BAC Information

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BAC

Clone NameB6Ng01-256K13
Chromosome13 (Build37)
Map Location 15,466,694 - 15,467,747
singlet/doubletsinglet
Overlap genenone
Upstream geneHecw1, Mrpl32, Psma2, AW209491, EG665099, LOC670994
Downstream geneEG625121, Gli3, LOC665157, Inhba, LOC625181
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256K13.bB6Ng01-256K13.g
ACCGA062560GA062561
length1,1681,051
definitionB6Ng01-256K13.b B6Ng01-256K13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaactcaattcttcatggagttagaaagagcaatttgcaaattc
atttggaatttaaaaaaacaaaaacaaacaaacaaacaggatatagaaag
ctattctcaacaaataaaagaacttctggaggaatcaccacccctgacct
taagctgtattacagagcaatagtaagaaaaactgcatggtactggtaca
gtgacagacaggtagatcaatggaagagaactgaagacccagaaatgaac
ccacacacctatggtcacttgatctttgacaaaggagctaaaaccaccca
gttgaaaaaaagacagtattttcaactaatggtgctggatcaactggtgg
tcagcatgtagaagaatgcaaattgatccattcttatctccttgtacaaa
gctgaagtccaagtggatcaaggacctccacataaaaccagatacactga
aactaacagaagagaaagtgggaaaaagtctggaacacatgggcacaggg
taaattttcctgaatagaacaccaatgatttatgctctaagaccaataat
agacaaatggtacctcataaaattgcaaagctgctgtaagccaaaggaca
ctgtccatagaacaaaacagcagccaacaaattgtgaaaaagatctttac
caatcatacatccttttatcttttcaatgatcctacatggataaacttga
aatgtactgtgggggtgggaataggggaacaaagtgtgggaaaatatgtt
ataatttatttaaaataagcagaagaataagtactaaaagttcttctgcc
ctaaacagggcatgttttaaaacttaagtcagatttacatttaaaggatc
taaagaaaagttttgttttatatatgaaatctgtttctaaaagcatgttc
atgtttgcaagagaaagcagtgaagaaaaggttgacaggcccaactttta
atcgctctgacatctcaagtctgctgaaactctcagctttacagcagccc
tctatagtgaaaagacaaatctgcaaaaccagctccgaacatgagactgt
ctgttcagctgaatgttctagagcctaaaacaatgtatccagagtttctg
ggtataagaatttaatgaatctctaatgactgtccaaatatctacctctt
gtaaaacaaaagccttcg
gaattcaaaagaggaagtgagagaaagtggtttgttattatttaaaatgt
tagtagctgtgaacagattaaaggtatcaagccatcagtttaaaaagaac
cagatgaactataactgggatagaattgtaagacctcaaggtaaaacaga
aaactaaggaagtaagaaaacttgtcagagaaacagaagtagttgctgtc
tacagagtgatgttttgacttctaacttccaaacagaaagagtaagatct
aaacccaatagaaaaatatacctgaagaaacaaaaaagaaaaatctccag
gacattggtagtatacaatcagccacctaaacctgaaactaataagatga
cagagaataatgacgatagcaagttaagccaccattaagtaggcctgcat
cacaaataagaaacaatgcattccacaaactgtgcagagcagataaagtc
ctgagtgaattcgtattgacgtgagcacatctatgtctagggcctcagtg
tcaaagactaccaggtcaggaccagagaaatggcaaccaagtcttccact
gttatgtatatggataatgacaaggtgtgcagaaaatacagacagcagtc
tccggatggttatagcctgaatctgctcctctgtagagacctcctactga
gattagctaaacctgcctcctcattcagctgcatgcaataaacctgcctc
ttccattcatacagatgaaacacacacacacactagagttcccaggcttc
tggtgcatctccatgacagtgttaaaaatctttctctcagaataagttta
tatctgaattaagaaatgctaaataagtctgagacctggctagacctggg
aatagaggaaaggagaaggaaagaaccacagagactggcatctcaggaag
gtaccactttgggaggtaagtggtaccacttttctgaagcaatagttgta
tttttatagtctcggtggtcatgggaaatagaaatgtttagcagtgaaaa
ttaaggccttcagaaagaaaaaaaaccactctcaaatcggaaaacatgaa
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15466694_15467747
seq2: B6Ng01-256K13.g_66_1116

seq1  GAATTCAAAAGAGGAAGTGAGAGAAAGTGGTTTGTTATTATTTAAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAAGAGGAAGTGAGAGAAAGTGGTTTGTTATTATTTAAAATGT  50

seq1  TAGTAGCTGTGAACAGATTAAAGGTATCAAGCCATCAGTTTAAAAAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGCTGTGAACAGATTAAAGGTATCAAGCCATCAGTTTAAAAAGAAC  100

seq1  CAGATGAACTATAACTGGGATAGAATTGTAAGACCTCAAGGTAAAACAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGAACTATAACTGGGATAGAATTGTAAGACCTCAAGGTAAAACAGA  150

seq1  AAACTAAGGAAGTAAGAAAACTTGTCAGAGAAACAGAAGTAGTTGCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGGAAGTAAGAAAACTTGTCAGAGAAACAGAAGTAGTTGCTGTC  200

seq1  TACAGAGTGATGTTTTGACTTCTAACTTCCAAACAGAAAGAGTAAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTGATGTTTTGACTTCTAACTTCCAAACAGAAAGAGTAAGATCT  250

seq1  AAACCCAATAGAAAAATATACCTGAAGAAACAAAAAAGAAAAATCTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAATAGAAAAATATACCTGAAGAAACAAAAAAGAAAAATCTCCAG  300

seq1  GACATTGGTAGTATACAATCAGCCACCTAAACCTGAAACTAATAAGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGGTAGTATACAATCAGCCACCTAAACCTGAAACTAATAAGATGA  350

seq1  CAGAGAATAATGACGATAGCAAGTTAAGCCACCATTAAGTAGGCCTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATAATGACGATAGCAAGTTAAGCCACCATTAAGTAGGCCTGCAT  400

seq1  CACAAATAAGAAACAATGCATTCCACAAACTGTGCAGAGCAGATAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATAAGAAACAATGCATTCCACAAACTGTGCAGAGCAGATAAAGTC  450

seq1  CTGAGTGAATTCGTATTGACGTGAGCACATCTATGTCTAGGGCCTCAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGAATTCGTATTGACGTGAGCACATCTATGTCTAGGGCCTCAGTG  500

seq1  TCAAAGACTACCAGGTCAGGACCAGAGAAATGGCAACCAAGTCTTCCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGACTACCAGGTCAGGACCAGAGAAATGGCAACCAAGTCTTCCACT  550

seq1  GTTATGTATATGGATAATGACAAGGTGTGCAGAAAATACAGACAGCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTATATGGATAATGACAAGGTGTGCAGAAAATACAGACAGCAGTC  600

seq1  TCCGGATGGTTATAGCCTGAATCTGCTCCTCTGTAGAGACCTCCTACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGATGGTTATAGCCTGAATCTGCTCCTCTGTAGAGACCTCCTACTGA  650

seq1  GATTAGCTAAACCTGCCTCCTCATTCAGCTGCATGCAATAAACCTGCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGCTAAACCTGCCTCCTCATTCAGCTGCATGCAATAAACCTGCCTC  700

seq1  TTCCATTCATACAGATGAAACACACACACACACTAGAGTTCCCAGGCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTCATACAGATGAAACACACACACACACTAGAGTTCCCAGGCTTC  750

seq1  TGGTGCATCTCCATGACAGTGTTAAAAATCTTTCTCTCAGAATAAGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCATCTCCATGACAGTGTTAAAAATCTTTCTCTCAGAATAAGTTTA  800

seq1  TATCTGAATTAAGAAATGCTAAATAAGTCTGAGACCTGGCTAGACCTGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGAATTAAGAAATGCTAAATAAGTCTGAGACCTGGCTAGACCTGGG  850

seq1  AATAGAGGAAAGGAGAAGGAAAGAACCACAGAGACTGGCATCTCAGGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGGAAAGGAGAAGGAAAGAACCACAGAGACTGGCATCTCAGGAAG  900

seq1  GTACCACTTT-GGAGGTAAGTGGTACCACTTTTCTGAAAGCAATAGTTGT  949
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  GTACCACTTTGGGAGGTAAGTGGTACCACTTTTCTG-AAGCAATAGTTGT  949

seq1  A-TTTTATAGTCTCGGTGGTCATGGGAAATAAGAAATGTTTAGCAGTGAA  998
      | |||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATTTTTATAGTCTCGGTGGTCATGGGAAAT-AGAAATGTTTAGCAGTGAA  998

seq1  AATTAAAGGCCTTCAGAAAGAAAAAAAAAACACTCTCAAATTCGGAAAAC  1048
      |||| ||||||||||||||| |||||||| |||||||||| |||||||||
seq2  AATT-AAGGCCTTCAGAAAG-AAAAAAAACCACTCTCAAA-TCGGAAAAC  1045

seq1  ATGAAA  1054
      ||||||
seq2  ATGAAA  1051