagagacagctagaacatctaacaccagagattaccatatggaaa
acggcaaaggtaagaatcttactaacagaaaccaagaccactgggcatca
ccaaaacctagtatgccaaccacagcgagtcctggataccccaacacact
cgaaaagcaccactcggatttaaaatcattatctcatgatgatggtagag
gattttaagaagggcattaataactcaaagaaatacaggaaaacactgct
aaagaggtagaattccttaaagaggaaacacaaaaatcccttaaagaatt
acaggaaaagacaaccaaaaaggtaatggaattgaacaaaagcatcaaag
atctaaaaatggaaatagagacaataaagaaaaccaaagggagacactct
ggagatagtaatcctaggaagaaatcagaaccatagatgtgagcaacaga
ctacaagaaatgagagccttatttatatagccagagctgaaagaaccaga
tgcccctcacagagaatggatacagaaaatgtgttacattaacacaatgc
agtactacctcagccttatcaaaagaattgaattatgaattctaagccat
ggaatgaacttgaaggccatcatctctgaggtgaggtaaccaattctcac
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_78975615_78976336
seq2: B6Ng01-255L24.b_47_771 (reverse)

seq1  TTTGACATTAAATGAGTTCATAAAAT-GGTATCCTGGGAAG-CATTTGTG  48
      |||||||||||||||| || |||| | |||||||| |  ||  || | | 
seq2  TTTGACATTAAATGAGCTCTTAAAGTGGGTATCCTTGTCAGAAATCTTTT  50

seq1  GATACTCAAAATCATTTATGGATTTTGAAAATCAGT-AAGGTCATGTGAA  97
      |||||||| | ||  |   |||||| |||||  ||| || | | | || |
seq2  GATACTCAGAGTCGGTGGGGGATTTGGAAAA-AAGTCAAAGCCTTATGTA  99

seq1  AAACGGGAGAAAATTCCACAACATGAGATAATTTTTAAGAAGTAGAGATT  147
         |  |  |    ||||| || |      || ||||     |||||   
seq2  GGGC-CGCCACCCATCCACTACCTCCCCATATGTTTA--TTTTAGAG---  143

seq1  ATGGAGGCAGGCAG--AGTTCTGAGTTCA---AAGCCAG---ACT-GGTC  188
      | || | ||| |||  | |||     |||     || ||   ||| | | 
seq2  AGGGTGACAGACAGTCACTTC---CCTCACGCGCGCGAGAAAACTCGATA  190

seq1  TA----CAGAGTG-AGTTCCAGGACAGCCAGAGAAACTCTGCCT--GAAA  231
      ||     |||||| |  || | |         | |||||||| |  || |
seq2  TAGAAGAAGAGTGTATGTCTATG------GTTGTAACTCTGCGTGAGAGA  234

seq1  AAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  281
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  284

seq1  GAGAGAGAGAAGTAGAGATTATCTGATTCACAGCAGTTAGGCACTGTACT  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAAGTAGAGATTATCTGATTCACAGCAGTTAGGCACTGTACT  334

seq1  TCTTTTCAATTTGAGCTCTCTGCTTTCACTTAGTGGGTATTTTCCTCCCT  381
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAATTTGAGCTCTCTGCTTTCACTTAGTGGGTATTTTCCTCCCT  384

seq1  AATTTAATTGTTTTTGCCCTTTTTATTTTTAAACTTCTTCAAATGTGTAG  431
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAATTGTTTTTGCCCTTTTTATTTTTAAACTTCTTCAAATGTGTAG  434

seq1  AACCACAAAAGAATTTTACATGAACATTAGTTTTTTCTTTGCTTACTCCT  481
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAAAGAATTTTACATGAACATTAGTTTTTTCTTTGCTTACTCCT  484

seq1  GGGATCTTTGGCATCATTCTTAGAGTTAAATCATTCAGGTTTCCAAAAAT  531
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTTTGGCATCATTCTTAGAGTTAAATCATTCAGGTTTCCAAAAAT  534

seq1  GGAGTAGAAAGGAAAAAAAGGTGAATGTGATGCCCTGGCTTGCTGTAATA  581
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGAAAGGAAAAAAAGGTGAATGTGATGCCCTGGCTTGCTGTAATA  584

seq1  GTTAATACTTTATCAATGAGCTGAAAGTAGAGTTAGCAGTAGGTACATTA  631
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATACTTTATCAATGAGCTGAAAGTAGAGTTAGCAGTAGGTACATTA  634

seq1  GGTTTAGCTATAGTCTGCATGGCTCACAATGCAGGTAAGGTACTATACTG  681
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGCTATAGTCTGCATGGCTCACAATGCAGGTAAGGTACTATACTG  684

seq1  CAGCTGAGTTGACTCAGAACCAGAGGAATGGCCAAGAATTC  722
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGAGTTGACTCAGAACCAGAGGAATGGCCAAGAATTC  725


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