BAC Information

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BAC

Clone NameB6Ng01-256I08
Chromosome13 (Build37)
Map Location 70,138,109 - 70,276,868
singlet/doubletdoublet
Overlap geneEG620143, LOC100042291
Upstream geneAdcy2, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik, 4930547H16Rik, Med10
Downstream gene4930520P13Rik, EG633042, BC018507, EG620473, Adamts16, 8030423J24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256I08.bB6Ng01-256I08.g
ACCGA062457GA062458
length1,1051,025
definitionB6Ng01-256I08.b B6Ng01-256I08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,138,109 - 70,139,206)(70,275,852 - 70,276,868)
sequence
gaattctttctgatctgttatttggttttaactgcaagccattctcctct
tctgaataaaagattatttccttacttactggtttataaccgactttgtg
ctaggtactattttaacactgtatctttgagggactcatcctctggagcc
ggcaggagactcgagagacctgaacaagcaaatgtgcacacagcattctg
gatgcaggtgattgggagggaaggcaggcatggctgggggaagaaggtgg
gctactagttcatagactggaggcaagaaaggcctcagcgtgtgatattg
ttgaatcctagaatggaagaagggagggacaggctgtgataatctatttg
atgaatgcactggtttgtagaagcctctgggattctcatcatagccatct
ttactaaggatgttatcttttgcttttcctcttgctcctagtcatgcccc
cccgacccagtgtcagctgaattacaagtttccttttctgtacattttat
tccattctaatgattctcgatattaccctcattatcttttcagactgatc
actttcagaaaggtagaatatggggccagtggaatgggtaaaggtgctta
ttgtcagagaatcctttaccagaggctactgagaattgggttcctgaaag
gaaagctggggtagtatgggatagatggcaagagaagaatgagaccaaga
caaagtttctgatcaaggcccagtgtttactttttgagtttgaacttaaa
aaggggggaaacccatcccccactatgccaggttaaaacaacaagctcag
ctgctcagcaggtagtagtgtcttggagggagctgcagatgtggcagaca
atagactttacttaggtgggctagccagctgtggccaaaaaacaaggtct
gattcagcccactcaaggctgggggacaagtacatccctgtgtctgtgtg
gactgacagaattttagatcagaaaaaaaatgtgcatgggggggtgataa
gaacactgagcttaaattttacccttgacagactctgaaatcatctggga
agagtctcatctgagggactgccaatgcacgctttattccagcactggga
aggca
gaattcactcacttagtgttttggggtagcttgatgggacatggttaccc
tgagtagtgagacaagactatgtctgtcattttaataaaaacttctacaa
tttaattcatagagagagtagttttgacttgtctgcttcaatggccctca
catccttgactgtccctctaacagggcatgggaatgatgaagaagttcag
tcatttctcccgttgagaaatggggtctgcagacagaataccaatgactt
tgaagtcttgctaagtttcacttcaagtagcaaatgaagcacaaacctca
cttgaaggaaattgaaaatagacatgcagctaccacggcagcttgtagat
gtctggagaagattagttacggtctagcccttggaagagattcgtaacat
gatgcaaattatagtaagtgagaatatatacatcaggagaattggaaatg
cctgacattagagcgtcacagaattcacccgcaaatcccctgaaaacttc
tggaagagtcaatgaagaaggaagaagaaactggcagcaagaattgatca
ctagaagctttagaagtaaggtatttgttttatcaggccactcgtgtctc
aggctcatcttgaattcattctgcagctcagcttggactgcaaggaggat
aggtgtgtatcaccatggctgtttgtatttgatgctgcaaatggagctca
gggctttgcgtgttgtcagctaagctactacccactcagttccatcccta
gctctagaacgggctgtcaacattcataggggcaaaccttcatgtcactg
tctgggtttggacagacttacagaattgggaaatctttaaagggtgggcc
actgcagtgtcttgatgaccacaaacgatcctggaaatcaggaaaaataa
aaaggaaaatgaagaaataaatcctgaggaacaacaagcaagctcctggg
gggatctgtatgaaacccgacagtcttccacactgtagaaagaaggcaat
tcctttggtgtgctcattattgatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_70138109_70139206
seq2: B6Ng01-256I08.b_44_1148

seq1  GAATTCTTTCTGATCTGTTATTTGGTTTTAACTGCAAGCCATTCTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTGATCTGTTATTTGGTTTTAACTGCAAGCCATTCTCCTCT  50

seq1  TCTGAATAAAAGATTATTTCCTTACTTACTGGTTTATAACCGACTTTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATAAAAGATTATTTCCTTACTTACTGGTTTATAACCGACTTTGTG  100

seq1  CTAGGTACTATTTTAACACTGTATCTTTGAGGGACTCATCCTCTGGAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTACTATTTTAACACTGTATCTTTGAGGGACTCATCCTCTGGAGCC  150

seq1  GGCAGGAGACTCGAGAGACCTGAACAAGCAAATGTGCACACAGCATTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGAGACTCGAGAGACCTGAACAAGCAAATGTGCACACAGCATTCTG  200

seq1  GATGCAGGTGATTGGGAGGGAAGGCAGGCATGGCTGGGGGAAGAAGGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGGTGATTGGGAGGGAAGGCAGGCATGGCTGGGGGAAGAAGGTGG  250

seq1  GCTACTAGTTCATAGACTGGAGGCAAGAAAGGCCTCAGCGTGTGATATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTAGTTCATAGACTGGAGGCAAGAAAGGCCTCAGCGTGTGATATTG  300

seq1  TTGAATCCTAGAATGGAAGAAGGGAGGGACAGGCTGTGATAATCTATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCTAGAATGGAAGAAGGGAGGGACAGGCTGTGATAATCTATTTG  350

seq1  ATGAATGCACTGGTTTGTAGAAGCCTCTGGGATTCTCATCATAGCCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCACTGGTTTGTAGAAGCCTCTGGGATTCTCATCATAGCCATCT  400

seq1  TTACTAAGGATGTTATCTTTTGCTTTTCCTCTTGCTCCTAGTCATGCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAGGATGTTATCTTTTGCTTTTCCTCTTGCTCCTAGTCATGCCCC  450

seq1  CCCGACCCAGTGTCAGCTGAATTACAAGTTTCCTTTTCTGTACATTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGACCCAGTGTCAGCTGAATTACAAGTTTCCTTTTCTGTACATTTTAT  500

seq1  TCCATTCTAATGATTCTCGATATTACCCTCATTATCTTTTCAGACTGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTAATGATTCTCGATATTACCCTCATTATCTTTTCAGACTGATC  550

seq1  ACTTTCAGAAAGGTAGAATATGGGGCCAGTGGAATGGGTAAAGGTGCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGAAAGGTAGAATATGGGGCCAGTGGAATGGGTAAAGGTGCTTA  600

seq1  TTGTCAGAGAATCCTTTACCAGAGGCTACTGAGAATTGGGTTCCTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGAGAATCCTTTACCAGAGGCTACTGAGAATTGGGTTCCTGAAAG  650

seq1  GAAAGCTGGGGTAGTATGGGATAGATGGCAAGAGAAGAATGAGACCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGGGGTAGTATGGGATAGATGGCAAGAGAAGAATGAGACCAAGA  700

seq1  CAAAGTTTCTGATCAAGGCCCAGTGTTTACTTTTTGAGTTTGAACTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTCTGATCAAGGCCCAGTGTTTACTTTTTGAGTTTGAACTTAAA  750

seq1  AAGGGGGGAAACCCATCCCCCACTATGCCAGGTTAAAACAACAAGCTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGGGGGGAAACCCATCCCCCACTATGCCAGGTTAAAACAACAAGCTCA-  799

seq1  GCTGCTCAGCAGGTAGTAGTGTCTTGGAGGGAGCTGCAGATGTGGCAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTCAGCAGGTAGTAGTGTCTTGGAGGGAGCTGCAGATGTGGCAGAC  849

seq1  AATAGACTTTACTTAGGTGGGCTAGCCAGCTGTGG-CAAAAAACAAGGTC  899
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AATAGACTTTACTTAGGTGGGCTAGCCAGCTGTGGCCAAAAAACAAGGTC  899

seq1  TGATTCAGCCCACTCAAGGCTGGGGGAC-AGTACAT-CCTGTGTCTGTGT  947
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  TGATTCAGCCCACTCAAGGCTGGGGGACAAGTACATCCCTGTGTCTGTGT  949

seq1  GGACTGACAGAA-TTTAGATCAGAAAAAAAATGTGCAT--GGGGGTGATA  994
      |||||||||||| |||||||||||||||||||||||||  ||||||||||
seq2  GGACTGACAGAATTTTAGATCAGAAAAAAAATGTGCATGGGGGGGTGATA  999

seq1  AG-ACACTGAGCTTAAATTTTA-CCTTGACAGACTCTGAAATCATCTGGG  1042
      || ||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAACACTGAGCTTAAATTTTACCCTTGACAGACTCTGAAATCATCTGGG  1049

seq1  AAGAGTCTCA-CTGAGGGACTG-CGATGCACGCCTTTAATCCCAGCACTT  1090
      |||||||||| ||||||||||| | ||||||||  || || |||||||| 
seq2  AAGAGTCTCATCTGAGGGACTGCCAATGCACGC--TTTATTCCAGCACTG  1097

seq1  GGGAGGCA  1098
      || |||||
seq2  GGAAGGCA  1105

seq1: chr13_70275852_70276868
seq2: B6Ng01-256I08.g_68_1092 (reverse)

seq1  CATCAATAATGAGCACA-CAAAGGAATTGCCT--CTTCTACAGTGTGGAA  47
      ||||||||||||||||| ||||||||||||||   |||||||||||||||
seq2  CATCAATAATGAGCACACCAAAGGAATTGCCTTCTTTCTACAGTGTGGAA  50

seq1  GACTGTCGGGTTTCATACAGAT-CCCCCAGGAGCTTGCTTG-TGTTCCTC  95
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  GACTGTCGGGTTTCATACAGATCCCCCCAGGAGCTTGCTTGTTGTTCCTC  100

seq1  AGGATTTATTTCTTCATTTTCCTTTTTATTTTTCCTGA-TTCCAGGATCG  144
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGATTTATTTCTTCATTTTCCTTTTTATTTTTCCTGATTTCCAGGATCG  150

seq1  TTTGTGGTCATCAAGACACTGCAGTGG-CCACCCCTTAAAGATTT-CCAA  192
      ||||||||||||||||||||||||||| |||||| |||||||||| ||||
seq2  TTTGTGGTCATCAAGACACTGCAGTGGCCCACCCTTTAAAGATTTCCCAA  200

seq1  TTCTGTAAGTCTGTCCAAACCCAGACAGTGACATGAAGGTTTGCCCCTAT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAAGTCTGTCCAAACCCAGACAGTGACATGAAGGTTTGCCCCTAT  250

seq1  GAATGTTGACAGCCCGTTCTAGAGCTAGGGATGGAACTGAGTGGGTAGTA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTGACAGCCCGTTCTAGAGCTAGGGATGGAACTGAGTGGGTAGTA  300

seq1  GCTTAGCTGACAACACGCAAAGCCCTGAGCTCCATTTGCAGCATCAAATA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGCTGACAACACGCAAAGCCCTGAGCTCCATTTGCAGCATCAAATA  350

seq1  CAAACAGCCATGGTGATACACACCTATCCTCCTTGCAGTCCAAGCTGAGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGCCATGGTGATACACACCTATCCTCCTTGCAGTCCAAGCTGAGC  400

seq1  TGCAGAATGAATTCAAGATGAGCCTGAGACACGAGTGGCCTGATAAAACA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATGAATTCAAGATGAGCCTGAGACACGAGTGGCCTGATAAAACA  450

seq1  AATACCTTACTTCTAAAGCTTCTAGTGATCAATTCTTGCTGCCAGTTTCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTTACTTCTAAAGCTTCTAGTGATCAATTCTTGCTGCCAGTTTCT  500

seq1  TCTTCCTTCTTCATTGACTCTTCCAGAAGTTTTCAGGGGATTTGCGGGTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCTTCATTGACTCTTCCAGAAGTTTTCAGGGGATTTGCGGGTG  550

seq1  AATTCTGTGACGCTCTAATGTCAGGCATTTCCAATTCTCCTGATGTATAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTGACGCTCTAATGTCAGGCATTTCCAATTCTCCTGATGTATAT  600

seq1  ATTCTCACTTACTATAATTTGCATCATGTTACGAATCTCTTCCAAGGGCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCACTTACTATAATTTGCATCATGTTACGAATCTCTTCCAAGGGCT  650

seq1  AGACCGTAACTAATCTTCTCCAGACATCTACAAGCTGCCGTGGTAGCTGC  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGTAACTAATCTTCTCCAGACATCTACAAGCTGCCGTGGTAGCTGC  700

seq1  ATGTCTATTTTCAATTTCCTTCAAGTGAGGTTTGTGCTTCATTTGCTACT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTATTTTCAATTTCCTTCAAGTGAGGTTTGTGCTTCATTTGCTACT  750

seq1  TGAAGTGAAACTTAGCAAGACTTCAAAGTCATTGGTATTCTGTCTGCAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTGAAACTTAGCAAGACTTCAAAGTCATTGGTATTCTGTCTGCAGA  800

seq1  CCCCATTTCTCAACGGGAGAAATGACTGAACTTCTTCATCATTCCCATGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTTCTCAACGGGAGAAATGACTGAACTTCTTCATCATTCCCATGC  850

seq1  CCTGTTAGAGGGACAGTCAAGGATGTGAGGGCCATTGAAGCAGACAAGTC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTAGAGGGACAGTCAAGGATGTGAGGGCCATTGAAGCAGACAAGTC  900

seq1  AAAACTACTCTCTCTATGAATTAAATTGTAGAAGTTTTTATTAAAATGAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTACTCTCTCTATGAATTAAATTGTAGAAGTTTTTATTAAAATGAC  950

seq1  AGACATAGTCTTGTCTCACTACTCAGGGTAACCATGTCCCATCAAGCTAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAGTCTTGTCTCACTACTCAGGGTAACCATGTCCCATCAAGCTAC  1000

seq1  CCCAAAACACTAAGTGAGTGAATTC  1017
      |||||||||||||||||||||||||
seq2  CCCAAAACACTAAGTGAGTGAATTC  1025